BLASTX nr result
ID: Coptis25_contig00009128
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00009128
(893 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAJ95761.1| predicted protein [Hordeum vulgare subsp. vulgare] 57 5e-12
dbj|BAJ85522.1| predicted protein [Hordeum vulgare subsp. vulgare] 57 5e-12
ref|XP_002437735.1| hypothetical protein SORBIDRAFT_10g001530 [S... 56 8e-12
dbj|BAD67732.1| putative sexual differentiation process protein ... 54 2e-11
gb|EEC79904.1| hypothetical protein OsI_21444 [Oryza sativa Indi... 54 2e-11
>dbj|BAJ95761.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 664
Score = 56.6 bits (135), Expect(2) = 5e-12
Identities = 43/124 (34%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Frame = -1
Query: 662 HKAFPDKKWLRLINKPVLLGATEIXXXXXXXXXXTVQAGSSWPLSLWLCCI*VQLY*HD* 483
HKAFPD+ W+ LIN PVL+G+T +W +L V Y D
Sbjct: 547 HKAFPDQNWILLINMPVLIGSTGQMPPATAVNYI------TWIFVGFLSGYVVYRYRRDW 600
Query: 482 LMRHNYVGSHCLEYLMQAWHLCGYWCIVLGDGAFQARLLGVDL------NCPTTEGIFLE 321
RHNY+ S L+ + + Y C LG G DL +CPT +GIF+E
Sbjct: 601 WERHNYLLSGALDAGLAFMAVLIYLC--LGLENISLNWWGNDLDGCPLASCPTAKGIFVE 658
Query: 320 ACPV 309
CPV
Sbjct: 659 GCPV 662
Score = 40.8 bits (94), Expect(2) = 5e-12
Identities = 24/51 (47%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = -2
Query: 817 WTSLGDHVFYDASDL-GCEQATPICLEI*ILGLYSSMSWLILVGAIVPHLI 668
WT GDHVFYDAS + G I + LG YS+++W L GAI P L+
Sbjct: 496 WTCPGDHVFYDASVIWGLISPRRIFGD---LGTYSAVNWFFLGGAIAPLLV 543
>dbj|BAJ85522.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 648
Score = 56.6 bits (135), Expect(2) = 5e-12
Identities = 43/124 (34%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Frame = -1
Query: 662 HKAFPDKKWLRLINKPVLLGATEIXXXXXXXXXXTVQAGSSWPLSLWLCCI*VQLY*HD* 483
HKAFPD+ W+ LIN PVL+G+T +W +L V Y D
Sbjct: 531 HKAFPDQNWILLINMPVLIGSTGQMPPATAVNYI------TWIFVGFLSGYVVYRYRRDW 584
Query: 482 LMRHNYVGSHCLEYLMQAWHLCGYWCIVLGDGAFQARLLGVDL------NCPTTEGIFLE 321
RHNY+ S L+ + + Y C LG G DL +CPT +GIF+E
Sbjct: 585 WERHNYLLSGALDAGLAFMAVLIYLC--LGLENISLNWWGNDLDGCPLASCPTAKGIFVE 642
Query: 320 ACPV 309
CPV
Sbjct: 643 GCPV 646
Score = 40.8 bits (94), Expect(2) = 5e-12
Identities = 24/51 (47%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = -2
Query: 817 WTSLGDHVFYDASDL-GCEQATPICLEI*ILGLYSSMSWLILVGAIVPHLI 668
WT GDHVFYDAS + G I + LG YS+++W L GAI P L+
Sbjct: 480 WTCPGDHVFYDASVIWGLISPRRIFGD---LGTYSAVNWFFLGGAIAPLLV 527
>ref|XP_002437735.1| hypothetical protein SORBIDRAFT_10g001530 [Sorghum bicolor]
gi|241915958|gb|EER89102.1| hypothetical protein
SORBIDRAFT_10g001530 [Sorghum bicolor]
Length = 785
Score = 55.8 bits (133), Expect(2) = 8e-12
Identities = 42/124 (33%), Positives = 57/124 (45%), Gaps = 6/124 (4%)
Frame = -1
Query: 662 HKAFPDKKWLRLINKPVLLGATEIXXXXXXXXXXTVQAGSSWPLSLWLCCI*VQLY*HD* 483
HKAFP + W+ LIN PV++GAT + ++W L +L V Y D
Sbjct: 668 HKAFPSQSWILLINMPVMIGATGMMPPATAVNY------TTWILVGFLSGYVVYRYRRDW 721
Query: 482 LMRHNYVGSHCLEYLMQAWHLCGYWCIVLGDGAFQARLLGVDL------NCPTTEGIFLE 321
RHNY+ S L+ + + Y C LG G DL +CPT +GI +E
Sbjct: 722 WERHNYLLSGALDAGLAFMAVLIYLC--LGLENISLNWWGNDLDGCPLSSCPTAKGIVVE 779
Query: 320 ACPV 309
CPV
Sbjct: 780 GCPV 783
Score = 40.8 bits (94), Expect(2) = 8e-12
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = -2
Query: 835 VPCYHRWTSLGDHVFYDASDL-GCEQATPICLEI*ILGLYSSMSWLILVGAIVPHLI 668
+P WT GDHVFYDAS + G I + LG YS+++W L GA+ P L+
Sbjct: 611 LPSDSPWTCPGDHVFYDASVIWGLISPRRIFGD---LGTYSAVNWFFLGGAVAPLLV 664
>dbj|BAD67732.1| putative sexual differentiation process protein isp4 [Oryza sativa
Japonica Group]
Length = 763
Score = 53.9 bits (128), Expect(2) = 2e-11
Identities = 42/124 (33%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Frame = -1
Query: 662 HKAFPDKKWLRLINKPVLLGATEIXXXXXXXXXXTVQAGSSWPLSLWLCCI*VQLY*HD* 483
HKAFP++ W+ LIN PVL+GAT T ++W L +L V Y D
Sbjct: 646 HKAFPNQNWILLINMPVLIGAT------GQMPPATAVNYTTWILVGFLSGYVVYRYRRDW 699
Query: 482 LMRHNYVGSHCLEYLMQAWHLCGYWCIVLGDGAFQARLLGVDL------NCPTTEGIFLE 321
RHNY+ S L+ + + Y C LG G DL +CPT +G+ ++
Sbjct: 700 WERHNYLLSGALDAGLAFMAVLIYLC--LGLENISLNWWGNDLDGCPLASCPTAKGVVVD 757
Query: 320 ACPV 309
CPV
Sbjct: 758 GCPV 761
Score = 41.2 bits (95), Expect(2) = 2e-11
Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = -2
Query: 835 VPCYHRWTSLGDHVFYDASDL-GCEQATPICLEI*ILGLYSSMSWLILVGAIVPHLI 668
+P WT GDHVFYDAS + G I + LG YS+++W L GAI P L+
Sbjct: 589 LPSDSPWTCPGDHVFYDASVIWGLISPRRIFGD---LGTYSAVNWFFLGGAIAPVLV 642
>gb|EEC79904.1| hypothetical protein OsI_21444 [Oryza sativa Indica Group]
gi|222634875|gb|EEE65007.1| hypothetical protein
OsJ_19952 [Oryza sativa Japonica Group]
Length = 758
Score = 53.9 bits (128), Expect(2) = 2e-11
Identities = 42/124 (33%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Frame = -1
Query: 662 HKAFPDKKWLRLINKPVLLGATEIXXXXXXXXXXTVQAGSSWPLSLWLCCI*VQLY*HD* 483
HKAFP++ W+ LIN PVL+GAT T ++W L +L V Y D
Sbjct: 641 HKAFPNQNWILLINMPVLIGAT------GQMPPATAVNYTTWILVGFLSGYVVYRYRRDW 694
Query: 482 LMRHNYVGSHCLEYLMQAWHLCGYWCIVLGDGAFQARLLGVDL------NCPTTEGIFLE 321
RHNY+ S L+ + + Y C LG G DL +CPT +G+ ++
Sbjct: 695 WERHNYLLSGALDAGLAFMAVLIYLC--LGLENISLNWWGNDLDGCPLASCPTAKGVVVD 752
Query: 320 ACPV 309
CPV
Sbjct: 753 GCPV 756
Score = 41.2 bits (95), Expect(2) = 2e-11
Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = -2
Query: 835 VPCYHRWTSLGDHVFYDASDL-GCEQATPICLEI*ILGLYSSMSWLILVGAIVPHLI 668
+P WT GDHVFYDAS + G I + LG YS+++W L GAI P L+
Sbjct: 584 LPSDSPWTCPGDHVFYDASVIWGLISPRRIFGD---LGTYSAVNWFFLGGAIAPVLV 637