BLASTX nr result

ID: Coptis25_contig00009118 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009118
         (1250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517541.1| Gibberellin 20 oxidase, putative [Ricinus co...   301   3e-79
ref|XP_002284968.1| PREDICTED: gibberellin 20 oxidase 3 [Vitis v...   301   3e-79
ref|XP_002284974.1| PREDICTED: gibberellin 20 oxidase 1 [Vitis v...   300   4e-79
emb|CAN80139.1| hypothetical protein VITISV_028513 [Vitis vinifera]   300   4e-79
ref|XP_002280670.1| PREDICTED: gibberellin 3-beta-dioxygenase 3 ...   300   5e-79

>ref|XP_002517541.1| Gibberellin 20 oxidase, putative [Ricinus communis]
            gi|223543173|gb|EEF44705.1| Gibberellin 20 oxidase,
            putative [Ricinus communis]
          Length = 314

 Score =  301 bits (770), Expect = 3e-79
 Identities = 158/316 (50%), Positives = 208/316 (65%), Gaps = 4/316 (1%)
 Frame = -3

Query: 1212 MGSISSDKIPAIVFYRKDLRPGTPSWCSVRDEIRQALELYGCFEAAFGGTQ--LHPEMLG 1039
            MGS +  K+PAI F  ++L+PGT  W  V+ ++R ALE YGCFEA F      L   + G
Sbjct: 1    MGSETPLKLPAIDFSTENLKPGTVEWELVKTQVRNALEEYGCFEAFFSRVHNDLKKGVFG 60

Query: 1038 ELEKLFGLSSETKNKYTLNDVFEGYNGSYSNMPLLESISFDDVPVIERLQSFTDLMWPEG 859
             +E+LF L  +TK K      F GY G Y   PL ES+  +D   +E+++SFT ++WP+G
Sbjct: 61   AIEELFELPLQTKLKNVSRKPFHGYVGQYPQAPLYESMGIEDPDTVEKVESFTSVLWPQG 120

Query: 858  NSNFCDILCSYVRQVSELELMVKRMIFESFGLERDFNATEKSTSYHLRAMRYMAPKTNEP 679
            N  F   + S+  QVS+L+ +V+RMI ES GLE+  +    ST Y LR M+Y  P+T+E 
Sbjct: 121  NLTFSKTVQSFSEQVSKLDKVVRRMIVESLGLEKYMDEHMNSTDYLLRVMKYKGPETSEA 180

Query: 678  NLGIDTHTDASFLTILNQNQVHGLEVQTKKGEWISVKPAPSSYVVMIGDACMAWSNCRLH 499
             LG+  HTD + +TIL QNQV GLEV+TK GEWI+VK +P S+VVMIGD+ +AW+N RLH
Sbjct: 181  KLGLHPHTDKNIVTILFQNQVDGLEVKTKNGEWITVKLSPDSFVVMIGDSLLAWANGRLH 240

Query: 498  NPIHRVMMRGDAIRYSIGLLSYAKG--ITQTPEELVDEEHPLLFKPFNHLGYHQFIVGED 325
            +P HRVMM G+  RYS GL S  K   I + PEELVDEEHPLLFKPF+H+ +  F   E 
Sbjct: 241  SPYHRVMMTGNEARYSCGLFSIPKAGYIVKAPEELVDEEHPLLFKPFDHVEFLGFYYTE- 299

Query: 324  RKGLKHASAMKAYCGV 277
              G +  SA+KAYCGV
Sbjct: 300  -AGQRAQSALKAYCGV 314


>ref|XP_002284968.1| PREDICTED: gibberellin 20 oxidase 3 [Vitis vinifera]
            gi|297743335|emb|CBI36202.3| unnamed protein product
            [Vitis vinifera]
          Length = 314

 Score =  301 bits (770), Expect = 3e-79
 Identities = 153/316 (48%), Positives = 208/316 (65%), Gaps = 4/316 (1%)
 Frame = -3

Query: 1212 MGSISSDKIPAIVFYRKDLRPGTPSWCSVRDEIRQALELYGCFEAAFGGT--QLHPEMLG 1039
            MGS +  K+P I F   +L+PGT  W  V+ ++++ALE YGCFEA F      L   + G
Sbjct: 1    MGSETPLKLPVIDFSDPELKPGTLQWNLVKAQVQKALEEYGCFEAFFNKVPLDLRKAIFG 60

Query: 1038 ELEKLFGLSSETKNKYTLNDVFEGYNGSYSNMPLLESISFDDVPVIERLQSFTDLMWPEG 859
             LE+LF L  +TK + +    + GY G Y  +PL ES+  DD  V E+ + FT L+WPEG
Sbjct: 61   ALEELFDLPLQTKLRNSSKKPYHGYVGQYPTVPLYESMGIDDALVQEKAEHFTKLLWPEG 120

Query: 858  NSNFCDILCSYVRQVSELELMVKRMIFESFGLERDFNATEKSTSYHLRAMRYMAPKTNEP 679
            N NFC  + S+  Q+SEL+  ++RM+ ES G+E+  +    ST+Y LR M+Y  P+T E 
Sbjct: 121  NPNFCKTIQSFSEQLSELDHTIRRMVLESLGMEKYLDEHMDSTNYLLRVMKYKGPQTTET 180

Query: 678  NLGIDTHTDASFLTILNQNQVHGLEVQTKKGEWISVKPAPSSYVVMIGDACMAWSNCRLH 499
             LG++ HTD + +TIL QNQV GL VQTK G+WI++K +P S+++MIGD+ +AW+N RLH
Sbjct: 181  KLGLNAHTDKNIVTILYQNQVDGLGVQTKDGQWINIKCSPDSFIIMIGDSFLAWTNGRLH 240

Query: 498  NPIHRVMMRGDAIRYSIGLLSYAKG--ITQTPEELVDEEHPLLFKPFNHLGYHQFIVGED 325
            +P HRVMM G+  RYS GL S  K   + + PEELVDEEHPLLFKPF+HL + QF   E 
Sbjct: 241  SPYHRVMMTGNESRYSTGLFSIPKAGYVIKAPEELVDEEHPLLFKPFDHLEFLQFYYTE- 299

Query: 324  RKGLKHASAMKAYCGV 277
              G +  SA+K YCGV
Sbjct: 300  -AGQRAESALKTYCGV 314


>ref|XP_002284974.1| PREDICTED: gibberellin 20 oxidase 1 [Vitis vinifera]
            gi|297743336|emb|CBI36203.3| unnamed protein product
            [Vitis vinifera]
          Length = 311

 Score =  300 bits (769), Expect = 4e-79
 Identities = 152/314 (48%), Positives = 210/314 (66%), Gaps = 2/314 (0%)
 Frame = -3

Query: 1212 MGSISSDKIPAIVFYRKDLRPGTPSWCSVRDEIRQALELYGCFEAAFG--GTQLHPEMLG 1039
            MGS  + ++P + F    L+PGT SW     ++  ALE YGCF A +    ++L      
Sbjct: 1    MGS-EAPRLPVLNFSTGTLKPGTRSWLLACKDVLHALEEYGCFVAVYDKVSSELDNTTFC 59

Query: 1038 ELEKLFGLSSETKNKYTLNDVFEGYNGSYSNMPLLESISFDDVPVIERLQSFTDLMWPEG 859
            +LE+LF L +ETK K T +  + GY G +  +PL ES+  +D   ++ ++SFT++MWP G
Sbjct: 60   QLEELFDLPTETKVKNTSDKPYFGYIGQHPLIPLHESMGIEDATTLKGVESFTNIMWPAG 119

Query: 858  NSNFCDILCSYVRQVSELELMVKRMIFESFGLERDFNATEKSTSYHLRAMRYMAPKTNEP 679
            N +FC+ + SY + VSELE MVK+M+FES+  E+ +++  +ST+Y LR ++Y  P+ NE 
Sbjct: 120  NDHFCETVLSYSKLVSELEQMVKKMVFESYDAEKYYDSHIQSTTYLLRLIKYRGPQKNET 179

Query: 678  NLGIDTHTDASFLTILNQNQVHGLEVQTKKGEWISVKPAPSSYVVMIGDACMAWSNCRLH 499
             +G   HTD SF+T+L+QN+V GLE++TK GEWIS KP+PSSYVVM GDA +AWSN R+H
Sbjct: 180  CIGTSCHTDKSFITVLHQNEVCGLEIRTKDGEWISFKPSPSSYVVMAGDALLAWSNGRIH 239

Query: 498  NPIHRVMMRGDAIRYSIGLLSYAKGITQTPEELVDEEHPLLFKPFNHLGYHQFIVGEDRK 319
            +P HRV+M G+  RYSIGL +Y +GI + PEEL DEEHPL FKPFNH G   F      K
Sbjct: 240  SPEHRVIMNGNKARYSIGLFAYHRGIIEIPEELADEEHPLQFKPFNHYGLLHFYF--TNK 297

Query: 318  GLKHASAMKAYCGV 277
              +  S  KAYCGV
Sbjct: 298  AGQAESTAKAYCGV 311


>emb|CAN80139.1| hypothetical protein VITISV_028513 [Vitis vinifera]
          Length = 311

 Score =  300 bits (769), Expect = 4e-79
 Identities = 152/314 (48%), Positives = 210/314 (66%), Gaps = 2/314 (0%)
 Frame = -3

Query: 1212 MGSISSDKIPAIVFYRKDLRPGTPSWCSVRDEIRQALELYGCFEAAFG--GTQLHPEMLG 1039
            MGS  + ++P + F    L+PGT SW     ++  ALE YGCF A +    ++L      
Sbjct: 1    MGS-EAPRLPVLNFSTGTLKPGTRSWLLACKDVLHALEEYGCFVAVYDKVSSELDNTTFC 59

Query: 1038 ELEKLFGLSSETKNKYTLNDVFEGYNGSYSNMPLLESISFDDVPVIERLQSFTDLMWPEG 859
            +LE+LF L +ETK K T +  + GY G +  +PL ES+  +D   ++ ++SFT++MWP G
Sbjct: 60   QLEELFDLPTETKVKNTSDKPYFGYIGQHPLIPLHESMGIEDATTLKGVESFTNIMWPAG 119

Query: 858  NSNFCDILCSYVRQVSELELMVKRMIFESFGLERDFNATEKSTSYHLRAMRYMAPKTNEP 679
            N +FC+ + SY + VSELE MVK+M+FES+  E+ +++  +ST+Y LR ++Y  P+ NE 
Sbjct: 120  NDHFCETVLSYSKLVSELEQMVKKMVFESYDAEKYYDSHIQSTTYLLRLIKYRGPQKNET 179

Query: 678  NLGIDTHTDASFLTILNQNQVHGLEVQTKKGEWISVKPAPSSYVVMIGDACMAWSNCRLH 499
             +G   HTD SF+T+L+QN+V GLE++TK GEWIS KP+PSSYVVM GDA +AWSN R+H
Sbjct: 180  CIGTSCHTDKSFITVLHQNEVCGLEIRTKDGEWISFKPSPSSYVVMAGDALLAWSNGRIH 239

Query: 498  NPIHRVMMRGDAIRYSIGLLSYAKGITQTPEELVDEEHPLLFKPFNHLGYHQFIVGEDRK 319
            +P HRV+M G+  RYSIGL +Y +GI + PEEL DEEHPL FKPFNH G   F      K
Sbjct: 240  SPEHRVIMNGNKARYSIGLFAYHRGIIEIPEELADEEHPLQFKPFNHYGLLHFYF--TNK 297

Query: 318  GLKHASAMKAYCGV 277
              +  S  KAYCGV
Sbjct: 298  AGQTESTAKAYCGV 311


>ref|XP_002280670.1| PREDICTED: gibberellin 3-beta-dioxygenase 3 [Vitis vinifera]
            gi|297743341|emb|CBI36208.3| unnamed protein product
            [Vitis vinifera]
          Length = 317

 Score =  300 bits (768), Expect = 5e-79
 Identities = 149/314 (47%), Positives = 212/314 (67%), Gaps = 2/314 (0%)
 Frame = -3

Query: 1212 MGSISSDKIPAIVFYRKDLRPGTPSWCSVRDEIRQALELYGCFEAAFGG--TQLHPEMLG 1039
            MGS SS KIP + F +++L PG+ SW +   ++  ALE +GCF A +    ++L  ++  
Sbjct: 1    MGSHSSAKIPVVDFSKENLNPGSSSWSATCKDVLLALEEFGCFIAVYDKVPSELQNKLFS 60

Query: 1038 ELEKLFGLSSETKNKYTLNDVFEGYNGSYSNMPLLESISFDDVPVIERLQSFTDLMWPEG 859
             LE+LF L +ETK +   N  + GY G +S +PL ESI  D+   +E +QSF +LMWP G
Sbjct: 61   ALEELFNLPTETKMQNAHNKPYHGYVGQHSRLPLHESIGIDNATTLEGMQSFANLMWPAG 120

Query: 858  NSNFCDILCSYVRQVSELELMVKRMIFESFGLERDFNATEKSTSYHLRAMRYMAPKTNEP 679
            N +FC+I   + +   EL+ +V +MIFES+G+ + +++  +  SY LR +++ APK  EP
Sbjct: 121  NDHFCEITREFSKIALELDHLVTKMIFESYGVGKYYDSHLEPMSYLLRVLKHKAPKVKEP 180

Query: 678  NLGIDTHTDASFLTILNQNQVHGLEVQTKKGEWISVKPAPSSYVVMIGDACMAWSNCRLH 499
            NLG   HTD SF+T+L QNQV GLEV+TK GEWIS++ +PSS+ V+ GDA +AWSN RLH
Sbjct: 181  NLGFARHTDKSFITVLYQNQVKGLEVETKDGEWISLELSPSSFAVIAGDALVAWSNGRLH 240

Query: 498  NPIHRVMMRGDAIRYSIGLLSYAKGITQTPEELVDEEHPLLFKPFNHLGYHQFIVGEDRK 319
            +P H+VMM G+  RYS+GL  ++ G+ Q PEEL D+EHPL FK FNHLG  +F   E+  
Sbjct: 241  SPYHKVMMSGNEERYSLGLFQFSSGMIQIPEELGDDEHPLQFKSFNHLGLLRFFHTEE-- 298

Query: 318  GLKHASAMKAYCGV 277
            G K  S +K+YCG+
Sbjct: 299  GQKSKSLIKSYCGI 312


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