BLASTX nr result

ID: Coptis25_contig00009117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009117
         (1308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302705.1| predicted protein [Populus trichocarpa] gi|2...   223   1e-55
ref|XP_002529047.1| Protein FRIGIDA, putative [Ricinus communis]...   214   5e-53
ref|XP_002276345.1| PREDICTED: protein FRIGIDA-like [Vitis vinif...   205   2e-50
emb|CBI26735.3| unnamed protein product [Vitis vinifera]              203   9e-50
gb|ABR17868.1| unknown [Picea sitchensis]                             198   2e-48

>ref|XP_002302705.1| predicted protein [Populus trichocarpa] gi|222844431|gb|EEE81978.1|
            predicted protein [Populus trichocarpa]
          Length = 539

 Score =  223 bits (567), Expect = 1e-55
 Identities = 133/335 (39%), Positives = 186/335 (55%), Gaps = 6/335 (1%)
 Frame = -2

Query: 1217 SVQVKESAKKLGIEWKGKVSGGSDSPLEPLAFLQLLASYGLGSEFDSSEVLDLAVSIARR 1038
            S +V E AKKL +EWK KVS   +SPLE L FL LL +Y L  EFD  E++D  V +AR 
Sbjct: 224  SKEVNERAKKLALEWKRKVSLNGESPLEALGFLHLLVAYNLEKEFDVGELVDYFVIVARF 283

Query: 1037 KQAIDLLRALRMPDKIPDFIQKLTSNGKQLEAVKFVYAFELVDKFPPVPLLKDYFKQSKK 858
            +QA+ L RA+ + +K  D IQKL  +GKQ  AVKF++ F LVDKF PVPLLK + K+SK+
Sbjct: 284  RQAVVLCRAVDLGEKTADLIQKLIDSGKQFLAVKFIFEFGLVDKFQPVPLLKAHLKESKR 343

Query: 857  VAQEIRNKGNHSVQSLNEATAKELAAVKAIIKCIEEHNLESQYPRGILDKRVEQLEKQKA 678
            + +++   G +S+   NEA ++E+  +K+ +  I+E+ L S+YPR  L KR+E LEKQKA
Sbjct: 344  LTKKVCQDGKNSINQQNEARSREVKTLKSALVLIDEYKLGSEYPRMDLKKRIEMLEKQKA 403

Query: 677  SKKRPAVGPTPADKKQQQQFGNKRPKPAET------RXXXXXXXXXXXPHLQPMSSFVDR 516
            +       P+   KKQQQ  G+KRP+ + T                   HLQP S     
Sbjct: 404  AAASAVDEPSHQPKKQQQA-GSKRPRTSATAVQNSNNGSNPVIPPFKQSHLQPAS----- 457

Query: 515  FPPYMSSSAQYGLVGTPPTVAPYMNSAVGHYGFAANPVSSYGLATNPVSYGRHLSPSRSH 336
                + ++  YG VG+      Y     G YG A    +  G   NP S       + +H
Sbjct: 458  ---LLLAAGPYGSVGSISPAILYAGPPAGPYGLAR---AGTGFPGNPRS-------ALAH 504

Query: 335  LYSAESHLAAGLYDRSMGYGGHGMPPSHRSSFYPQ 231
             Y  ESH+ +  YDR+  YGG+ +P  +   +YPQ
Sbjct: 505  QYFPESHVPSDHYDRAAAYGGYDLPLKYHPGYYPQ 539


>ref|XP_002529047.1| Protein FRIGIDA, putative [Ricinus communis]
            gi|223531527|gb|EEF33358.1| Protein FRIGIDA, putative
            [Ricinus communis]
          Length = 491

 Score =  214 bits (544), Expect = 5e-53
 Identities = 132/351 (37%), Positives = 192/351 (54%), Gaps = 11/351 (3%)
 Frame = -2

Query: 1250 MSVVKDKGEEFSVQVKESAKKLGIEWKGKVSGGSDSPLEPLAFLQLLASYGLGSEFDS-S 1074
            +S +K K  +FS +VK  AK L  EWK KVS   DSP E L FL L+ ++ L   FD  +
Sbjct: 173  LSEIKPK-PKFSDEVKIKAKNLAFEWKEKVSLNGDSPSEALGFLNLIVAFELKDMFDDVN 231

Query: 1073 EVLDLAVSIARRKQAIDLLRALRMPDKIPDFIQKLTSNGKQLEAVKFVYAFELVDKFPPV 894
            E+L+  V IAR KQA  L R + + DKI D +QKL  +GKQL AVKF++ F L DKF P 
Sbjct: 232  ELLNYFVVIARFKQATVLARDIGLGDKINDLVQKLIDSGKQLLAVKFIFEFGLTDKFQPA 291

Query: 893  PLLKDYFKQSKKVAQEIRNKGNHSVQSLNEATAKELAAVKAIIKCIEEHNLESQYPRGIL 714
            PLL+D+ K+SK+   ++  +  +SV++ NEA ++E+ A+K++++ I+EHNLE  YP   L
Sbjct: 292  PLLRDHLKESKEFTDKVCKEEKNSVKAQNEARSREVNALKSVLRYIDEHNLEFDYPHLDL 351

Query: 713  DKRVEQLEKQKASKKRPAVGP----------TPADKKQQQQFGNKRPKPAETRXXXXXXX 564
            +KR+E LEKQKA +K  A  P              KKQQQ  G ++ K  + +       
Sbjct: 352  EKRIEMLEKQKADRKVAAPSPDNRPRQQPKKQQLSKKQQQHQGKQQAKKQQLK------- 404

Query: 563  XXXXPHLQPMSSFVDRFPPYMSSSAQYGLVGTPPTVAPYMNSAVGHYGFAANPVSSYGLA 384
                 + +P  + +                   P   P   +     G +A P   YGLA
Sbjct: 405  ----GNKRPRMAML-----------------PGPAAVPISIAGPSSAGASAGP---YGLA 440

Query: 383  TNPVSYGRHLSPSRSHLYSAESHLAAGLYDRSMGYGGHGMPPSHRSSFYPQ 231
               + +  + SP R+H YS+ SH+++  YDRS  +GG+G PP +   +YPQ
Sbjct: 441  GAGMCFPGNPSPVRAHPYSSNSHMSSSYYDRSAAFGGYGFPPQYCPGYYPQ 491


>ref|XP_002276345.1| PREDICTED: protein FRIGIDA-like [Vitis vinifera]
          Length = 533

 Score =  205 bits (521), Expect = 2e-50
 Identities = 121/335 (36%), Positives = 185/335 (55%), Gaps = 4/335 (1%)
 Frame = -2

Query: 1223 EFSVQVKESAKKLGIEWKGKVSGGSDSPLEPLAFLQLLASYGLGSEFDSSEVLDLAVSIA 1044
            E    V++ AK L  EWKGKV  G D+ L+P+ FL LLA+YGLGS++DS+E+L+L + + 
Sbjct: 226  EIGEDVRQRAKSLAQEWKGKVKVG-DNTLKPMGFLHLLAAYGLGSDYDSTELLELLIDVV 284

Query: 1043 RRKQAIDLLRALRMPDKIPDFIQKLTSNGKQLEAVKFVYAFELVDKFPPVPLLKDYFKQS 864
            R ++   L R L + DK+PD IQ L  +GK   AVKFV  F+L  KFP + +LKD  + S
Sbjct: 285  RYREVFGLCRGLNLVDKVPDLIQNLIGSGKPNLAVKFVLEFKLTHKFPLIAILKDIVESS 344

Query: 863  KKVAQEIRNKGNHSVQSLNEATAKELAAVKAIIKCIEEHNLESQYPRGILDKRVEQLEKQ 684
            + VA+++R  G HS+QS NEAT+KE++A+K + K I++++L ++YP   L++R+++LE Q
Sbjct: 345  RDVARKVRKDGKHSLQSQNEATSKEISALKLVTKYIKDYDLNNEYPGAPLEERIQKLESQ 404

Query: 683  ----KASKKRPAVGPTPADKKQQQQFGNKRPKPAETRXXXXXXXXXXXPHLQPMSSFVDR 516
                 A+KKRPA+ P P  K+Q++Q   +    A                  P       
Sbjct: 405  MAARTAAKKRPALAPAPRPKQQKKQKSKQAQTTATASPSVPSGAAGTSSTAAPFQQ---- 460

Query: 515  FPPYMSSSAQYGLVGTPPTVAPYMNSAVGHYGFAANPVSSYGLATNPVSYGRHLSPSRSH 336
              P++ +    GLV  P    P+MN + G YGFA  P+   G          +L P   H
Sbjct: 461  --PHLQAP---GLV--PDGPVPFMNPSAGLYGFAGVPMGFPG----------NLGPPMPH 503

Query: 335  LYSAESHLAAGLYDRSMGYGGHGMPPSHRSSFYPQ 231
            L+  E  L          +GG+G+   +  +++ Q
Sbjct: 504  LHPMEPQL-----PMPFAHGGYGLQSLYPPAYFHQ 533


>emb|CBI26735.3| unnamed protein product [Vitis vinifera]
          Length = 403

 Score =  203 bits (516), Expect = 9e-50
 Identities = 121/318 (38%), Positives = 179/318 (56%), Gaps = 8/318 (2%)
 Frame = -2

Query: 1223 EFSVQVKESAKKLGIEWKGKVSGGSDSPLEPLAFLQLLASYGLGSEFDSSEVLDLAVSIA 1044
            E    V++ AK L  EWKGKV  G D+ L+P+ FL LLA+YGLGS++DS+E+L+L + + 
Sbjct: 78   EIGEDVRQRAKSLAQEWKGKVKVG-DNTLKPMGFLHLLAAYGLGSDYDSTELLELLIDVV 136

Query: 1043 RRKQAIDLLRALRMPDKIPDFIQKLTSNGKQLEAVKFVYAFELVDKFPPVPLLKDYFKQS 864
            R ++   L R L + DK+PD IQ L  +GK   AVKFV  F+L  KFP + +LKD  + S
Sbjct: 137  RYREVFGLCRGLNLVDKVPDLIQNLIGSGKPNLAVKFVLEFKLTHKFPLIAILKDIVESS 196

Query: 863  KKVAQEIRNKGNHSVQSLNEATAKELAAVKAIIKCIEEHNLESQYPRGILDKRVEQLEKQ 684
            + VA+++R  G HS+QS+NEAT+KE++A+K + K I++++L ++YP   L++R+++LE Q
Sbjct: 197  RDVARKVRKDGKHSLQSVNEATSKEISALKLVTKYIKDYDLNNEYPGAPLEERIQKLESQ 256

Query: 683  KAS----KKRPAVGPTPADKKQQQQFGNKRPKPAETRXXXXXXXXXXXPHLQPMSSFVDR 516
             A+    KKRPA+ P P  K+Q++Q   +    A                  P       
Sbjct: 257  MAARTAAKKRPALAPAPRPKQQKKQKSKQAQTTATASPSVPSGAAGTSSTAAPFQQ---- 312

Query: 515  FPPYMSSSAQYGLVGTPPTVAPYMNSAVGHYGFAANPVSSYGLATNPVSYGRHLSPSRSH 336
              P++ +    GLV   P   P+MN + G YGFA  P+   G          +L P   H
Sbjct: 313  --PHLQAP---GLVPDGPV--PFMNPSAGLYGFAGVPMGFPG----------NLGPPMPH 355

Query: 335  LYSAESHL----AAGLYD 294
            L+  E  L    A G YD
Sbjct: 356  LHPMEPQLPMPFAHGGYD 373


>gb|ABR17868.1| unknown [Picea sitchensis]
          Length = 601

 Score =  198 bits (504), Expect = 2e-48
 Identities = 130/344 (37%), Positives = 183/344 (53%), Gaps = 19/344 (5%)
 Frame = -2

Query: 1214 VQVKESAKKLGIEWKGKVSGGSD----SPLEPLAFLQLLASYGLGSEFDSSEVLDLAVSI 1047
            + +KE AK +  EWK K++   D    + LE  AFLQLLA++G+ SEFD  ++  L +++
Sbjct: 271  INIKEQAKGIADEWKSKINLEGDVANGNSLEAQAFLQLLATFGIASEFDKDDLCKLVLAV 330

Query: 1046 ARRKQAIDLLRALRMPDKIPDFIQKLTSNGKQLEAVKFVYAFELVDKFPPVPLLKDYFKQ 867
            ARR+Q  +L R+L +  K+PD ++ L ++G+Q+EAV F +AF L +KFPPVPLLK+Y K 
Sbjct: 331  ARRRQTPELCRSLGLESKMPDVVETLVNSGRQIEAVNFAHAFGLTEKFPPVPLLKEYLKD 390

Query: 866  SKKVAQEIRNKGNHSVQSLNEATAKELAAVKAIIKCIEEHNLESQYPRGILDKRVEQLEK 687
            +KK +Q     GN+S  + NEA  KEL+A +A+IKCIEEH LESQ+    L KRV QLEK
Sbjct: 391  AKKASQASLKSGNNSTAAQNEANTKELSAYRAVIKCIEEHKLESQFSPDPLQKRVAQLEK 450

Query: 686  QKASKKRPAVGPTPADKKQQQQFGN----KRPKPAETRXXXXXXXXXXXPHLQPMSSFVD 519
             KA +KR A       K+ +   GN      P  A  R             L   S+  D
Sbjct: 451  AKADRKRSAGAVKSQPKRPRANGGNAGVYMPPLSAAERTPA----------LYASSNAAD 500

Query: 518  RFPPYMSSSAQYGLVGTPPTVAPYMNSAVGHYGFAANPVSSYGLATNPVSYGRHLSPSRS 339
            R         QY   G  P V  Y  +  G   +  +    YG A   V     +S SR 
Sbjct: 501  RSFYRSLDRVQYS--GAAPGVTSY--NLQGQSAYDRSNQGIYGAAYG-VGNRSPVSLSRP 555

Query: 338  HLYSAE----SHLAAGLYDRSMGYGGHGM-------PPSHRSSF 240
            ++Y ++    S L +G Y+ S  Y  H         PP+++SSF
Sbjct: 556  YMYPSDNMGPSLLGSGSYNSSTNYNNHHFGSGLPPPPPAYQSSF 599


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