BLASTX nr result
ID: Coptis25_contig00009116
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00009116
(2018 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002266551.2| PREDICTED: CCA tRNA nucleotidyltransferase, ... 733 0.0
emb|CBI18302.3| unnamed protein product [Vitis vinifera] 730 0.0
ref|XP_002327340.1| predicted protein [Populus trichocarpa] gi|2... 694 0.0
ref|XP_002533879.1| poly(A) polymerase, putative [Ricinus commun... 673 0.0
ref|XP_004140936.1| PREDICTED: CCA tRNA nucleotidyltransferase, ... 664 0.0
>ref|XP_002266551.2| PREDICTED: CCA tRNA nucleotidyltransferase, mitochondrial [Vitis
vinifera]
Length = 564
Score = 733 bits (1892), Expect = 0.0
Identities = 370/556 (66%), Positives = 452/556 (81%), Gaps = 4/556 (0%)
Frame = -3
Query: 1980 LAPFKLPNFHLNSKLGF--YKSYNCRAVQTMSISLTEGQQEVKVKEKIQLNEKEKQIFDR 1807
L PF LP ++ GF +CRA+ + S V+V++ I L KE QIF +
Sbjct: 22 LQPFLLP---CSTAFGFPTLSPLHCRAMASSPPS-------VQVRDSIDLTPKETQIFQK 71
Query: 1806 LLQVVTHFNLQTQLRVAGGWVRDKLLGKECYDIDIALDNMLGKEFCEKVNEFLLHSGEDK 1627
LLQVV HF+L+TQLRVAGGWVRDKLLGKECYDIDIALD+MLG+EFCEK+N++L +GE+K
Sbjct: 72 LLQVVRHFSLRTQLRVAGGWVRDKLLGKECYDIDIALDDMLGREFCEKINDYLSCTGEEK 131
Query: 1626 CGIGVIQCNPDQSKHLETARMRLYDIWIDFVNLRSENYSENSRIPTMTFGTAKDDAYRRD 1447
GIGVIQCNPDQSKHLETARMRL+D WIDFVNLRSE+YSENSRIPTM FGTAK+DAYRRD
Sbjct: 132 QGIGVIQCNPDQSKHLETARMRLFDEWIDFVNLRSEDYSENSRIPTMRFGTAKEDAYRRD 191
Query: 1446 LTINSLFYNINTNAVEDFTERGIKDLKSGKIVTPLPPKETFLDDPLRVLRAIRFGARFGF 1267
LTINSLFYNINT++VEDFT RGI+DLKSGKIVTPLPPK+TFLDDPLRVLRAIRFGARFGF
Sbjct: 192 LTINSLFYNINTSSVEDFTGRGIEDLKSGKIVTPLPPKDTFLDDPLRVLRAIRFGARFGF 251
Query: 1266 VLDKELKEAASSDEVKAAIADKISRERIGHEIDLMISGNEPVKAMAYICELQLFWVVFSL 1087
+LD+ELK AA D+V+AAIADKISRERIGHEIDLMISGNEPVKAM YIC+L LF VVFSL
Sbjct: 252 ILDEELKLAAGCDDVRAAIADKISRERIGHEIDLMISGNEPVKAMTYICDLLLFSVVFSL 311
Query: 1086 PCLPHESGSPNFEDRLCVAYVDAAWSLLQVVGYSTFNDDQRRLYLYGVLFLPLRKSMYSD 907
P + + S DRLC+ Y+DA W+L+Q++G STFND+QRRLYLY LFLP RK++Y
Sbjct: 312 PPIVKPAISEEC-DRLCIGYIDAGWNLIQLIGSSTFNDEQRRLYLYAALFLPFRKTLY-- 368
Query: 906 NKGKKAIKVPVVNHIFRNSLKLKASDAETVINLHVASERFVSLVPFL--TSKVMNVEEDS 733
+G KA K+PVVNHI RNSLKL+ASDA+TV+++H A E+F+SL+PF+ T + E +
Sbjct: 369 -EGGKARKIPVVNHIIRNSLKLRASDADTVVSIHCAVEKFISLIPFIESTESIQISEAEW 427
Query: 732 EIENFNVPDTSKQRIVAGKLLREIKGFWRVSLLISTLIFPSDSSLAEGSSEMCAELDKSS 553
IE ++P TSK RI+ G LLREIKGFWRV+L++STL++P+D + S+ +LDK
Sbjct: 428 GIEILDLPVTSKLRILTGLLLREIKGFWRVALMVSTLLYPNDINHTRDISKNNFQLDKRR 487
Query: 552 QMYRRVENIILELGLDNVWEMKPLVNGKEIMSILQLKTGGPQVKEWQNRLVEWQLAYPSG 373
+++ VEN I+ LGL+ VWE+KPLVNGK+IM++LQLK+GGP V++WQ +L++WQLA+PSG
Sbjct: 488 KVFEMVENAIVGLGLEEVWELKPLVNGKDIMNVLQLKSGGPLVRDWQQKLIQWQLAHPSG 547
Query: 372 TAEECLDWMRQTHSKR 325
TAEECLDWMRQ KR
Sbjct: 548 TAEECLDWMRQKRPKR 563
>emb|CBI18302.3| unnamed protein product [Vitis vinifera]
Length = 519
Score = 730 bits (1884), Expect = 0.0
Identities = 359/515 (69%), Positives = 436/515 (84%), Gaps = 2/515 (0%)
Frame = -3
Query: 1863 VKVKEKIQLNEKEKQIFDRLLQVVTHFNLQTQLRVAGGWVRDKLLGKECYDIDIALDNML 1684
V+V++ I L KE QIF +LLQVV HF+L+TQLRVAGGWVRDKLLGKECYDIDIALD+ML
Sbjct: 8 VQVRDSIDLTPKETQIFQKLLQVVRHFSLRTQLRVAGGWVRDKLLGKECYDIDIALDDML 67
Query: 1683 GKEFCEKVNEFLLHSGEDKCGIGVIQCNPDQSKHLETARMRLYDIWIDFVNLRSENYSEN 1504
G+EFCEK+N++L +GE+K GIGVIQCNPDQSKHLETARMRL+D WIDFVNLRSE+YSEN
Sbjct: 68 GREFCEKINDYLSCTGEEKQGIGVIQCNPDQSKHLETARMRLFDEWIDFVNLRSEDYSEN 127
Query: 1503 SRIPTMTFGTAKDDAYRRDLTINSLFYNINTNAVEDFTERGIKDLKSGKIVTPLPPKETF 1324
SRIPTM FGTAK+DAYRRDLTINSLFYNINT++VEDFT RGI+DLKSGKIVTPLPPK+TF
Sbjct: 128 SRIPTMRFGTAKEDAYRRDLTINSLFYNINTSSVEDFTGRGIEDLKSGKIVTPLPPKDTF 187
Query: 1323 LDDPLRVLRAIRFGARFGFVLDKELKEAASSDEVKAAIADKISRERIGHEIDLMISGNEP 1144
LDDPLRVLRAIRFGARFGF+LD+ELK AA D+V+AAIADKISRERIGHEIDLMISGNEP
Sbjct: 188 LDDPLRVLRAIRFGARFGFILDEELKLAAGCDDVRAAIADKISRERIGHEIDLMISGNEP 247
Query: 1143 VKAMAYICELQLFWVVFSLPCLPHESGSPNFEDRLCVAYVDAAWSLLQVVGYSTFNDDQR 964
VKAM YIC+L LF VVFSLP + + S DRLC+ Y+DA W+L+Q++G STFND+QR
Sbjct: 248 VKAMTYICDLLLFSVVFSLPPIVKPAISEEC-DRLCIGYIDAGWNLIQLIGSSTFNDEQR 306
Query: 963 RLYLYGVLFLPLRKSMYSDNKGKKAIKVPVVNHIFRNSLKLKASDAETVINLHVASERFV 784
RLYLY LFLP RK++Y +G KA K+PVVNHI RNSLKL+ASDA+TV+++H A E+F+
Sbjct: 307 RLYLYAALFLPFRKTLY---EGGKARKIPVVNHIIRNSLKLRASDADTVVSIHCAVEKFI 363
Query: 783 SLVPFL--TSKVMNVEEDSEIENFNVPDTSKQRIVAGKLLREIKGFWRVSLLISTLIFPS 610
SL+PF+ T + E + IE ++P TSK RI+ G LLREIKGFWRV+L++STL++P+
Sbjct: 364 SLIPFIESTESIQISEAEWGIEILDLPVTSKLRILTGLLLREIKGFWRVALMVSTLLYPN 423
Query: 609 DSSLAEGSSEMCAELDKSSQMYRRVENIILELGLDNVWEMKPLVNGKEIMSILQLKTGGP 430
D + S+ +LDK +++ VEN I+ LGL+ VWE+KPLVNGK+IM++LQLK+GGP
Sbjct: 424 DINHTRDISKNNFQLDKRRKVFEMVENAIVGLGLEEVWELKPLVNGKDIMNVLQLKSGGP 483
Query: 429 QVKEWQNRLVEWQLAYPSGTAEECLDWMRQTHSKR 325
V++WQ +L++WQLA+PSGTAEECLDWMRQ KR
Sbjct: 484 LVRDWQQKLIQWQLAHPSGTAEECLDWMRQKRPKR 518
>ref|XP_002327340.1| predicted protein [Populus trichocarpa] gi|222835710|gb|EEE74145.1|
predicted protein [Populus trichocarpa]
Length = 528
Score = 694 bits (1792), Expect = 0.0
Identities = 345/522 (66%), Positives = 422/522 (80%), Gaps = 5/522 (0%)
Frame = -3
Query: 1863 VKVKEKIQLNEKEKQIFDRLLQVVTHFNLQTQLRVAGGWVRDKLLGKECYDIDIALDNML 1684
++VK+KI+LNE EKQIFDRL+ + HFNL T+LRVAGGWVRDKLLGKEC DIDIA+DNML
Sbjct: 14 IEVKDKIELNEVEKQIFDRLVNTLRHFNLNTELRVAGGWVRDKLLGKECCDIDIAIDNML 73
Query: 1683 GKEFCEKVNEFLLHSGEDKCGIGVIQCNPDQSKHLETARMRLYDIWIDFVNLRSENYSEN 1504
G EF +KV E+LL +GE+ G+GVI NPDQSKHLETARMRL D+WIDFVNLRSE+YSEN
Sbjct: 74 GSEFVDKVREYLLSTGEEAHGVGVIPRNPDQSKHLETARMRLLDLWIDFVNLRSEDYSEN 133
Query: 1503 SRIPTMTFGTAKDDAYRRDLTINSLFYNINTNAVEDFTERGIKDLKSGKIVTPLPPKETF 1324
SRIPTMTFGTAK+DAYRRDLTINSLFYNINT++VED T RGI+DLKSGKIVTPLPPK+TF
Sbjct: 134 SRIPTMTFGTAKEDAYRRDLTINSLFYNINTSSVEDLTGRGIEDLKSGKIVTPLPPKDTF 193
Query: 1323 LDDPLRVLRAIRFGARFGFVLDKELKEAASSDEVKAAIADKISRERIGHEIDLMISGNEP 1144
LDDPLRVLRAIRFGARFGFVL++ELKEAA+ D+VK A+ KIS+ERIG EIDLMISGN+P
Sbjct: 194 LDDPLRVLRAIRFGARFGFVLEEELKEAAACDDVKNALKAKISKERIGTEIDLMISGNQP 253
Query: 1143 VKAMAYICELQLFWVVFSLPCLPHESGSPNFEDR---LCVAYVDAAWSLLQVVGYSTFND 973
VKAM YI +L LFWVVF+L H P + LCVAY+DAAW+L+ ++G S+F
Sbjct: 254 VKAMTYIADLTLFWVVFNL----HPKVEPTVSEECQGLCVAYLDAAWNLIHLIGGSSFTG 309
Query: 972 DQRRLYLYGVLFLPLRKSMYSDNKGKKAIKVPVVNHIFRNSLKLKASDAETVINLHVASE 793
+QRRL LY LFLPLR ++Y D KGK KVPVVN+IFR+SLK KASD ETVI +H + E
Sbjct: 310 EQRRLCLYAALFLPLRNTIYKDEKGK---KVPVVNYIFRDSLKQKASDPETVIKIHRSLE 366
Query: 792 RFVSLVPFLTSK--VMNVEEDSEIENFNVPDTSKQRIVAGKLLREIKGFWRVSLLISTLI 619
+F++L+P LTS E D +E F+VP TSK R+ G LLRE+K FWRV LLIST++
Sbjct: 367 KFLTLIPLLTSNDDTQPAEVDMGMELFDVPITSKLRVATGFLLREVKEFWRVGLLISTML 426
Query: 618 FPSDSSLAEGSSEMCAELDKSSQMYRRVENIILELGLDNVWEMKPLVNGKEIMSILQLKT 439
+PSD+ + E ELD+ +++ E+ I+ LGL+ VW++KPLVNGK+IM++LQLK+
Sbjct: 427 YPSDTDSTQDFLEKKFELDRRKDLFKAAEDAIVNLGLERVWDLKPLVNGKDIMTVLQLKS 486
Query: 438 GGPQVKEWQNRLVEWQLAYPSGTAEECLDWMRQTHSKRAKLK 313
GGP VKEWQ +L+ WQ A+P+GT EECLDWM++TH KRAK++
Sbjct: 487 GGPVVKEWQQKLLAWQFAHPAGTVEECLDWMKETHLKRAKME 528
>ref|XP_002533879.1| poly(A) polymerase, putative [Ricinus communis]
gi|223526180|gb|EEF28510.1| poly(A) polymerase, putative
[Ricinus communis]
Length = 577
Score = 673 bits (1737), Expect = 0.0
Identities = 334/540 (61%), Positives = 431/540 (79%), Gaps = 2/540 (0%)
Frame = -3
Query: 1926 KSYNCRAVQTMSISLTEGQQEVKVKEKIQLNEKEKQIFDRLLQVVTHFNLQTQLRVAGGW 1747
+ ++CRA+ T + Q ++VK+KI+L E EK+IFDRLL + HFNLQTQLRVAGGW
Sbjct: 48 RRFSCRAMGTST-----PQAVIQVKDKIELTEIEKKIFDRLLNTLRHFNLQTQLRVAGGW 102
Query: 1746 VRDKLLGKECYDIDIALDNMLGKEFCEKVNEFLLHSGEDKCGIGVIQCNPDQSKHLETAR 1567
VRDKLLGK+CYDIDIA+DNMLG EF +KV E+LL +GE+ G+G+I NPDQSKHLETAR
Sbjct: 103 VRDKLLGKDCYDIDIAIDNMLGSEFVDKVREYLLSTGEEVGGLGIIPRNPDQSKHLETAR 162
Query: 1566 MRLYDIWIDFVNLRSENYSENSRIPTMTFGTAKDDAYRRDLTINSLFYNINTNAVEDFTE 1387
MRL+D+WIDFVNLR E+Y+E+SRIPTM FGTA++DA+RRDLTINSLFYNINT++VED TE
Sbjct: 163 MRLFDLWIDFVNLRCEDYTEDSRIPTMKFGTAEEDAFRRDLTINSLFYNINTSSVEDLTE 222
Query: 1386 RGIKDLKSGKIVTPLPPKETFLDDPLRVLRAIRFGARFGFVLDKELKEAASSDEVKAAIA 1207
RGI+DLK GKIVTPLPPK TFLDDPLRVLRAIRFGARFGF+LD+ELKEAA+ D+VK A+A
Sbjct: 223 RGIEDLKFGKIVTPLPPKATFLDDPLRVLRAIRFGARFGFILDEELKEAAACDDVKNALA 282
Query: 1206 DKISRERIGHEIDLMISGNEPVKAMAYICELQLFWVVFSLPCLPHESGSPNFEDRLCVAY 1027
KIS+ERIG+EIDLM+SGN+PVKAM YI +L LFW++F LP + S +LC+AY
Sbjct: 283 AKISKERIGNEIDLMLSGNQPVKAMTYIGDLTLFWIIFGLPPKVEPAVSEGCH-KLCIAY 341
Query: 1026 VDAAWSLLQVVGYSTFNDDQRRLYLYGVLFLPLRKSMYSDNKGKKAIKVPVVNHIFRNSL 847
+DA W+L+Q + S F D+QRRL LY LFLP R +Y + KGK VPVVN IF++SL
Sbjct: 342 LDATWNLIQSIRSSFFTDEQRRLSLYAALFLPFRNIIYIE-KGK---NVPVVNFIFKDSL 397
Query: 846 KLKASDAETVINLHVASERFVSLVPFLTS--KVMNVEEDSEIENFNVPDTSKQRIVAGKL 673
K KASD+ETV+ +H + E+F++++P LTS E D +E +VP ++K R++ G L
Sbjct: 398 KQKASDSETVMKIHKSLEKFLNIIPLLTSDDDTQPAEVDWALELIDVPFSAKLRVLTGFL 457
Query: 672 LREIKGFWRVSLLISTLIFPSDSSLAEGSSEMCAELDKSSQMYRRVENIILELGLDNVWE 493
LREIK FWRV+LLIST+I+P+D + + ELDK ++++ VE+ I + GL+ +W+
Sbjct: 458 LREIKDFWRVALLISTMIYPADIDSTQSFLDKQFELDKRKELFKTVEDAITKQGLEKIWD 517
Query: 492 MKPLVNGKEIMSILQLKTGGPQVKEWQNRLVEWQLAYPSGTAEECLDWMRQTHSKRAKLK 313
+KPLVNGKEIMS+LQLK+GGP V+EWQ +L+ WQLA+P+GTAEECLDWM++TH KRA+++
Sbjct: 518 VKPLVNGKEIMSVLQLKSGGPLVREWQQKLLAWQLAHPTGTAEECLDWMKETHLKRARIE 577
>ref|XP_004140936.1| PREDICTED: CCA tRNA nucleotidyltransferase, mitochondrial-like
[Cucumis sativus]
Length = 577
Score = 664 bits (1713), Expect = 0.0
Identities = 346/571 (60%), Positives = 431/571 (75%), Gaps = 6/571 (1%)
Frame = -3
Query: 2010 LTYPQRHLTFL---APFKLPNFHLNSKLGFYKSYNCRAVQTMSISLTEGQQEVKVKEKIQ 1840
L++P L F +PFK P S ++M+ +++ + V+VK+ I+
Sbjct: 21 LSFPTSFLKFPPPHSPFKFPTTRFPSP------------KSMTTAISSPKPLVQVKDNIE 68
Query: 1839 LNEKEKQIFDRLLQVVTHFNLQTQLRVAGGWVRDKLLGKECYDIDIALDNMLGKEFCEKV 1660
L E E++IF RLL + HFNLQTQLRVAGGWVRDKLLGK+CYDIDIALDNMLG EF +KV
Sbjct: 69 LTETEEKIFHRLLGTLRHFNLQTQLRVAGGWVRDKLLGKDCYDIDIALDNMLGSEFVDKV 128
Query: 1659 NEFLLHSGEDKCGIGVIQCNPDQSKHLETARMRLYDIWIDFVNLRSENYSENSRIPT-MT 1483
E+LL GE+ G+ VI CNPDQSKHLETARMR++D+WIDFVNLR E YSENSRIPT
Sbjct: 129 REYLLTVGEEAQGVAVIPCNPDQSKHLETARMRIFDMWIDFVNLRCEEYSENSRIPTKQK 188
Query: 1482 FGTAKDDAYRRDLTINSLFYNINTNAVEDFTERGIKDLKSGKIVTPLPPKETFLDDPLRV 1303
FGTA++DAYRRDLTINSLFYNIN + VEDFT+RGI DLK GKIVTPLP K TF+DDPLRV
Sbjct: 189 FGTAEEDAYRRDLTINSLFYNINLSIVEDFTKRGISDLKFGKIVTPLPAKATFMDDPLRV 248
Query: 1302 LRAIRFGARFGFVLDKELKEAASSDEVKAAIADKISRERIGHEIDLMISGNEPVKAMAYI 1123
LRAIRF ARF F LD+ELKEAA+ +EVKAA+A KISRERIG EIDLMI+GN+PVKAM+YI
Sbjct: 249 LRAIRFCARFEFTLDEELKEAAACEEVKAALAAKISRERIGVEIDLMIAGNQPVKAMSYI 308
Query: 1122 CELQLFWVVFSLPCLPHESGSPNFEDRLCVAYVDAAWSLLQVVGYSTFNDDQRRLYLYGV 943
+L LFW VF+LP E +RLCVA +DA W+L+Q + TF+D+Q+RL LY
Sbjct: 309 SDLTLFWTVFTLPS-NIEPEISEVCNRLCVACLDATWNLIQHINCFTFSDEQKRLSLYAS 367
Query: 942 LFLPLRKSMYSDNKGKKAIKVPVVNHIFRNSLKLKASDAETVINLHVASERFVSLVPFLT 763
LFLP RK + D K K K+P+VN+IFR+SLK KASDAETV+N+H A E+F+SL+P L
Sbjct: 368 LFLPFRKFTFKDKKSK---KIPIVNYIFRDSLKRKASDAETVVNVHQALEKFLSLIPLLV 424
Query: 762 SK--VMNVEEDSEIENFNVPDTSKQRIVAGKLLREIKGFWRVSLLISTLIFPSDSSLAEG 589
SK + D +E +VP TS+ R++ G LLREIK FW V+LL++TL++P+D A+
Sbjct: 425 SKEEIQPNGVDWGVECADVPATSRIRVLTGLLLREIKDFWPVALLMATLLYPADVDYAQD 484
Query: 588 SSEMCAELDKSSQMYRRVENIILELGLDNVWEMKPLVNGKEIMSILQLKTGGPQVKEWQN 409
EL+K +++ V N I++LGL+NVWEMKPLVNGKEIM+ILQLK GGP V+EWQ
Sbjct: 485 LLNRHFELEKRKELFDDVYNEIVKLGLENVWEMKPLVNGKEIMNILQLKAGGPLVREWQQ 544
Query: 408 RLVEWQLAYPSGTAEECLDWMRQTHSKRAKL 316
+++ WQLA+PSGT+EECLDW+R+THSKR KL
Sbjct: 545 KILAWQLAHPSGTSEECLDWIRETHSKRVKL 575