BLASTX nr result

ID: Coptis25_contig00009110 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009110
         (1104 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263732.1| PREDICTED: uncharacterized protein LOC100249...   288   2e-75
ref|XP_002263161.1| PREDICTED: uncharacterized protein LOC100244...   285   2e-74
ref|XP_002530555.1| conserved hypothetical protein [Ricinus comm...   283   5e-74
ref|XP_002321933.1| predicted protein [Populus trichocarpa] gi|2...   276   7e-72
ref|XP_003553153.1| PREDICTED: protein NDR1-like [Glycine max]        275   1e-71

>ref|XP_002263732.1| PREDICTED: uncharacterized protein LOC100249528 [Vitis vinifera]
           gi|297737207|emb|CBI26408.3| unnamed protein product
           [Vitis vinifera]
          Length = 249

 Score =  288 bits (736), Expect = 2e-75
 Identities = 145/246 (58%), Positives = 184/246 (74%), Gaps = 3/246 (1%)
 Frame = -1

Query: 921 MADQQKIHPV-DVEAPPTAPLMPNGALKSEKGDPTEQYP--PIRRTIPVIHSRPPRKRGC 751
           MAD QKIHPV D EAPPT PL+P G+ +SEKGDP +  P  P++RTIPVIHS+PP KR C
Sbjct: 1   MADHQKIHPVVDPEAPPTEPLVPRGSFRSEKGDPFQHPPDPPLQRTIPVIHSKPP-KRSC 59

Query: 750 CCRFICWTISLFLVLVILIAATLGILYLVFQPKLPKYSVDRLRISDFRVNPDMSLYSRFT 571
           CC+ +CWTISL ++L++++ A  G+LYLVFQPKLPKYSVD LRI+DF++N DM+LY++F 
Sbjct: 60  CCKCMCWTISLLVLLLVIVGAIAGVLYLVFQPKLPKYSVDSLRITDFQLNYDMTLYAKFD 119

Query: 570 VEITARNPNKKIGIYYESGSDISVYYSNIKLSGGALPKFYQGHQNTTVLDVDLSGQNKNA 391
           ++I A NPNKKIGIYYE G  +SV+Y+N KL  G+LPKFYQGHQNTTVL+V L+GQ +  
Sbjct: 120 MKIKANNPNKKIGIYYEKGGKLSVWYTNTKLCHGSLPKFYQGHQNTTVLNVVLTGQTQYG 179

Query: 390 NGLMAELTQQQQQTGNIPLNLKANVPXXXXXXXXXXXXXXXXVRCNLVVDNLTANNMIRI 211
           + LM  L Q+QQQ   IPL+LK +VP                V C LVVD+L+ANN+I I
Sbjct: 180 STLMTAL-QEQQQKRRIPLDLKVDVPVAIKLGKLKLKKVRFLVECLLVVDSLSANNLISI 238

Query: 210 RTSSCK 193
           R S C+
Sbjct: 239 RASDCR 244


>ref|XP_002263161.1| PREDICTED: uncharacterized protein LOC100244374 [Vitis vinifera]
           gi|296083806|emb|CBI24023.3| unnamed protein product
           [Vitis vinifera]
          Length = 251

 Score =  285 bits (728), Expect = 2e-74
 Identities = 144/247 (58%), Positives = 179/247 (72%), Gaps = 4/247 (1%)
 Frame = -1

Query: 921 MADQQKIHPV-DVEAP--PTAPLMPNGALKSEKGDPTEQYPPIRRTIPVIHSRPPRK-RG 754
           MAD Q+IHP  D EAP  PTAPL+P GA KS++ DPTEQYPP +RTIPV+HS+PP+K R 
Sbjct: 1   MADPQRIHPAQDPEAPHTPTAPLVPRGASKSDRSDPTEQYPPFQRTIPVMHSKPPKKKRS 60

Query: 753 CCCRFICWTISLFLVLVILIAATLGILYLVFQPKLPKYSVDRLRISDFRVNPDMSLYSRF 574
           C C+  CWTISL L+L+++IA  + IL+LVF+PKLPKYS+D LRI+   +  D SL + F
Sbjct: 61  CLCKCFCWTISLLLLLIVIIAIVVAILFLVFKPKLPKYSIDGLRITQLSLGSDDSLSATF 120

Query: 573 TVEITARNPNKKIGIYYESGSDISVYYSNIKLSGGALPKFYQGHQNTTVLDVDLSGQNKN 394
            V ITARNPN KIGIYYE GS I+V+Y+  +L  G+LPKFYQGHQNTTVL V+L+GQ +N
Sbjct: 121 DVNITARNPNTKIGIYYEGGSSITVFYTGTQLCEGSLPKFYQGHQNTTVLTVELTGQTQN 180

Query: 393 ANGLMAELTQQQQQTGNIPLNLKANVPXXXXXXXXXXXXXXXXVRCNLVVDNLTANNMIR 214
           A GL+  L Q+Q++TG+IPL LK   P                  CNLVVDNL ANN I 
Sbjct: 181 ATGLLTTL-QEQRETGSIPLTLKVKQPVRIKLGKLKLMKMKFRATCNLVVDNLDANNTIS 239

Query: 213 IRTSSCK 193
           I++SSCK
Sbjct: 240 IKSSSCK 246


>ref|XP_002530555.1| conserved hypothetical protein [Ricinus communis]
           gi|223529893|gb|EEF31823.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 253

 Score =  283 bits (724), Expect = 5e-74
 Identities = 141/248 (56%), Positives = 178/248 (71%), Gaps = 5/248 (2%)
 Frame = -1

Query: 921 MADQQKIHPV--DVEAP--PTAPLMPNGALKSEKGDPT-EQYPPIRRTIPVIHSRPPRKR 757
           MADQQ+IHPV  DVEAP  PT PLMP  + KS++GDP  +QYPP +RT PV HS+PP+KR
Sbjct: 1   MADQQRIHPVTHDVEAPQTPTVPLMPRNSSKSDQGDPAAQQYPPFQRTFPVKHSKPPKKR 60

Query: 756 GCCCRFICWTISLFLVLVILIAATLGILYLVFQPKLPKYSVDRLRISDFRVNPDMSLYSR 577
            CCC+ +CWT+SL L+L+++I   +GILYLVF+PKLP +S+DRL+I+ F ++ D SL + 
Sbjct: 61  SCCCKCLCWTLSLLLILIVVIGIIIGILYLVFRPKLPDFSIDRLQITQFNLSSDSSLSAA 120

Query: 576 FTVEITARNPNKKIGIYYESGSDISVYYSNIKLSGGALPKFYQGHQNTTVLDVDLSGQNK 397
           F V ITA NPN+KIGIYYE GS I V+YS  KL  G+LPKFYQGH+NTTVL+V L+G  +
Sbjct: 121 FDVTITATNPNEKIGIYYEGGSHIGVWYSGTKLCEGSLPKFYQGHENTTVLNVPLTGHTQ 180

Query: 396 NANGLMAELTQQQQQTGNIPLNLKANVPXXXXXXXXXXXXXXXXVRCNLVVDNLTANNMI 217
           +A GL+  L QQQQ TG IPLNL+   P                V+C L VD+L+ NN I
Sbjct: 181 DAAGLLTSLQQQQQATGIIPLNLRVKQPVRIKLGKLKLFEIKFLVKCKLDVDSLSTNNDI 240

Query: 216 RIRTSSCK 193
            IR SSCK
Sbjct: 241 SIRNSSCK 248


>ref|XP_002321933.1| predicted protein [Populus trichocarpa] gi|222868929|gb|EEF06060.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score =  276 bits (706), Expect = 7e-72
 Identities = 144/266 (54%), Positives = 177/266 (66%), Gaps = 23/266 (8%)
 Frame = -1

Query: 921 MADQQKIHPV------------DVEAP--PTAPLMPNGALKSEKGDPT--------EQYP 808
           MA+ QKIHP+            D EAP  PT PL+P G+ KS+KGD          + YP
Sbjct: 3   MANHQKIHPLNMSSGAHDDQQLDAEAPQAPTVPLVPRGSSKSDKGDAAAHLLPRDNQHYP 62

Query: 807 PIRRTIPVIHSRPPRKRG-CCCRFICWTISLFLVLVILIAATLGILYLVFQPKLPKYSVD 631
           P +RTIPVIH++PP++R  CCCRF+CWT+ L  +L++LI    GILYLVFQPKLPKYS+D
Sbjct: 63  PFQRTIPVIHTKPPKERSSCCCRFLCWTLFLLFLLILLIGVVAGILYLVFQPKLPKYSID 122

Query: 630 RLRISDFRVNPDMSLYSRFTVEITARNPNKKIGIYYESGSDISVYYSNIKLSGGALPKFY 451
           RL+I+ F +  + SL + F V ITARNPNKK+G+YYE GS ISV+Y+   L  G+LP+FY
Sbjct: 123 RLQITQFNLTNNSSLTATFDVTITARNPNKKVGVYYEGGSHISVWYTGTNLCQGSLPRFY 182

Query: 450 QGHQNTTVLDVDLSGQNKNANGLMAELTQQQQQTGNIPLNLKANVPXXXXXXXXXXXXXX 271
           QGH+NTTVL+V LSGQ  +AN L+  L QQQQQTG IPLNL+   P              
Sbjct: 183 QGHRNTTVLNVVLSGQTNDANTLITSLQQQQQQTGIIPLNLRVIQPVRIKFGKLKIMKVK 242

Query: 270 XXVRCNLVVDNLTANNMIRIRTSSCK 193
             VRC L VDNL ANN I IR SSCK
Sbjct: 243 FRVRCRLDVDNLAANNAINIRNSSCK 268


>ref|XP_003553153.1| PREDICTED: protein NDR1-like [Glycine max]
          Length = 244

 Score =  275 bits (703), Expect = 1e-71
 Identities = 143/244 (58%), Positives = 176/244 (72%), Gaps = 2/244 (0%)
 Frame = -1

Query: 918 ADQQKIHPV-DVEAPPTAPLMPNGALKSEKGDPTEQYPPIRRTIPVIHSRPP-RKRGCCC 745
           ADQQ+IHPV DVEAP   PL+P    KS+KG P       +RT PV+HS+PP R+R CCC
Sbjct: 4   ADQQRIHPVHDVEAPHR-PLVPENYAKSDKGIP-------QRTFPVMHSKPPKRRRSCCC 55

Query: 744 RFICWTISLFLVLVILIAATLGILYLVFQPKLPKYSVDRLRISDFRVNPDMSLYSRFTVE 565
           RF+CWT+S+ L+L+I IA T+GILYLVF+PKLPKYSVD+LRIS F V+ + +LY+ F V 
Sbjct: 56  RFMCWTLSILLILIIAIAITIGILYLVFRPKLPKYSVDQLRISQFNVSDNNTLYATFNVA 115

Query: 564 ITARNPNKKIGIYYESGSDISVYYSNIKLSGGALPKFYQGHQNTTVLDVDLSGQNKNANG 385
           ITARNPNKKIGIYYE GS IS +Y + KL  G+LPKFYQGH+NTTVLD+ L+GQ  +A+G
Sbjct: 116 ITARNPNKKIGIYYEGGSHISAWYMDTKLCEGSLPKFYQGHRNTTVLDLPLTGQAPDASG 175

Query: 384 LMAELTQQQQQTGNIPLNLKANVPXXXXXXXXXXXXXXXXVRCNLVVDNLTANNMIRIRT 205
           L+  + +Q QQT N+PLNLK N P                VRC L VDN  A+N IRI +
Sbjct: 176 LVNRIQEQLQQTNNVPLNLKVNQPVRVKFGKLKLFKVKFRVRCRLEVDNFGASNDIRISS 235

Query: 204 SSCK 193
           SSCK
Sbjct: 236 SSCK 239


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