BLASTX nr result

ID: Coptis25_contig00009101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009101
         (2128 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274325.2| PREDICTED: uncharacterized protein LOC100242...   373   e-100
ref|XP_002319380.1| predicted protein [Populus trichocarpa] gi|2...   352   3e-94
emb|CBI28387.3| unnamed protein product [Vitis vinifera]              344   6e-92
ref|XP_002517989.1| conserved hypothetical protein [Ricinus comm...   340   7e-91
ref|NP_567800.1| embryo defective 1923 protein [Arabidopsis thal...   305   4e-80

>ref|XP_002274325.2| PREDICTED: uncharacterized protein LOC100242621 [Vitis vinifera]
          Length = 357

 Score =  373 bits (958), Expect = e-100
 Identities = 195/344 (56%), Positives = 238/344 (69%), Gaps = 8/344 (2%)
 Frame = +1

Query: 73   KLLVTFPPLHSLSQKPIYSLRRLPSYPTITTQSSKP-----NTFLGLSLKTHGFLLNKKM 237
            +L + FPP   L  +   +     S PT   Q SKP     +   G + K  G L  +K+
Sbjct: 15   RLHLKFPPNALLFLRNPSNTLAFCSSPT-RIQLSKPQIQYTHNLFGFAEKNLGVLRRRKL 73

Query: 238  GFVCKSENGE---GGERKKEVDESRGESTMPERFRYLTKEAPDRPVRWPWLVALAFGIYA 408
            GF   +ENGE    G   + ++E+R +STMPERFR+LTKEAPD P+RWPW +AL F +YA
Sbjct: 74   GFCANAENGEEKSNGSGFEGIEEARRQSTMPERFRHLTKEAPDPPLRWPWYIALVFLVYA 133

Query: 409  WRTVLWELSNWKKAALAIAGFMGYLSKFVLAFVFYFIGTPVTSLIRFVETVFYSIRGIYS 588
            WRTVLWELSNW+KAALA+  F GYL K  LA +F+FIG PVTSLIR VET  Y+IR  YS
Sbjct: 134  WRTVLWELSNWRKAALAVVYFAGYLLKLALALIFHFIGNPVTSLIRCVETALYTIRAFYS 193

Query: 589  DIVAAAPVQELTVIIVFVSILIAIAEAAVPDSANSQPYMLTLAGIIGFAAVMDYIPELVF 768
             IV  APV ELT II+  S ++AIAEA VPDS NSQPY+LT++G+IGFAAV D+I E  F
Sbjct: 194  SIVTYAPVPELTTIIILASAVLAIAEATVPDSVNSQPYLLTVSGLIGFAAVKDFISEPFF 253

Query: 769  WLLLMGLFSFSWFFKKKDVVTSTLPVAAALSAVGQPWLRVVVMTSYVALAISYHSKKLSE 948
            W LL+GLF+F+   KK+D V+S LPVAA L+AVGQPWLRVVV+ SY ALAIS+HSKK+S+
Sbjct: 254  WTLLVGLFAFAQLVKKRDYVSSALPVAAVLAAVGQPWLRVVVIASYTALAISHHSKKISD 313

Query: 949  GKSEVEATVTVRKXXXXXXXXXXXIGIHVAAKWIRYRHLTWMIV 1080
            GK E E   T R+           IGIH+AAKW  YRHLTWMIV
Sbjct: 314  GKEEGEVAATSRRLPVPLLCVSLAIGIHLAAKWAGYRHLTWMIV 357


>ref|XP_002319380.1| predicted protein [Populus trichocarpa] gi|222857756|gb|EEE95303.1|
            predicted protein [Populus trichocarpa]
          Length = 349

 Score =  352 bits (902), Expect = 3e-94
 Identities = 185/350 (52%), Positives = 238/350 (68%), Gaps = 21/350 (6%)
 Frame = +1

Query: 94   PLHSLSQKPIYSLRRLPSYPTITTQSSKPNTFLGLSL--------------KTHGFLLN- 228
            P+ +LS   +    ++PS+  ++ Q+ K  T    SL              K  G  L+ 
Sbjct: 4    PITTLSSPTL----KIPSFSRLSLQTHKSQTISCHSLAIKARPLCSHNQPLKRFGLFLDS 59

Query: 229  --KKMGFVCKSENGEGGERKKEV--DESRGESTMPERFRYLTKEAPDRPVRWPWLVALAF 396
              +K+GF   +ENGEG   +  V  D  RGESTMPERFRYLTKEAPD PVRWPW VAL F
Sbjct: 60   RDRKLGFRVNAENGEGESERDGVFDDGERGESTMPERFRYLTKEAPDPPVRWPWFVALGF 119

Query: 397  GIYAWRTVLWELSNWKKAALAIAGFMGYLSKFVLAFVFYFIGTPVTSLIRFVETVFYSIR 576
             IYAWR VL+EL NWK+  +AI GF+GYL K +LA VF+FIG P+TSLIR +ET  Y+ +
Sbjct: 120  LIYAWRAVLFELGNWKRGVIAIIGFVGYLLKLLLAVVFHFIGDPITSLIRCIETAIYTFQ 179

Query: 577  GIYSDIVAAAPVQELTVIIVFVSILIAIAEAAVPDSANSQPYMLTLAGIIGFAAVMDYIP 756
              YS IV +APV ELT+II+  S ++AI EAA P+S + QPY+LT++G+IG+AAV +YI 
Sbjct: 180  AFYSGIVRSAPVPELTLIIMLASAVLAIGEAAAPNSVSRQPYLLTVSGLIGYAAVRNYIS 239

Query: 757  ELVFWLLLMGLFSFSWFFKKKDVVTSTLPVAAALSAVGQPWLRVVVMTSYVALAISYHSK 936
            E +FW LL+GL++FS F KK+D VTS LP AA L+A+G+PW+RV+VM SY+ALAISYHSK
Sbjct: 240  EPLFWTLLLGLYAFSRFIKKRDDVTSALPAAAVLAAIGEPWVRVLVMVSYLALAISYHSK 299

Query: 937  KLSEGKSEVEATV--TVRKXXXXXXXXXXXIGIHVAAKWIRYRHLTWMIV 1080
            +L++GK EVE     T  +           IGIHVAAKW  YRHLTWM+V
Sbjct: 300  QLAKGKEEVEVVTADTGSRVPVPLLCAALAIGIHVAAKWAGYRHLTWMLV 349


>emb|CBI28387.3| unnamed protein product [Vitis vinifera]
          Length = 255

 Score =  344 bits (882), Expect = 6e-92
 Identities = 167/255 (65%), Positives = 196/255 (76%)
 Frame = +1

Query: 316  MPERFRYLTKEAPDRPVRWPWLVALAFGIYAWRTVLWELSNWKKAALAIAGFMGYLSKFV 495
            MPERFR+LTKEAPD P+RWPW +AL F +YAWRTVLWELSNW+KAALA+  F GYL K  
Sbjct: 1    MPERFRHLTKEAPDPPLRWPWYIALVFLVYAWRTVLWELSNWRKAALAVVYFAGYLLKLA 60

Query: 496  LAFVFYFIGTPVTSLIRFVETVFYSIRGIYSDIVAAAPVQELTVIIVFVSILIAIAEAAV 675
            LA +F+FIG PVTSLIR VET  Y+IR  YS IV  APV ELT II+  S ++AIAEA V
Sbjct: 61   LALIFHFIGNPVTSLIRCVETALYTIRAFYSSIVTYAPVPELTTIIILASAVLAIAEATV 120

Query: 676  PDSANSQPYMLTLAGIIGFAAVMDYIPELVFWLLLMGLFSFSWFFKKKDVVTSTLPVAAA 855
            PDS NSQPY+LT++G+IGFAAV D+I E  FW LL+GLF+F+   KK+D V+S LPVAA 
Sbjct: 121  PDSVNSQPYLLTVSGLIGFAAVKDFISEPFFWTLLVGLFAFAQLVKKRDYVSSALPVAAV 180

Query: 856  LSAVGQPWLRVVVMTSYVALAISYHSKKLSEGKSEVEATVTVRKXXXXXXXXXXXIGIHV 1035
            L+AVGQPWLRVVV+ SY ALAIS+HSKK+S+GK E E   T R+           IGIH+
Sbjct: 181  LAAVGQPWLRVVVIASYTALAISHHSKKISDGKEEGEVAATSRRLPVPLLCVSLAIGIHL 240

Query: 1036 AAKWIRYRHLTWMIV 1080
            AAKW  YRHLTWMIV
Sbjct: 241  AAKWAGYRHLTWMIV 255


>ref|XP_002517989.1| conserved hypothetical protein [Ricinus communis]
            gi|223542971|gb|EEF44507.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 350

 Score =  340 bits (873), Expect = 7e-91
 Identities = 179/349 (51%), Positives = 236/349 (67%), Gaps = 20/349 (5%)
 Frame = +1

Query: 94   PLHSLSQKPIYSLRRLPSYPTITTQSSK-PNTFLGLSLKT---HGFLLNKKMGFVCKSEN 261
            P+ +LS     S  ++PS+ ++T ++ K P +   L ++T   +    +++ G    S N
Sbjct: 4    PIATLSSSS--STFKIPSFSSLTLRNHKQPISPFSLPIQTQLSNSKFTHERFGLFVYSNN 61

Query: 262  ---------GEGGERKKEVDES-------RGESTMPERFRYLTKEAPDRPVRWPWLVALA 393
                     G+G      VD++       RGESTMPERFRYLTKEAPD PVRWPW +AL 
Sbjct: 62   KNLGLCLNAGKGERSNSVVDDNDDAEILARGESTMPERFRYLTKEAPDPPVRWPWFIALG 121

Query: 394  FGIYAWRTVLWELSNWKKAALAIAGFMGYLSKFVLAFVFYFIGTPVTSLIRFVETVFYSI 573
            F +YAWR VL+EL+NWK  ALA+  F+ YL K +LA +F+FIG PVTSLIRF+ET+ Y +
Sbjct: 122  FLVYAWRAVLFELANWKNGALAVVSFVSYLLKLLLAVIFHFIGDPVTSLIRFLETLIYMV 181

Query: 574  RGIYSDIVAAAPVQELTVIIVFVSILIAIAEAAVPDSANSQPYMLTLAGIIGFAAVMDYI 753
            R  YS IV+ APV ELT IIV  S ++AIAEAA P+S  SQPY+LT++G+IG+AAV +YI
Sbjct: 182  RAYYSGIVSYAPVPELTTIIVLSSAVLAIAEAAAPNSITSQPYLLTISGLIGYAAVRNYI 241

Query: 754  PELVFWLLLMGLFSFSWFFKKKDVVTSTLPVAAALSAVGQPWLRVVVMTSYVALAISYHS 933
             E +FW LL+GL+ FS  FK++D VTS LP AA L+A+G+PW+RV+VM +Y+ALAIS+HS
Sbjct: 242  SEPLFWTLLLGLYGFSLLFKRRDHVTSALPSAAVLAAIGEPWVRVLVMFAYLALAISHHS 301

Query: 934  KKLSEGKSEVEATVTVRKXXXXXXXXXXXIGIHVAAKWIRYRHLTWMIV 1080
            +KL EGK EV    T RK           IGI +AAKW  YRHLTWM+V
Sbjct: 302  RKLIEGKEEVNVVATGRKVPVPLFCAALAIGIRLAAKWAGYRHLTWMVV 350


>ref|NP_567800.1| embryo defective 1923 protein [Arabidopsis thaliana]
            gi|7269675|emb|CAB79623.1| hypothetical protein
            [Arabidopsis thaliana] gi|94442403|gb|ABF18989.1|
            At4g28210 [Arabidopsis thaliana]
            gi|110741712|dbj|BAE98802.1| hypothetical protein
            [Arabidopsis thaliana] gi|332660054|gb|AEE85454.1| embryo
            defective 1923 protein [Arabidopsis thaliana]
          Length = 348

 Score =  305 bits (780), Expect = 4e-80
 Identities = 151/279 (54%), Positives = 195/279 (69%), Gaps = 1/279 (0%)
 Frame = +1

Query: 247  CKSENGEGGERKKEVDE-SRGESTMPERFRYLTKEAPDRPVRWPWLVALAFGIYAWRTVL 423
            C+ EN   G  + + +  +R ESTMP+RFRYLTKEAPD P+ WPW VAL F +YAWR VL
Sbjct: 73   CEKENAPKGGIEDDAERFARRESTMPDRFRYLTKEAPDSPIIWPWFVALGFLVYAWRAVL 132

Query: 424  WELSNWKKAALAIAGFMGYLSKFVLAFVFYFIGTPVTSLIRFVETVFYSIRGIYSDIVAA 603
            +ELSNW+KAA AI  F+G LSKF LA VF+FIG P+TSLI  VET  YS+R  YS IVA 
Sbjct: 133  FELSNWRKAAFAILAFVGDLSKFALALVFHFIGDPITSLISLVETAMYSVRAFYSGIVAY 192

Query: 604  APVQELTVIIVFVSILIAIAEAAVPDSANSQPYMLTLAGIIGFAAVMDYIPELVFWLLLM 783
             PV+ELT +I+  S ++AI EA  P+S + QPY++T+AG++G+AAV  YI E  FW +L+
Sbjct: 193  TPVRELTTVILLASSVLAIGEAVAPESISKQPYVVTIAGLVGYAAVQSYISEPFFWTVLL 252

Query: 784  GLFSFSWFFKKKDVVTSTLPVAAALSAVGQPWLRVVVMTSYVALAISYHSKKLSEGKSEV 963
            GL+ +S   KK+D VTS LP AA L+ VG+PW+RVV +T Y+ALA+ ++S K S   SE 
Sbjct: 253  GLYGYSRLIKKRDDVTSALPSAAVLAGVGEPWVRVVAITGYLALAMYHNSTKTS---SEE 309

Query: 964  EATVTVRKXXXXXXXXXXXIGIHVAAKWIRYRHLTWMIV 1080
            E+ +  R            IG+ +AAKW  YRHLTWMIV
Sbjct: 310  ESQILRRAPPMPLLAAALAIGVRLAAKWAGYRHLTWMIV 348


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