BLASTX nr result

ID: Coptis25_contig00009089 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009089
         (1213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68638.1| hypothetical protein VITISV_030805 [Vitis vinifera]   105   2e-20
ref|XP_002264543.1| PREDICTED: uncharacterized protein LOC100258...   103   7e-20
ref|XP_002278776.1| PREDICTED: uncharacterized protein LOC100243...   100   1e-18
ref|XP_002305590.1| predicted protein [Populus trichocarpa] gi|1...   100   1e-18
ref|XP_002522995.1| hypothetical protein RCOM_0586940 [Ricinus c...    97   1e-17

>emb|CAN68638.1| hypothetical protein VITISV_030805 [Vitis vinifera]
          Length = 194

 Score =  105 bits (263), Expect = 2e-20
 Identities = 65/132 (49%), Positives = 87/132 (65%), Gaps = 4/132 (3%)
 Frame = -1

Query: 1138 MMYK-TCTKQLTNLHEKMVTTSTPVEIGTRGTVGSLVLREIEHFSNLALDR--NETSQVS 968
            M YK +CT   T   E+M   + PVE+GTRGTVGSLV++EIE+FS L LDR  + +SQ S
Sbjct: 1    MEYKASCTA--TKCPERMAAKA-PVEVGTRGTVGSLVMKEIEYFSRLELDRHGSGSSQRS 57

Query: 967  RAQIADIASTSRG-SRQKFRFVVMLPKTKKNNGGSKFLPRMCSMVDVAETTRPIGTPRFS 791
            +A + D+AS S G SR +F F++M  + KK      FLP +CS+V+VA++ R  G P F+
Sbjct: 58   QAHVVDVASGSTGRSRHRFWFLIMTWRRKKRRSSRTFLPSICSVVEVADSHRLNGIPGFN 117

Query: 790  YRNLKADTKKLL 755
            YR LK D   LL
Sbjct: 118  YRILKDDVPSLL 129


>ref|XP_002264543.1| PREDICTED: uncharacterized protein LOC100258941 [Vitis vinifera]
            gi|302144086|emb|CBI23191.3| unnamed protein product
            [Vitis vinifera]
          Length = 115

 Score =  103 bits (258), Expect = 7e-20
 Identities = 56/113 (49%), Positives = 77/113 (68%), Gaps = 3/113 (2%)
 Frame = -1

Query: 1087 VTTSTPVEIGTRGTVGSLVLREIEHFSNLALDR--NETSQVSRAQIADIASTSRG-SRQK 917
            +    PVE+GTRGTVGSLV++EIE+FS L LDR  + +SQ S+A + D+AS S G SR +
Sbjct: 1    MAAKAPVEVGTRGTVGSLVMKEIEYFSRLELDRHGSGSSQRSQAHVVDVASGSTGRSRHR 60

Query: 916  FRFVVMLPKTKKNNGGSKFLPRMCSMVDVAETTRPIGTPRFSYRNLKADTKKL 758
            F F++M  + KK      FLP +CS+V+VA++ R  G P F+YR LK D K +
Sbjct: 61   FWFLIMTWRRKKRRSSRTFLPSICSVVEVADSHRLNGIPGFNYRILKDDVKNM 113


>ref|XP_002278776.1| PREDICTED: uncharacterized protein LOC100243568 [Vitis vinifera]
          Length = 161

 Score =  100 bits (248), Expect = 1e-18
 Identities = 62/143 (43%), Positives = 90/143 (62%), Gaps = 3/143 (2%)
 Frame = +3

Query: 327 LMTRELDA-KCTLQTPVTPRRIPPSVSVSVPCGANGPKNLQPKKLNEAXXXXXXXNNRHV 503
           LMTREL++ K   Q P    R    V+VSVPC  + PK LQP+  ++        +++ V
Sbjct: 26  LMTRELESVKSVSQVPTISPRNKAPVAVSVPCSTSAPKKLQPRTSSDEAS-----SSKSV 80

Query: 504 NYEQPGSVQKTRRNTRKSTRHMPILTSDAAAVE-TPNRERANKKVLNFVEIVDIKCGNPN 680
           N+  P + +KT+  TRKS + +P+L +D  A++ TP R++A KK    VEIVDIKCGN +
Sbjct: 81  NHRSPETARKTKNYTRKSHK-IPMLGADNIALDRTPCRQKAEKK--GSVEIVDIKCGNTD 137

Query: 681 K-WSSPMPNRFKKLSSAKFSETI 746
           + WSSP+ NR KKL  +K SE++
Sbjct: 138 RAWSSPITNRLKKLGFSKLSESM 160


>ref|XP_002305590.1| predicted protein [Populus trichocarpa] gi|118482524|gb|ABK93184.1|
            unknown [Populus trichocarpa] gi|222848554|gb|EEE86101.1|
            predicted protein [Populus trichocarpa]
          Length = 112

 Score =  100 bits (248), Expect = 1e-18
 Identities = 54/110 (49%), Positives = 72/110 (65%)
 Frame = -1

Query: 1087 VTTSTPVEIGTRGTVGSLVLREIEHFSNLALDRNETSQVSRAQIADIASTSRGSRQKFRF 908
            +  + PV IGTRGTVGSLV +EIE+FS   +DR  +S+  + Q+ADIAS++  SR  F  
Sbjct: 1    MAATAPVAIGTRGTVGSLVRKEIEYFSKFEIDRCASSRKPQEQVADIASSNGQSRPSFWS 60

Query: 907  VVMLPKTKKNNGGSKFLPRMCSMVDVAETTRPIGTPRFSYRNLKADTKKL 758
            + M  K KK  G S FLP +CS V+VA++ R    P FSYR LK D+K +
Sbjct: 61   LTMSWKRKKRRGSSGFLPSICSAVEVADSNRLSRIPGFSYRILKDDSKDM 110


>ref|XP_002522995.1| hypothetical protein RCOM_0586940 [Ricinus communis]
           gi|223537807|gb|EEF39425.1| hypothetical protein
           RCOM_0586940 [Ricinus communis]
          Length = 165

 Score = 96.7 bits (239), Expect = 1e-17
 Identities = 60/143 (41%), Positives = 87/143 (60%), Gaps = 3/143 (2%)
 Frame = +3

Query: 327 LMTRELDA-KCTLQTPVTPRRIPPSVSVSVPCGANGPKNLQPKKLNEAXXXXXXXNNRHV 503
           LMTREL++ K   Q  V  +  P +V VSVPC A+ PK    K  +EA        +  +
Sbjct: 26  LMTRELESIKSAPQVSVFHQDKPKTVPVSVPCSADSPKRQARKSSDEASSSGC---SNTI 82

Query: 504 NYEQPGSVQKTRRNTRKSTRHMPILTSDAAAVE-TPNRERANKKVLNFVEIVDIKCGNPN 680
           N   P + +K + +  KST  MP+L S+   ++ TP+RE+ NKK  N VE+VDIKCG+P+
Sbjct: 83  NRRSPETPRKMK-SFSKSTHRMPMLRSENVTLDRTPSREKTNKKGPNIVEVVDIKCGHPD 141

Query: 681 K-WSSPMPNRFKKLSSAKFSETI 746
           K W+SP+ ++ KKL  +K SE+I
Sbjct: 142 KAWASPITSKLKKLGFSKLSESI 164


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