BLASTX nr result
ID: Coptis25_contig00009078
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00009078
(1893 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277376.1| PREDICTED: uncharacterized protein LOC100262... 707 0.0
emb|CBI33855.3| unnamed protein product [Vitis vinifera] 707 0.0
ref|XP_004136196.1| PREDICTED: E3 ubiquitin-protein ligase RNF14... 701 0.0
ref|XP_002326535.1| predicted protein [Populus trichocarpa] gi|2... 694 0.0
ref|XP_002527660.1| ring finger protein, putative [Ricinus commu... 664 0.0
>ref|XP_002277376.1| PREDICTED: uncharacterized protein LOC100262589 [Vitis vinifera]
Length = 868
Score = 707 bits (1824), Expect = 0.0
Identities = 329/493 (66%), Positives = 402/493 (81%), Gaps = 4/493 (0%)
Frame = -1
Query: 1467 EQLRVSEQEPDLSEEQLRINDQLQEDELLAMEAIYGENLSILREEGGLRVFEIYIHIETP 1288
E+L V +EP+LSE++LRIN QLQEDELLAM++IYG+N+ IL + GL+ F+I++HIE
Sbjct: 345 EKLVVGVEEPELSEDRLRINAQLQEDELLAMQSIYGDNVFILDRQQGLQSFQIHVHIEAL 404
Query: 1287 DELTISAKLLSSNGNAKLGMKSSSSLVTAECSNEFVYHFKVEHLPPIILRCLLPKSYPSH 1108
ELT++AKL SS+G ++ S++F Y F V++LPPI+L CLLPK+YPSH
Sbjct: 405 GELTVTAKLNSSSGRT----------TESDGSDDFSYSFNVQYLPPIVLTCLLPKAYPSH 454
Query: 1107 QPPYFTIAIQWLDSQRISNLCIMLDSLWTDQPGQEVIYQWVEWLQSSSLSYLGINKELVL 928
PPYFTI++QWLDS IS LC MLDSLW +QPGQEV+YQWVEWL SS LSYLG +KE+VL
Sbjct: 455 LPPYFTISVQWLDSISISKLCSMLDSLWKEQPGQEVLYQWVEWLHSSCLSYLGFDKEIVL 514
Query: 927 GPLYMPHSGDRRAVSRSVSPEVDIPSMMNYNDDKCHEVFWQNMHECCICFGEHAGTEFIR 748
GP M +S DRRA+S SVS +VDIPSM +YND+K HE F +N HECCICF E+AGTEFI+
Sbjct: 515 GPYNMGNSEDRRAISGSVSLDVDIPSMKSYNDEKRHENFSKNFHECCICFTEYAGTEFIK 574
Query: 747 LPCKHFYCWKCMEAYSSIHVKEGTINKLLCPDAKCGGMVPPGLLKHLLGDENYERWESLL 568
LPC+HF+CWKCM+ YS +HVKEGT ++LLCP+ KC MVPP LLK LLGDE +E WESL+
Sbjct: 575 LPCQHFFCWKCMKTYSEMHVKEGTGSQLLCPETKCRAMVPPVLLKRLLGDEEFEHWESLM 634
Query: 567 LQKTLASMSDVIYCPRCETACLEDEDHNGQCSKCLYSFCSLCGDRRHVGSTCMSPELKLL 388
LQKTL SMSD+ YCPRCET C+EDED + QCSKC +SFC+LC DRRHVG CM+PE+KL
Sbjct: 635 LQKTLESMSDMTYCPRCETICIEDEDQHAQCSKCFFSFCTLCRDRRHVGLECMTPEVKLH 694
Query: 387 LLQARQGSSQLKEDQRRKEREMINDILSIREILRDAKQCPSCKMAISRTEGCNKIVCENC 208
+LQ RQ SSQLK++QR+KEREMIN++LS++EILRDAKQCPSCKMAISRTEGCNK+VC NC
Sbjct: 695 ILQGRQHSSQLKDEQRKKEREMINELLSVKEILRDAKQCPSCKMAISRTEGCNKMVCNNC 754
Query: 207 GKFFCYRCNKAIDGYEHFRQDGCELFPREEIQ----QWEERMNGRQLVGQIQAELYAAHG 40
G++FCYRCN+AIDGYEHFR CELFP+E IQ WE R+N RQ+VGQIQAEL+A G
Sbjct: 755 GQYFCYRCNQAIDGYEHFRDSACELFPQEMIQNWEWDWEARLNQRQVVGQIQAELFADRG 814
Query: 39 HSCPLCGQMNAKV 1
HSCP+C Q+N KV
Sbjct: 815 HSCPICRQINVKV 827
>emb|CBI33855.3| unnamed protein product [Vitis vinifera]
Length = 662
Score = 707 bits (1824), Expect = 0.0
Identities = 329/493 (66%), Positives = 402/493 (81%), Gaps = 4/493 (0%)
Frame = -1
Query: 1467 EQLRVSEQEPDLSEEQLRINDQLQEDELLAMEAIYGENLSILREEGGLRVFEIYIHIETP 1288
E+L V +EP+LSE++LRIN QLQEDELLAM++IYG+N+ IL + GL+ F+I++HIE
Sbjct: 139 EKLVVGVEEPELSEDRLRINAQLQEDELLAMQSIYGDNVFILDRQQGLQSFQIHVHIEAL 198
Query: 1287 DELTISAKLLSSNGNAKLGMKSSSSLVTAECSNEFVYHFKVEHLPPIILRCLLPKSYPSH 1108
ELT++AKL SS+G ++ S++F Y F V++LPPI+L CLLPK+YPSH
Sbjct: 199 GELTVTAKLNSSSGRT----------TESDGSDDFSYSFNVQYLPPIVLTCLLPKAYPSH 248
Query: 1107 QPPYFTIAIQWLDSQRISNLCIMLDSLWTDQPGQEVIYQWVEWLQSSSLSYLGINKELVL 928
PPYFTI++QWLDS IS LC MLDSLW +QPGQEV+YQWVEWL SS LSYLG +KE+VL
Sbjct: 249 LPPYFTISVQWLDSISISKLCSMLDSLWKEQPGQEVLYQWVEWLHSSCLSYLGFDKEIVL 308
Query: 927 GPLYMPHSGDRRAVSRSVSPEVDIPSMMNYNDDKCHEVFWQNMHECCICFGEHAGTEFIR 748
GP M +S DRRA+S SVS +VDIPSM +YND+K HE F +N HECCICF E+AGTEFI+
Sbjct: 309 GPYNMGNSEDRRAISGSVSLDVDIPSMKSYNDEKRHENFSKNFHECCICFTEYAGTEFIK 368
Query: 747 LPCKHFYCWKCMEAYSSIHVKEGTINKLLCPDAKCGGMVPPGLLKHLLGDENYERWESLL 568
LPC+HF+CWKCM+ YS +HVKEGT ++LLCP+ KC MVPP LLK LLGDE +E WESL+
Sbjct: 369 LPCQHFFCWKCMKTYSEMHVKEGTGSQLLCPETKCRAMVPPVLLKRLLGDEEFEHWESLM 428
Query: 567 LQKTLASMSDVIYCPRCETACLEDEDHNGQCSKCLYSFCSLCGDRRHVGSTCMSPELKLL 388
LQKTL SMSD+ YCPRCET C+EDED + QCSKC +SFC+LC DRRHVG CM+PE+KL
Sbjct: 429 LQKTLESMSDMTYCPRCETICIEDEDQHAQCSKCFFSFCTLCRDRRHVGLECMTPEVKLH 488
Query: 387 LLQARQGSSQLKEDQRRKEREMINDILSIREILRDAKQCPSCKMAISRTEGCNKIVCENC 208
+LQ RQ SSQLK++QR+KEREMIN++LS++EILRDAKQCPSCKMAISRTEGCNK+VC NC
Sbjct: 489 ILQGRQHSSQLKDEQRKKEREMINELLSVKEILRDAKQCPSCKMAISRTEGCNKMVCNNC 548
Query: 207 GKFFCYRCNKAIDGYEHFRQDGCELFPREEIQ----QWEERMNGRQLVGQIQAELYAAHG 40
G++FCYRCN+AIDGYEHFR CELFP+E IQ WE R+N RQ+VGQIQAEL+A G
Sbjct: 549 GQYFCYRCNQAIDGYEHFRDSACELFPQEMIQNWEWDWEARLNQRQVVGQIQAELFADRG 608
Query: 39 HSCPLCGQMNAKV 1
HSCP+C Q+N KV
Sbjct: 609 HSCPICRQINVKV 621
>ref|XP_004136196.1| PREDICTED: E3 ubiquitin-protein ligase RNF14-like [Cucumis sativus]
gi|449525814|ref|XP_004169911.1| PREDICTED: E3
ubiquitin-protein ligase RNF14-like [Cucumis sativus]
Length = 638
Score = 701 bits (1809), Expect = 0.0
Identities = 323/489 (66%), Positives = 401/489 (82%)
Frame = -1
Query: 1467 EQLRVSEQEPDLSEEQLRINDQLQEDELLAMEAIYGENLSILREEGGLRVFEIYIHIETP 1288
E L+ S +EP+LSEEQL IN+QLQEDELLA+E+IYGEN+ IL E G R F+I+IHIE P
Sbjct: 119 EMLQRSSEEPELSEEQLSINNQLQEDELLALESIYGENVYILDEYKGQRRFQIFIHIENP 178
Query: 1287 DELTISAKLLSSNGNAKLGMKSSSSLVTAECSNEFVYHFKVEHLPPIILRCLLPKSYPSH 1108
++TI+AKL N ++ L +KS +S +EF F V++L PI+L CLLPK YPSH
Sbjct: 179 GDITITAKL---NSSSSLEIKSPNS-------DEFSCSFDVKYLNPIVLTCLLPKVYPSH 228
Query: 1107 QPPYFTIAIQWLDSQRISNLCIMLDSLWTDQPGQEVIYQWVEWLQSSSLSYLGINKELVL 928
PPY+TI+I+WLDS RIS LC +LD +W++Q GQEV+YQWVEWLQ SSL+YL +KE++L
Sbjct: 229 LPPYYTISIRWLDSARISRLCSVLDGIWSEQVGQEVVYQWVEWLQMSSLAYLQSDKEIML 288
Query: 927 GPLYMPHSGDRRAVSRSVSPEVDIPSMMNYNDDKCHEVFWQNMHECCICFGEHAGTEFIR 748
GP HSGD RAVS VSPEVD+P+++NY++ + E F N+ ECCIC ++AG +F+R
Sbjct: 289 GPYDKGHSGDTRAVSGIVSPEVDVPAIINYDNQRRDEDFCMNLQECCICLSQYAGAKFVR 348
Query: 747 LPCKHFYCWKCMEAYSSIHVKEGTINKLLCPDAKCGGMVPPGLLKHLLGDENYERWESLL 568
LPCKH++CWKCME YSS+HVKEGT++KL CPDAKC MVPPGLLK LLGDE +ERWES++
Sbjct: 349 LPCKHYFCWKCMETYSSMHVKEGTVSKLNCPDAKCDVMVPPGLLKQLLGDEEFERWESMM 408
Query: 567 LQKTLASMSDVIYCPRCETACLEDEDHNGQCSKCLYSFCSLCGDRRHVGSTCMSPELKLL 388
L KTL SMSDV+YCPRCET CLED DH+ QCSKC +SFC+LC +RRHVG CM+PE+KL
Sbjct: 409 LTKTLESMSDVVYCPRCETPCLEDVDHDAQCSKCYFSFCTLCSERRHVGIECMTPEMKLR 468
Query: 387 LLQARQGSSQLKEDQRRKEREMINDILSIREILRDAKQCPSCKMAISRTEGCNKIVCENC 208
LL+ RQ SSQL +QRRKEREMIN+++S++EILRDAKQCPSCKMAISRTEGCNK+VC NC
Sbjct: 469 LLEERQNSSQLGSEQRRKEREMINELISVKEILRDAKQCPSCKMAISRTEGCNKMVCNNC 528
Query: 207 GKFFCYRCNKAIDGYEHFRQDGCELFPREEIQQWEERMNGRQLVGQIQAELYAAHGHSCP 28
G++FCYRC+KAIDGY+HFR+ CELFP+E IQQWEERMN RQ++GQIQAEL+ +GH CP
Sbjct: 529 GQYFCYRCSKAIDGYDHFREGSCELFPQEAIQQWEERMNARQVLGQIQAELFPENGHPCP 588
Query: 27 LCGQMNAKV 1
CGQ+NAKV
Sbjct: 589 NCGQLNAKV 597
>ref|XP_002326535.1| predicted protein [Populus trichocarpa] gi|222833857|gb|EEE72334.1|
predicted protein [Populus trichocarpa]
Length = 642
Score = 694 bits (1792), Expect = 0.0
Identities = 321/490 (65%), Positives = 395/490 (80%), Gaps = 1/490 (0%)
Frame = -1
Query: 1467 EQLRVSEQEPDLSEEQLRINDQLQEDELLAMEAIYGENLSILREEGGLRVFEIYIHIETP 1288
E+ + +EP+LSEEQLRINDQLQEDELLAME+IYG+N IL + GLR F+I+IHIE P
Sbjct: 127 EEFFLGVEEPELSEEQLRINDQLQEDELLAMESIYGDNTFILERQRGLRSFQIHIHIEVP 186
Query: 1287 DELTISAKLLS-SNGNAKLGMKSSSSLVTAECSNEFVYHFKVEHLPPIILRCLLPKSYPS 1111
E T++AKL S + N K G S+EF Y F+V++LPPI+L CLLPKSYPS
Sbjct: 187 AEFTVTAKLYSLGDCNGKSGS-----------SDEFSYSFEVQYLPPIVLTCLLPKSYPS 235
Query: 1110 HQPPYFTIAIQWLDSQRISNLCIMLDSLWTDQPGQEVIYQWVEWLQSSSLSYLGINKELV 931
H PPYFTI++QWLDS IS+LC MLDS+WT+QPG EVIYQW +WLQ+ SLS+LGI+K+++
Sbjct: 236 HLPPYFTISVQWLDSTSISHLCSMLDSIWTEQPGLEVIYQWADWLQNYSLSFLGIDKDII 295
Query: 930 LGPLYMPHSGDRRAVSRSVSPEVDIPSMMNYNDDKCHEVFWQNMHECCICFGEHAGTEFI 751
LGP H DRRA+S SVS EVD+PS+ +YN ++CHE F +N+HECCIC + +FI
Sbjct: 296 LGPCVTKHKKDRRAISGSVSLEVDVPSLRSYNAEQCHENFCKNLHECCICCDD----DFI 351
Query: 750 RLPCKHFYCWKCMEAYSSIHVKEGTINKLLCPDAKCGGMVPPGLLKHLLGDENYERWESL 571
RLPC+HF+C KCM+ YS IHV EGT+NKL CPDAKCG MVPPGLLK LLGDE YERWESL
Sbjct: 352 RLPCQHFFCPKCMKRYSDIHVAEGTVNKLQCPDAKCGVMVPPGLLKRLLGDEEYERWESL 411
Query: 570 LLQKTLASMSDVIYCPRCETACLEDEDHNGQCSKCLYSFCSLCGDRRHVGSTCMSPELKL 391
+LQKTL SMSDV YCPRCET C+EDE+ + QCSKCLYSFC+LC +RRH+G CM+PE+KL
Sbjct: 412 MLQKTLESMSDVSYCPRCETPCIEDEEQHAQCSKCLYSFCTLCRERRHLGEVCMTPEMKL 471
Query: 390 LLLQARQGSSQLKEDQRRKEREMINDILSIREILRDAKQCPSCKMAISRTEGCNKIVCEN 211
+L+ RQ SS LK+ Q+ +EREMIN++LS++EILRDAKQCPSCKMAISRTEGCNK+VC+N
Sbjct: 472 QVLEERQNSSHLKDGQKHREREMINELLSVKEILRDAKQCPSCKMAISRTEGCNKMVCKN 531
Query: 210 CGKFFCYRCNKAIDGYEHFRQDGCELFPREEIQQWEERMNGRQLVGQIQAELYAAHGHSC 31
C +FFCYRCNK IDGY+HF+ CELFP+EEIQQWEERMN R++V ++ AEL+ H ++C
Sbjct: 532 CEQFFCYRCNKGIDGYDHFKDGQCELFPQEEIQQWEERMNPRRVVAEVHAELFPDHVNAC 591
Query: 30 PLCGQMNAKV 1
P CGQ N KV
Sbjct: 592 PNCGQFNVKV 601
>ref|XP_002527660.1| ring finger protein, putative [Ricinus communis]
gi|223532965|gb|EEF34731.1| ring finger protein, putative
[Ricinus communis]
Length = 578
Score = 664 bits (1713), Expect = 0.0
Identities = 306/464 (65%), Positives = 375/464 (80%)
Frame = -1
Query: 1395 EDELLAMEAIYGENLSILREEGGLRVFEIYIHIETPDELTISAKLLSSNGNAKLGMKSSS 1216
+ ELL ME+IYGEN+ IL ++GGLR F+I IHIE EL+++AKL N L MKS S
Sbjct: 15 QSELLVMESIYGENVFILNKKGGLRSFQILIHIEATGELSVTAKL---NSLQDLKMKSES 71
Query: 1215 SLVTAECSNEFVYHFKVEHLPPIILRCLLPKSYPSHQPPYFTIAIQWLDSQRISNLCIML 1036
++ Y F++++LPPI+L LLPKSYPSH PPYFTI++QWLDS +ISNLC ML
Sbjct: 72 ---------DYSYSFRIQYLPPIVLTFLLPKSYPSHLPPYFTISVQWLDSIKISNLCSML 122
Query: 1035 DSLWTDQPGQEVIYQWVEWLQSSSLSYLGINKELVLGPLYMPHSGDRRAVSRSVSPEVDI 856
D++W ++PGQE+IYQWVEWLQ+SSLS+LG ++E+ LGP HS D RAVS SVSPEVDI
Sbjct: 123 DTIWMEKPGQEIIYQWVEWLQTSSLSHLGADQEITLGPYV--HSEDMRAVSGSVSPEVDI 180
Query: 855 PSMMNYNDDKCHEVFWQNMHECCICFGEHAGTEFIRLPCKHFYCWKCMEAYSSIHVKEGT 676
PS+ +YND+KCHE F N+HEC IC+ E+ G++FIRLPC+HF+C CM+ Y IHV EGT
Sbjct: 181 PSLRSYNDEKCHENFRLNLHECLICYSEYTGSDFIRLPCQHFFCCTCMKTYCGIHVTEGT 240
Query: 675 INKLLCPDAKCGGMVPPGLLKHLLGDENYERWESLLLQKTLASMSDVIYCPRCETACLED 496
+NKL CPDAKCGGMVPPGLLK LLGDE YERWESL+LQKTL SMSDV YCPRCET C+ED
Sbjct: 241 VNKLQCPDAKCGGMVPPGLLKQLLGDEEYERWESLMLQKTLDSMSDVAYCPRCETPCIED 300
Query: 495 EDHNGQCSKCLYSFCSLCGDRRHVGSTCMSPELKLLLLQARQGSSQLKEDQRRKEREMIN 316
ED + QCSKC +SFC+LC +R HVG C++PEL+L +L+ RQ SQLK+ Q+ +EREMIN
Sbjct: 301 EDQHAQCSKCFFSFCTLCRERLHVGEVCLTPELRLRVLEERQNLSQLKDKQKLREREMIN 360
Query: 315 DILSIREILRDAKQCPSCKMAISRTEGCNKIVCENCGKFFCYRCNKAIDGYEHFRQDGCE 136
++LS++EI RDAKQCPSCKMAISRTEGCNK+VC NCG++FCYRCNKAIDGY+HFR D CE
Sbjct: 361 ELLSLKEIHRDAKQCPSCKMAISRTEGCNKMVCNNCGRYFCYRCNKAIDGYDHFR-DACE 419
Query: 135 LFPREEIQQWEERMNGRQLVGQIQAELYAAHGHSCPLCGQMNAK 4
LFPRE I+QWE +MN RQ+V Q+QAEL++ H H CP CGQ NAK
Sbjct: 420 LFPREAIEQWERQMNARQIVAQVQAELFSEHAHRCPNCGQDNAK 463
Score = 70.5 bits (171), Expect = 1e-09
Identities = 36/67 (53%), Positives = 45/67 (67%), Gaps = 4/67 (5%)
Frame = -1
Query: 1104 PPYFTIAIQ--WLDSQRISNLCIMLDS--LWTDQPGQEVIYQWVEWLQSSSLSYLGINKE 937
PPY ++ WLDS R SNLC ML+ +W + PGQEV+YQWVEWLQ+ S+LG N E
Sbjct: 506 PPYLKRKVKDLWLDSIRTSNLCSMLELYIIWMELPGQEVLYQWVEWLQT---SHLGANHE 562
Query: 936 LVLGPLY 916
+ LG Y
Sbjct: 563 MTLGESY 569