BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009076
         (739 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631250.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-...   165   1e-38
ref|XP_003601903.1| RING-H2 finger protein [Medicago truncatula]...   162   7e-38
gb|AEG64816.1| RING-H2 type zinc finger [Avicennia marina]            154   2e-35
ref|XP_002314594.1| predicted protein [Populus trichocarpa] gi|2...   152   5e-35
ref|XP_003551995.1| PREDICTED: E3 ubiquitin-protein ligase RNF18...   149   6e-34

>ref|XP_003631250.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-like [Vitis vinifera]
           gi|296081356|emb|CBI16789.3| unnamed protein product
           [Vitis vinifera]
          Length = 138

 Score =  165 bits (417), Expect = 1e-38
 Identities = 85/148 (57%), Positives = 106/148 (71%), Gaps = 3/148 (2%)
 Frame = +1

Query: 88  MGLSHYPSAAEGMLPVLVMNTVISVAIIKNMVRWVLQVMGCAENTSDFEANTSIEG---C 258
           MGLS++ S AEG+LPVLVMNTV+SVA++KNMVR VLQVMG   ++ + E + S E     
Sbjct: 1   MGLSNFHSPAEGVLPVLVMNTVMSVALLKNMVRSVLQVMGANGSSPNLEEDPSNEEYSPM 60

Query: 259 AESLRKRRISSTLFKSLCNNGSRIGARSASGDQGSCSHWCPIMECCVCLHKFEAHEEVSE 438
           +E+ ++RR+S T FKSL            S   G+ + WC  M+CCVCL +FEA EEVSE
Sbjct: 61  SENAKERRVSVTQFKSL------------SHSSGTGTGWCSSMDCCVCLCRFEAEEEVSE 108

Query: 439 LSCKHFFHKGCLEKWLDHKHSTCPLCRS 522
           LSCKHFFHKGC EKW D+KHS+CPLCRS
Sbjct: 109 LSCKHFFHKGCWEKWFDNKHSSCPLCRS 136


>ref|XP_003601903.1| RING-H2 finger protein [Medicago truncatula]
           gi|355490951|gb|AES72154.1| RING-H2 finger protein
           [Medicago truncatula]
          Length = 151

 Score =  162 bits (410), Expect = 7e-38
 Identities = 82/154 (53%), Positives = 109/154 (70%), Gaps = 9/154 (5%)
 Frame = +1

Query: 88  MGLSHYPSAAEGMLPVLVMNTVISVAIIKNMVRWVLQVMGCAENTSDFEANTSIEGCAE- 264
           MGLS++P AAEG++PV+VMNTV+S+ ++KNM R +LQV+GC   T+   +   +E   E 
Sbjct: 1   MGLSNFPYAAEGVVPVIVMNTVLSMVLLKNMFRSMLQVVGCTSTTNSSYSPNIMEELEEE 60

Query: 265 --------SLRKRRISSTLFKSLCNNGSRIGARSASGDQGSCSHWCPIMECCVCLHKFEA 420
                   + R+RR+S T +K LC N S I ARS+S    SC    P++ECCVCL  FEA
Sbjct: 61  QVYSQEISNSRERRVSITQYKFLCYNRSNI-ARSSS----SCGWTSPMVECCVCLSGFEA 115

Query: 421 HEEVSELSCKHFFHKGCLEKWLDHKHSTCPLCRS 522
           ++EVSEL CKHFFH+GCL+KW D+KHS+CPLCRS
Sbjct: 116 NQEVSELPCKHFFHRGCLDKWFDNKHSSCPLCRS 149


>gb|AEG64816.1| RING-H2 type zinc finger [Avicennia marina]
          Length = 150

 Score =  154 bits (389), Expect = 2e-35
 Identities = 80/148 (54%), Positives = 99/148 (66%), Gaps = 3/148 (2%)
 Frame = +1

Query: 88  MGLSHYPSAAEGMLPVLVMNTVISVAIIKNMVRWVLQVMGCAENTSDFEANTSI-EGCAE 264
           MGLS++ S AEG+L +LVMNTV+SVAI+KN +R VLQV+G     SD E      E  + 
Sbjct: 1   MGLSNFSSPAEGVLHLLVMNTVMSVAIVKNKLRSVLQVVGAGGGDSDQEFEEEYGEDESG 60

Query: 265 SLRKRRISSTLFKSLCNNGSRIGARSASGDQ--GSCSHWCPIMECCVCLHKFEAHEEVSE 438
             R RR+S T + SLC +      R   G    G   +W P +ECCVCL +FEA EEVSE
Sbjct: 61  GSRTRRVSVTRYGSLCRDRCGCSPRERGGSTAAGDGGYWPPAVECCVCLSRFEADEEVSE 120

Query: 439 LSCKHFFHKGCLEKWLDHKHSTCPLCRS 522
           LSCKHFFHKGCL+KW D+++ TCPLCRS
Sbjct: 121 LSCKHFFHKGCLDKWFDNQNITCPLCRS 148


>ref|XP_002314594.1| predicted protein [Populus trichocarpa] gi|222863634|gb|EEF00765.1|
           predicted protein [Populus trichocarpa]
          Length = 133

 Score =  152 bits (385), Expect = 5e-35
 Identities = 85/146 (58%), Positives = 102/146 (69%), Gaps = 1/146 (0%)
 Frame = +1

Query: 88  MGLSHYPSAAEGMLPVLVMNTVISVAIIKNMVRWVLQ-VMGCAENTSDFEANTSIEGCAE 264
           MGLS +P AAEG+LPVLVMNTV+SVA++K+MVR VLQ V+G      D+E     E   E
Sbjct: 1   MGLSSFPGAAEGVLPVLVMNTVLSVALLKSMVRSVLQLVVGANWTPPDYEEEPD-EYRRE 59

Query: 265 SLRKRRISSTLFKSLCNNGSRIGARSASGDQGSCSHWCPIMECCVCLHKFEAHEEVSELS 444
           + R+RRIS T FKSL  N    GAR+++            MECCVCL  FEA EEVSELS
Sbjct: 60  NARERRISITQFKSLNQNDG--GARNSA------------MECCVCLCGFEAEEEVSELS 105

Query: 445 CKHFFHKGCLEKWLDHKHSTCPLCRS 522
           CKHFFH+GCL+KW D+ H+TCPLCRS
Sbjct: 106 CKHFFHRGCLDKWFDNIHATCPLCRS 131


>ref|XP_003551995.1| PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Glycine max]
          Length = 134

 Score =  149 bits (376), Expect = 6e-34
 Identities = 78/148 (52%), Positives = 107/148 (72%), Gaps = 3/148 (2%)
 Frame = +1

Query: 88  MGLSHYPSAAEGMLPVLVMNTVISVAIIKNMVRWVLQVM---GCAENTSDFEANTSIEGC 258
           MGLS++PSA+EG+LPVLV+NTV+SVA++KNM R +LQV+     A N S+ E + S    
Sbjct: 1   MGLSNFPSASEGVLPVLVINTVLSVAVLKNMFRSMLQVVLGGSAAANGSNIEHDES---- 56

Query: 259 AESLRKRRISSTLFKSLCNNGSRIGARSASGDQGSCSHWCPIMECCVCLHKFEAHEEVSE 438
           + S  +RR+S T +KSLC++   IG  S +           ++ECCVCL +FEA++EVSE
Sbjct: 57  SSSSWERRVSITQYKSLCHSHD-IGGTSMA-----------MVECCVCLCRFEANQEVSE 104

Query: 439 LSCKHFFHKGCLEKWLDHKHSTCPLCRS 522
           L CKH+FH+GCL+KW D+KH+TCPLCRS
Sbjct: 105 LPCKHYFHRGCLDKWFDNKHTTCPLCRS 132