BLASTX nr result

ID: Coptis25_contig00009065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009065
         (688 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525356.1| sentrin/sumo-specific protease, putative [Ri...   278   5e-73
ref|XP_003530651.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin-li...   276   2e-72
ref|XP_003551198.1| PREDICTED: ubiquitin-like-specific protease ...   276   4e-72
ref|XP_003631300.1| PREDICTED: ubiquitin-like-specific protease ...   270   1e-70
emb|CBI32142.3| unnamed protein product [Vitis vinifera]              270   1e-70

>ref|XP_002525356.1| sentrin/sumo-specific protease, putative [Ricinus communis]
           gi|223535319|gb|EEF36994.1| sentrin/sumo-specific
           protease, putative [Ricinus communis]
          Length = 283

 Score =  278 bits (712), Expect = 5e-73
 Identities = 126/196 (64%), Positives = 162/196 (82%)
 Frame = +3

Query: 6   NDKDLLFSKFRRWWKGVNIFEKSYILLPIHESLHWSLVIICLPNKDDESGPIILHLDSLG 185
           +DK+  F KFRRWWKGVNIF+K+Y+ +PIH+ LHWSLVIIC+P+K+DESGPIILHLDSLG
Sbjct: 89  SDKESFFIKFRRWWKGVNIFQKAYVFIPIHDDLHWSLVIICIPDKEDESGPIILHLDSLG 148

Query: 186 YHLSSQIFQNVRSFLKEEWNYLKETNAPTNVPMAERIWKHLPRRIDERIIMVPQQKNDYD 365
            H S ++F+ ++S+L++EWNY+ +  AP+++P+AERIWK LPRRI+E+ I VPQQKNDYD
Sbjct: 149 LHSSKEVFEEIKSYLRQEWNYMNQEVAPSDIPIAERIWKRLPRRIEEKKIEVPQQKNDYD 208

Query: 366 CGIFVLYFMERFIEEAPERLRKDDLDMFGRKWFKPEEASRLRGRIRELLKEEFDNPITVN 545
           CG+FVLYFMERFIEEAPERL+K DL MFG++WF+PEEAS LR +IR+LL +EF N     
Sbjct: 209 CGLFVLYFMERFIEEAPERLKKKDLAMFGKRWFRPEEASGLRVKIRKLLLDEFKN-ANDT 267

Query: 546 NNGRESSPTSSGDGSP 593
           ++  ES    SG  SP
Sbjct: 268 DSVSESPHLPSGVASP 283


>ref|XP_003530651.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin-like-specific protease
           1D-like [Glycine max]
          Length = 594

 Score =  276 bits (707), Expect = 2e-72
 Identities = 127/200 (63%), Positives = 163/200 (81%)
 Frame = +3

Query: 21  LFSKFRRWWKGVNIFEKSYILLPIHESLHWSLVIICLPNKDDESGPIILHLDSLGYHLSS 200
           +F+KFRRWWKGVNIF+K+Y+L+PIHE LHWSL+IIC+P+K+DESGPIILHLDSLG H S 
Sbjct: 379 IFAKFRRWWKGVNIFQKAYVLIPIHEDLHWSLIIICIPDKEDESGPIILHLDSLGLHSSK 438

Query: 201 QIFQNVRSFLKEEWNYLKETNAPTNVPMAERIWKHLPRRIDERIIMVPQQKNDYDCGIFV 380
            +F N++S+L EE NY+   +  ++V +A+RIWK LPRRI+ +II VPQQKNDYDCG+FV
Sbjct: 439 SVFDNIKSYLIEEKNYMDREDMASDVSIADRIWKCLPRRIESQIIQVPQQKNDYDCGLFV 498

Query: 381 LYFMERFIEEAPERLRKDDLDMFGRKWFKPEEASRLRGRIRELLKEEFDNPITVNNNGRE 560
           LYF+ERF+EEAPERL+  DLDMFGR+WFKP+EAS LR +IR+LL E+  N +T N N  E
Sbjct: 499 LYFIERFMEEAPERLKMKDLDMFGRRWFKPQEASNLRVKIRKLLVEKLQNSVTDNCN-LE 557

Query: 561 SSPTSSGDGSPNCTEEEFDN 620
           SSP+SS   + +C E   D+
Sbjct: 558 SSPSSSAGPATDCVETARDS 577


>ref|XP_003551198.1| PREDICTED: ubiquitin-like-specific protease 1D-like [Glycine max]
          Length = 586

 Score =  276 bits (705), Expect = 4e-72
 Identities = 126/205 (61%), Positives = 166/205 (80%)
 Frame = +3

Query: 6   NDKDLLFSKFRRWWKGVNIFEKSYILLPIHESLHWSLVIICLPNKDDESGPIILHLDSLG 185
           +D++++F+KFRRWWKGVNIF+K+Y+L+PIHE LHWSL+IIC+P+K+ ESGPIILHLDSLG
Sbjct: 366 SDREMIFAKFRRWWKGVNIFQKAYVLIPIHEDLHWSLIIICIPDKEYESGPIILHLDSLG 425

Query: 186 YHLSSQIFQNVRSFLKEEWNYLKETNAPTNVPMAERIWKHLPRRIDERIIMVPQQKNDYD 365
            H S  +F N++S+L EE NY+   +   +V +A+RIWK LPRRI+ +II VPQQKN+YD
Sbjct: 426 LHSSKSVFDNIKSYLIEEKNYMDREDVSLDVSIADRIWKCLPRRIESQIIQVPQQKNEYD 485

Query: 366 CGIFVLYFMERFIEEAPERLRKDDLDMFGRKWFKPEEASRLRGRIRELLKEEFDNPITVN 545
           CG+FVLYF+ERF+EEAPERL++ DLDMFGR+WFKP+EAS LR +I +LL E+  N IT N
Sbjct: 486 CGLFVLYFIERFMEEAPERLKRKDLDMFGRRWFKPQEASNLRVKILKLLLEKLQNSITDN 545

Query: 546 NNGRESSPTSSGDGSPNCTEEEFDN 620
            N  ESSP+SS   + +C E   D+
Sbjct: 546 CNS-ESSPSSSAGPATDCVETARDS 569


>ref|XP_003631300.1| PREDICTED: ubiquitin-like-specific protease 1D-like [Vitis
           vinifera]
          Length = 304

 Score =  270 bits (691), Expect = 1e-70
 Identities = 121/175 (69%), Positives = 149/175 (85%)
 Frame = +3

Query: 6   NDKDLLFSKFRRWWKGVNIFEKSYILLPIHESLHWSLVIICLPNKDDESGPIILHLDSLG 185
           +DK+  F KFRRWWKGVNIF+K+YILLPIH+  HWSLVIIC+P+K+DE+GPIILHLDSLG
Sbjct: 42  SDKETSFIKFRRWWKGVNIFQKAYILLPIHQDHHWSLVIICIPDKEDEAGPIILHLDSLG 101

Query: 186 YHLSSQIFQNVRSFLKEEWNYLKETNAPTNVPMAERIWKHLPRRIDERIIMVPQQKNDYD 365
            H S  IF +++S+LKEEW YL +     ++P+A+RIWKHLPRRI+E++I VPQQKNDYD
Sbjct: 102 LHYSRPIFDDIKSYLKEEWKYLNQEADSADLPIADRIWKHLPRRIEEKVIAVPQQKNDYD 161

Query: 366 CGIFVLYFMERFIEEAPERLRKDDLDMFGRKWFKPEEASRLRGRIRELLKEEFDN 530
           CG+FVL+FMERFIEEAPERL+K DL MFG++WFKPEEAS LR +IR LL +E  N
Sbjct: 162 CGLFVLFFMERFIEEAPERLKKKDLAMFGKQWFKPEEASGLRVKIRNLLMKELQN 216


>emb|CBI32142.3| unnamed protein product [Vitis vinifera]
          Length = 221

 Score =  270 bits (691), Expect = 1e-70
 Identities = 121/175 (69%), Positives = 149/175 (85%)
 Frame = +3

Query: 6   NDKDLLFSKFRRWWKGVNIFEKSYILLPIHESLHWSLVIICLPNKDDESGPIILHLDSLG 185
           +DK+  F KFRRWWKGVNIF+K+YILLPIH+  HWSLVIIC+P+K+DE+GPIILHLDSLG
Sbjct: 42  SDKETSFIKFRRWWKGVNIFQKAYILLPIHQDHHWSLVIICIPDKEDEAGPIILHLDSLG 101

Query: 186 YHLSSQIFQNVRSFLKEEWNYLKETNAPTNVPMAERIWKHLPRRIDERIIMVPQQKNDYD 365
            H S  IF +++S+LKEEW YL +     ++P+A+RIWKHLPRRI+E++I VPQQKNDYD
Sbjct: 102 LHYSRPIFDDIKSYLKEEWKYLNQEADSADLPIADRIWKHLPRRIEEKVIAVPQQKNDYD 161

Query: 366 CGIFVLYFMERFIEEAPERLRKDDLDMFGRKWFKPEEASRLRGRIRELLKEEFDN 530
           CG+FVL+FMERFIEEAPERL+K DL MFG++WFKPEEAS LR +IR LL +E  N
Sbjct: 162 CGLFVLFFMERFIEEAPERLKKKDLAMFGKQWFKPEEASGLRVKIRNLLMKELQN 216


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