BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009051
         (1129 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]                 271   e-111
gb|AAM94350.1| gag-pol polyprotein [Zea mays]                         264   e-102
emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]   298   2e-78
emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera]   298   2e-78
emb|CAN80487.1| hypothetical protein VITISV_043198 [Vitis vinifera]   291   2e-76

>gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]
          Length = 1475

 Score =  271 bits (693), Expect(2) = e-111
 Identities = 126/175 (72%), Positives = 146/175 (83%)
 Frame = +2

Query: 605  IAPFTRYQHAIDLIPGAPLPNLPHYRMAPSEHAELQKQVTELLAKGFVRESMSPCAVPAL 784
            + P    +H ID IPGA LPN   YR  P    ELQ+Q+ EL++KGFVRES+SPC+VPAL
Sbjct: 586  LPPLRGIEHQIDFIPGATLPNKAAYRSDPKATQELQQQIGELVSKGFVRESLSPCSVPAL 645

Query: 785  LTPKKDGSWRMCVDSRAINKITVKYRFPIPRLEDMLDSLHGAKVFSKLDLRSGFHHIRIR 964
            L PKKDGSWRMC DSRAIN IT+KYRFPIPRL+D+LD L GA++FSK+DLR G+H +RI+
Sbjct: 646  LVPKKDGSWRMCTDSRAINNITIKYRFPIPRLDDILDELSGAQLFSKIDLRQGYHQVRIK 705

Query: 965  LGDEWKTAFKTKDGLYEWLVMPFGLSNAPSTFMRLMTQVLKPYLNKFCVVYFDDI 1129
             GDEWKTAFKTK GLYEWLVMPFGLSNAPSTFMRLMT+VL+PYL +F VVYFDDI
Sbjct: 706  EGDEWKTAFKTKHGLYEWLVMPFGLSNAPSTFMRLMTEVLRPYLGRFVVVYFDDI 760



 Score =  159 bits (403), Expect(2) = e-111
 Identities = 83/208 (39%), Positives = 110/208 (52%), Gaps = 12/208 (5%)
 Frame = +3

Query: 39   RHNIFRTRCTSNGMLCNVIIDSGSSDNIVSKDMVDKLKLKDEPHPEPYTISWLQDGATVK 218
            R  IFR+RCT  G +CN+IID GS  N+ S  +++KL L  + HP PY + WL  GA V+
Sbjct: 385  RQQIFRSRCTIKGRVCNLIIDGGSCTNVASSTLIEKLSLPTQDHPSPYKLRWLNKGAEVR 444

Query: 219  VTRRCLVSFSIGPKYKDDVWCSVAPMDACHLLLGRPWQYDLLVIHNGRENTYTFTSSGEK 398
            V ++CLV+FSIG  Y D+  C V PMDACHLLLGRPW++D   +H+GR+NTYTF     K
Sbjct: 445  VDKQCLVTFSIGKNYSDEALCDVLPMDACHLLLGRPWEFDRDSVHHGRDNTYTFKFRSRK 504

Query: 399  IVLAXXXXXXXXXXXXXXXXXG----------FLADGRHCGMFLALTAS--FLANPTTIP 542
            ++L                              L + +      AL A         ++P
Sbjct: 505  VILTPLPPVLKHTTPPSMLEPSKEVLLINEAEMLQELKGDEDVYALIAKDVVFGQNVSLP 564

Query: 543  PVLQPMLDSYSDVCTEPANGGLPPLRDI 626
              +Q +L SY DV       GLPPLR I
Sbjct: 565  KEVQELLQSYEDVFPNELPSGLPPLRGI 592


>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
          Length = 1618

 Score =  264 bits (674), Expect(2) = e-102
 Identities = 124/175 (70%), Positives = 144/175 (82%)
 Frame = +2

Query: 605  IAPFTRYQHAIDLIPGAPLPNLPHYRMAPSEHAELQKQVTELLAKGFVRESMSPCAVPAL 784
            + P    +H IDLIPGA LPN   YR  P E  E+Q+QV ELL KG+VRES+SPCAVP +
Sbjct: 703  LPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVQELLDKGYVRESLSPCAVPVI 762

Query: 785  LTPKKDGSWRMCVDSRAINKITVKYRFPIPRLEDMLDSLHGAKVFSKLDLRSGFHHIRIR 964
            L PKKDG+WRMCVD RAIN IT++YR PIPRL+DMLD L GA VFSK+DLRSG+H IR++
Sbjct: 763  LVPKKDGTWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGAIVFSKVDLRSGYHQIRMK 822

Query: 965  LGDEWKTAFKTKDGLYEWLVMPFGLSNAPSTFMRLMTQVLKPYLNKFCVVYFDDI 1129
            LGDEWKTAFKTK GLYEWLVMPFGL+NAPSTFMRLM +VL+ ++ KF VVYFDDI
Sbjct: 823  LGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIGKFVVVYFDDI 877



 Score =  136 bits (342), Expect(2) = e-102
 Identities = 82/232 (35%), Positives = 110/232 (47%), Gaps = 36/232 (15%)
 Frame = +3

Query: 39   RHNIFRTRCTSNGMLCNVIIDSGSSDNIVSKDMVDKLKLKDEPHPEPYTISWLQDGATVK 218
            RH +F+T+C      C +IID GS +N+ S DMV+KL L  +PHP PY I WL +   VK
Sbjct: 479  RHTLFQTKCVIKERSCRLIIDGGSCNNLASSDMVEKLALTTKPHPHPYHIQWLNNSGKVK 538

Query: 219  VTRRCLVSFSIGPKYKDDVWCSVAPMDACHLLLGRPWQYDLLVIHNGRENTYTFTSSGEK 398
            VT+   ++F+IG  Y+D V C V PMDAC++LLGRPWQ+D   +H+GR N Y+     +K
Sbjct: 539  VTKLVRINFAIG-SYRDVVDCDVVPMDACNILLGRPWQFDSDCMHHGRSNQYSLIHHDKK 597

Query: 399  IVL------------AXXXXXXXXXXXXXXXXXGFLADG----RHCGMFLALTASFLANP 530
            I+L                              G   DG     HC +      + L   
Sbjct: 598  IILLPMSPEAIVRDDVAKATKAKTENNKNIKVVGNNKDGIKLKGHCLLATKTDVNELFAS 657

Query: 531  TTI--------------------PPVLQPMLDSYSDVCTEPANGGLPPLRDI 626
            TT+                    PPV+  +L  YSDV       GLPP+R I
Sbjct: 658  TTVAYALVCKDALISIQDMQHSLPPVITNILQEYSDVFPSEIPEGLPPIRGI 709


>emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]
          Length = 1521

 Score =  298 bits (762), Expect = 2e-78
 Identities = 138/175 (78%), Positives = 157/175 (89%)
 Frame = +2

Query: 605  IAPFTRYQHAIDLIPGAPLPNLPHYRMAPSEHAELQKQVTELLAKGFVRESMSPCAVPAL 784
            + P    QHAIDLIPGA LPNLP YRM P+EHAEL++QV ELL KGF+RES+SPC VPAL
Sbjct: 605  LPPMRDIQHAIDLIPGASLPNLPAYRMNPTEHAELKRQVDELLTKGFIRESLSPCGVPAL 664

Query: 785  LTPKKDGSWRMCVDSRAINKITVKYRFPIPRLEDMLDSLHGAKVFSKLDLRSGFHHIRIR 964
            LTPKKDGSWRMCVDSRAINKIT+KYRFPIPRL+DMLD + G+ +FSK+DLRSG+H IRIR
Sbjct: 665  LTPKKDGSWRMCVDSRAINKITIKYRFPIPRLDDMLDMMVGSVIFSKIDLRSGYHQIRIR 724

Query: 965  LGDEWKTAFKTKDGLYEWLVMPFGLSNAPSTFMRLMTQVLKPYLNKFCVVYFDDI 1129
             GDEWKT+FKTKDGLYEWLVMPFGL+NAPSTFMR+MTQVLKP++ +F VVYFDDI
Sbjct: 725  PGDEWKTSFKTKDGLYEWLVMPFGLTNAPSTFMRIMTQVLKPFIGRFVVVYFDDI 779



 Score =  138 bits (347), Expect = 3e-30
 Identities = 85/247 (34%), Positives = 124/247 (50%), Gaps = 11/247 (4%)
 Frame = +3

Query: 6    PVVKHDPTSWLRHNIFRTRCTSNGMLCNVIIDSGSSDNIVSKDMVDKLKLKDEPHPEPYT 185
            P VK +   W R +IF+TR + +G LC +IID GSS NI S+++V+KL LK E HP P+ 
Sbjct: 396  PKVKGEE-DWRRISIFQTRISCHGRLCTMIIDGGSSLNIASQELVEKLNLKTERHPNPFR 454

Query: 186  ISWLQDGATVKVTRRCLVSFSIGPKYKDDVWCSVAPMDACHLLLGRPWQYDLLVIHNGRE 365
            ++W+ D  ++ V+ RCLV+F  G  +++ VWC V P+   H+LLGRPW +D  V H+G E
Sbjct: 455  VAWVND-TSIPVSFRCLVTFLFGKDFEESVWCEVLPIKVSHILLGRPWLFDRKVQHDGYE 513

Query: 366  NTYTFTSSGEKIVLAXXXXXXXXXXXXXXXXXG-------FLADGRHCGMFLALTA---- 512
            NTY    +G K +L                          F  + +   +  AL A    
Sbjct: 514  NTYALIHNGRKKILRPMKEVPPIKKSNENAQPKKVLTMCQFENESKETXVIFALMARKVE 573

Query: 513  SFLANPTTIPPVLQPMLDSYSDVCTEPANGGLPPLRDINMLLILFLELPSLTYHIIAWLL 692
             F       P   + +LD +SD+        LPP+RDI   + L   +P  +       L
Sbjct: 574  EFKEQDKEYPANARKILDDFSDLWPVELPNELPPMRDIQHAIDL---IPGAS-------L 623

Query: 693  LNTPSYR 713
             N P+YR
Sbjct: 624  PNLPAYR 630


>emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera]
          Length = 1392

 Score =  298 bits (762), Expect = 2e-78
 Identities = 138/175 (78%), Positives = 157/175 (89%)
 Frame = +2

Query: 605  IAPFTRYQHAIDLIPGAPLPNLPHYRMAPSEHAELQKQVTELLAKGFVRESMSPCAVPAL 784
            + P    QHAIDLIPGA LPNLP YRM P+EHAEL++QV ELL KGF+RES+SPC VPAL
Sbjct: 564  LPPMRDIQHAIDLIPGASLPNLPAYRMNPTEHAELKRQVDELLTKGFIRESLSPCGVPAL 623

Query: 785  LTPKKDGSWRMCVDSRAINKITVKYRFPIPRLEDMLDSLHGAKVFSKLDLRSGFHHIRIR 964
            LTPKKDGSWRMCVDSRAINKIT+KYRFPIPRL+DMLD + G+ +FSK+DLRSG+H IRIR
Sbjct: 624  LTPKKDGSWRMCVDSRAINKITIKYRFPIPRLDDMLDMMVGSVIFSKIDLRSGYHQIRIR 683

Query: 965  LGDEWKTAFKTKDGLYEWLVMPFGLSNAPSTFMRLMTQVLKPYLNKFCVVYFDDI 1129
             GDEWKT+FKTKDGLYEWLVMPFGL+NAPSTFMR+MTQVLKP++ +F VVYFDDI
Sbjct: 684  PGDEWKTSFKTKDGLYEWLVMPFGLTNAPSTFMRIMTQVLKPFIGRFVVVYFDDI 738



 Score =  132 bits (332), Expect = 2e-28
 Identities = 62/134 (46%), Positives = 88/134 (65%)
 Frame = +3

Query: 6   PVVKHDPTSWLRHNIFRTRCTSNGMLCNVIIDSGSSDNIVSKDMVDKLKLKDEPHPEPYT 185
           P VK +   W R +IF+TR +  G LC +IID GSS NI S+++V+KL LK E HP P+ 
Sbjct: 407 PKVKGEE-DWRRTSIFQTRISCQGRLCTMIIDGGSSLNIASQELVEKLNLKTERHPNPFR 465

Query: 186 ISWLQDGATVKVTRRCLVSFSIGPKYKDDVWCSVAPMDACHLLLGRPWQYDLLVIHNGRE 365
           ++W+ D  ++ V+ RCLV+F  G  +++ VWC V P+   H+LLGRPW +D  V H+G E
Sbjct: 466 VAWVND-TSIPVSFRCLVTFLFGKDFEESVWCEVLPIKVSHILLGRPWLFDRKVQHDGYE 524

Query: 366 NTYTFTSSGEKIVL 407
           NTY    +G K +L
Sbjct: 525 NTYALIHNGRKKIL 538


>emb|CAN80487.1| hypothetical protein VITISV_043198 [Vitis vinifera]
          Length = 1499

 Score =  291 bits (746), Expect = 2e-76
 Identities = 137/175 (78%), Positives = 154/175 (88%)
 Frame = +2

Query: 605  IAPFTRYQHAIDLIPGAPLPNLPHYRMAPSEHAELQKQVTELLAKGFVRESMSPCAVPAL 784
            + P    QHAIDLIPGA LPNLP YRM P+EHAEL++QV ELL KGF+RES+SPC VPAL
Sbjct: 538  LPPMRDVQHAIDLIPGASLPNLPAYRMNPTEHAELKRQVDELLTKGFIRESLSPCGVPAL 597

Query: 785  LTPKKDGSWRMCVDSRAINKITVKYRFPIPRLEDMLDSLHGAKVFSKLDLRSGFHHIRIR 964
            LTPKKDGSWRMCVDSRAINKIT+KYRFPIPRL+DMLD + G+ +FSK+DLRSG+H I IR
Sbjct: 598  LTPKKDGSWRMCVDSRAINKITIKYRFPIPRLDDMLDMMVGSVIFSKIDLRSGYHQICIR 657

Query: 965  LGDEWKTAFKTKDGLYEWLVMPFGLSNAPSTFMRLMTQVLKPYLNKFCVVYFDDI 1129
             GDEWKT+FKTKDGLYEWLVMPFGL+NAPSTFMR MTQVLKP++  F VVYFDDI
Sbjct: 658  SGDEWKTSFKTKDGLYEWLVMPFGLTNAPSTFMRSMTQVLKPFIGWFVVVYFDDI 712



 Score =  124 bits (312), Expect = 3e-26
 Identities = 58/130 (44%), Positives = 84/130 (64%)
 Frame = +3

Query: 6   PVVKHDPTSWLRHNIFRTRCTSNGMLCNVIIDSGSSDNIVSKDMVDKLKLKDEPHPEPYT 185
           P VK +   W R +IF+TR +  G LC +IID GSS NI S+++V+KL LK E HP P+ 
Sbjct: 406 PKVKXEE-DWRRTSIFQTRISCQGRLCTMIIDGGSSLNIASQELVEKLNLKTERHPNPFR 464

Query: 186 ISWLQDGATVKVTRRCLVSFSIGPKYKDDVWCSVAPMDACHLLLGRPWQYDLLVIHNGRE 365
           ++W+ D  ++ V+ RCLV+F  G  +++ VWC V  +   H+LLGRPW +D  V H+G E
Sbjct: 465 VAWVND-TSIPVSFRCLVTFLFGKDFEESVWCEVLSIKVSHILLGRPWLFDRRVQHDGYE 523

Query: 366 NTYTFTSSGE 395
           N Y    +G+
Sbjct: 524 NXYALIHNGQ 533