BLASTX nr result

ID: Coptis25_contig00009048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009048
         (871 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305283.1| predicted protein [Populus trichocarpa] gi|2...   308   8e-82
ref|XP_002530392.1| conserved hypothetical protein [Ricinus comm...   305   7e-81
ref|XP_004156184.1| PREDICTED: thylakoid membrane protein slr057...   303   4e-80
ref|XP_004141498.1| PREDICTED: thylakoid membrane protein slr057...   303   4e-80
ref|XP_002283351.1| PREDICTED: thylakoid membrane protein slr057...   300   4e-79

>ref|XP_002305283.1| predicted protein [Populus trichocarpa] gi|222848247|gb|EEE85794.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score =  308 bits (790), Expect = 8e-82
 Identities = 156/223 (69%), Positives = 178/223 (79%)
 Frame = +2

Query: 152 KPVQLKLIVIAKAADSTQAPXXXXXXTTGKAVVEDTEFTLAKXXXXXXXXXXXXXXXXXX 331
           +P ++KL+ + KAADS+QA       T  K ++ D EF+LAK                  
Sbjct: 4   QPHRVKLVFLTKAADSSQASPSSTA-TASKTIITDDEFSLAKVSFGVIGLGFGISLLSYG 62

Query: 332 XXAYFNILPGSEWSAIMLTYGFPLAVIGMALKYAELKPVPCITYSDAAMLREKCATPILK 511
             AYFNILPGSEWSAIMLTYGFPLA+IGMALKYAELKPVPC+TYSDA MLREKCATPILK
Sbjct: 63  FGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYSDAEMLREKCATPILK 122

Query: 512 QVRNDVIRFRYGDEQHLEEALKRIFQYGLGGGIPRRSAPMLELIREEVTEDGRYSLVLVF 691
           QVRNDVIR+RYGDEQHL+EALKRIFQYGLGGGIPRR+AP+L++IREEVTEDG+Y LVLVF
Sbjct: 123 QVRNDVIRYRYGDEQHLDEALKRIFQYGLGGGIPRRNAPILQMIREEVTEDGKYCLVLVF 182

Query: 692 KAKDLQLSDFEKRQAKFASFFGPGITAEIGIDDNGLFEVRLTS 820
           ++K LQLSDFEKRQ KF SFFGP ITAEIG  +N L+EVRL S
Sbjct: 183 ESKALQLSDFEKRQGKFTSFFGPDITAEIGKGENNLYEVRLVS 225


>ref|XP_002530392.1| conserved hypothetical protein [Ricinus communis]
           gi|223530078|gb|EEF31998.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 275

 Score =  305 bits (782), Expect = 7e-81
 Identities = 157/223 (70%), Positives = 178/223 (79%)
 Frame = +2

Query: 164 LKLIVIAKAADSTQAPXXXXXXTTGKAVVEDTEFTLAKXXXXXXXXXXXXXXXXXXXXAY 343
           +KL+ +AKAADSTQ        +T KA+V D EF+LAK                    AY
Sbjct: 52  VKLVFVAKAADSTQPSTA----STAKAIVSDEEFSLAKVSFGVIGLGVGISLLSYGFGAY 107

Query: 344 FNILPGSEWSAIMLTYGFPLAVIGMALKYAELKPVPCITYSDAAMLREKCATPILKQVRN 523
           FNILPGSEWSAIMLTYGFPLA+IGMALKYAELKPVPC+TYSDA MLRE  ATPILKQVRN
Sbjct: 108 FNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYSDAQMLRETSATPILKQVRN 167

Query: 524 DVIRFRYGDEQHLEEALKRIFQYGLGGGIPRRSAPMLELIREEVTEDGRYSLVLVFKAKD 703
           DVIR+RYGDEQHL+EALKRIFQYG GGGIPRRSAP+L++IREEVTEDG+Y LVLVF+AK 
Sbjct: 168 DVIRYRYGDEQHLDEALKRIFQYGQGGGIPRRSAPILQMIREEVTEDGKYCLVLVFEAKA 227

Query: 704 LQLSDFEKRQAKFASFFGPGITAEIGIDDNGLFEVRLTSDTTL 832
           L+L DFEKRQAKFASFFGP ITAE+G  DN L+EVRL S+ ++
Sbjct: 228 LELLDFEKRQAKFASFFGPNITAEVGKGDNDLYEVRLISNLSV 270


>ref|XP_004156184.1| PREDICTED: thylakoid membrane protein slr0575-like [Cucumis
           sativus]
          Length = 294

 Score =  303 bits (775), Expect = 4e-80
 Identities = 159/225 (70%), Positives = 175/225 (77%)
 Frame = +2

Query: 152 KPVQLKLIVIAKAADSTQAPXXXXXXTTGKAVVEDTEFTLAKXXXXXXXXXXXXXXXXXX 331
           KP +L      +AADSTQ        + GKAVV D EF+LAK                  
Sbjct: 66  KPHRLPFSFSTRAADSTQPSAVSA--SPGKAVVTDDEFSLAKVSFGVIGLGVGVSLLSYG 123

Query: 332 XXAYFNILPGSEWSAIMLTYGFPLAVIGMALKYAELKPVPCITYSDAAMLREKCATPILK 511
             AYFNILPGSEWSAIMLTYGFPLA+IGMALKYAELKPVPC+TY DA  LRE CATPILK
Sbjct: 124 FGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILK 183

Query: 512 QVRNDVIRFRYGDEQHLEEALKRIFQYGLGGGIPRRSAPMLELIREEVTEDGRYSLVLVF 691
           QVR+DVIRFRYGDEQHL+EALKRIFQYGL GGIPRRSAP+L+ IREEVTEDG+Y LVLVF
Sbjct: 184 QVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVF 243

Query: 692 KAKDLQLSDFEKRQAKFASFFGPGITAEIGIDDNGLFEVRLTSDT 826
           +AK L LSDFEKRQAKFASFFGPGITAE+G  +N L+EVRLTS+T
Sbjct: 244 EAKALTLSDFEKRQAKFASFFGPGITAEVGKGENDLYEVRLTSNT 288


>ref|XP_004141498.1| PREDICTED: thylakoid membrane protein slr0575-like [Cucumis
           sativus]
          Length = 294

 Score =  303 bits (775), Expect = 4e-80
 Identities = 159/225 (70%), Positives = 175/225 (77%)
 Frame = +2

Query: 152 KPVQLKLIVIAKAADSTQAPXXXXXXTTGKAVVEDTEFTLAKXXXXXXXXXXXXXXXXXX 331
           KP +L      +AADSTQ        + GKAVV D EF+LAK                  
Sbjct: 66  KPHRLAFSFSTRAADSTQPSAVSA--SPGKAVVTDDEFSLAKVSFGVIGLGVGVSLLSYG 123

Query: 332 XXAYFNILPGSEWSAIMLTYGFPLAVIGMALKYAELKPVPCITYSDAAMLREKCATPILK 511
             AYFNILPGSEWSAIMLTYGFPLA+IGMALKYAELKPVPC+TY DA  LRE CATPILK
Sbjct: 124 FGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILK 183

Query: 512 QVRNDVIRFRYGDEQHLEEALKRIFQYGLGGGIPRRSAPMLELIREEVTEDGRYSLVLVF 691
           QVR+DVIRFRYGDEQHL+EALKRIFQYGL GGIPRRSAP+L+ IREEVTEDG+Y LVLVF
Sbjct: 184 QVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVF 243

Query: 692 KAKDLQLSDFEKRQAKFASFFGPGITAEIGIDDNGLFEVRLTSDT 826
           +AK L LSDFEKRQAKFASFFGPGITAE+G  +N L+EVRLTS+T
Sbjct: 244 EAKALTLSDFEKRQAKFASFFGPGITAEVGKGENDLYEVRLTSNT 288


>ref|XP_002283351.1| PREDICTED: thylakoid membrane protein slr0575 [Vitis vinifera]
           gi|298204373|emb|CBI16853.3| unnamed protein product
           [Vitis vinifera]
          Length = 281

 Score =  300 bits (767), Expect = 4e-79
 Identities = 157/227 (69%), Positives = 178/227 (78%), Gaps = 2/227 (0%)
 Frame = +2

Query: 155 PVQLK-LIVIAKAADSTQAPXXXXXXT-TGKAVVEDTEFTLAKXXXXXXXXXXXXXXXXX 328
           P  LK L+++ +AA+ST  P      + + K +V D EF+LAK                 
Sbjct: 54  PRSLKPLLLLTRAAESTPPPSAASPSSLSDKTIVVDEEFSLAKVSFGVIGLGLGITLLSY 113

Query: 329 XXXAYFNILPGSEWSAIMLTYGFPLAVIGMALKYAELKPVPCITYSDAAMLREKCATPIL 508
              AYFNILPGSEWSAIMLTYGFPLA+IGMALKYAELKPVPC+TYSDA  LRE  ATPIL
Sbjct: 114 GFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYSDAQKLRETSATPIL 173

Query: 509 KQVRNDVIRFRYGDEQHLEEALKRIFQYGLGGGIPRRSAPMLELIREEVTEDGRYSLVLV 688
           KQVRNDVIR+RYGDEQHLEEALKRIFQYGLGGGIPRRSAP L++IREEVTEDG+Y LVLV
Sbjct: 174 KQVRNDVIRYRYGDEQHLEEALKRIFQYGLGGGIPRRSAPTLQMIREEVTEDGKYCLVLV 233

Query: 689 FKAKDLQLSDFEKRQAKFASFFGPGITAEIGIDDNGLFEVRLTSDTT 829
           F+AK LQLSDFEKRQAKFASFFGPGITAE+   +N L+EVRL S++T
Sbjct: 234 FEAKALQLSDFEKRQAKFASFFGPGITAEVAKGENDLYEVRLISNST 280


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