BLASTX nr result

ID: Coptis25_contig00009036 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009036
         (1005 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279909.2| PREDICTED: conserved oligomeric Golgi comple...   531   e-149
ref|XP_002516094.1| Conserved oligomeric Golgi complex component...   530   e-148
ref|XP_002873542.1| hypothetical protein ARALYDRAFT_488040 [Arab...   527   e-147
ref|XP_002308543.1| predicted protein [Populus trichocarpa] gi|2...   527   e-147
dbj|BAK61816.1| conserved oligomeric Golgi complex component [Ci...   526   e-147

>ref|XP_002279909.2| PREDICTED: conserved oligomeric Golgi complex subunit 8-like [Vitis
           vinifera] gi|296081667|emb|CBI20672.3| unnamed protein
           product [Vitis vinifera]
          Length = 571

 Score =  531 bits (1369), Expect = e-149
 Identities = 269/322 (83%), Positives = 290/322 (90%)
 Frame = -1

Query: 966 MNSPNQESDSTTTNVLPLASMSQQPYVSELLSFTLDRLHKEPELLRVDAERITRQMQEVA 787
           M+S   E  S    +LPLAS+SQQPYVSELLSFTLDRLHKEPELLRVDAERI RQMQEVA
Sbjct: 1   MDSDAAEDSSPMATLLPLASVSQQPYVSELLSFTLDRLHKEPELLRVDAERIRRQMQEVA 60

Query: 786 VGNYRAFISASEALVSIREEVSSVDKHLDSMISEIPKLTSGCTEFIDSAQQILEKRKLNQ 607
           V NYRAFISA++AL++IREEVSSVDKHL+S+I+EIPKLTSGCTEFI+SA+QILE+RK+NQ
Sbjct: 61  VNNYRAFISAADALLAIREEVSSVDKHLESLINEIPKLTSGCTEFIESAEQILEERKMNQ 120

Query: 606 TLLANHSTLLDLLEIPQLMDTCVRNGNYDEALDLEAFVGKLSTMHPKLPVIQALAAEVRQ 427
           TLLANHSTLLDLLEIPQLMDTCVRNGNYDEALDLEAFV KLSTMHPKLPVIQALAAEVRQ
Sbjct: 121 TLLANHSTLLDLLEIPQLMDTCVRNGNYDEALDLEAFVCKLSTMHPKLPVIQALAAEVRQ 180

Query: 426 MTXXXXXXXXXXXXSNIQLPECLRIIGYIRRIGVFGESEMRLQFLRCREAWLVGLLDDLD 247
            T            SNI LP+CLRIIGY+RRIGVF E EMRLQFLRCREAWL G+LDDLD
Sbjct: 181 TTQSLLHQLLQKLRSNILLPDCLRIIGYLRRIGVFSEFEMRLQFLRCREAWLTGILDDLD 240

Query: 246 QRNAYDYLKGMVNCYRMHLFDVVSQYRAIYADDTSRSEENYDGGLLFSWAMHQITSHLKT 67
           Q+NAYDYLKGMVNC RMHLFDVV+QYRAI+ADDTS SEENYDGGLLFSWAMHQITSHL+T
Sbjct: 241 QKNAYDYLKGMVNCQRMHLFDVVNQYRAIFADDTSGSEENYDGGLLFSWAMHQITSHLRT 300

Query: 66  LKVMLPKITEGGSLSNILDQCM 1
           LK MLPKITEGGSLSNILDQCM
Sbjct: 301 LKAMLPKITEGGSLSNILDQCM 322


>ref|XP_002516094.1| Conserved oligomeric Golgi complex component, putative [Ricinus
           communis] gi|223544580|gb|EEF46096.1| Conserved
           oligomeric Golgi complex component, putative [Ricinus
           communis]
          Length = 574

 Score =  530 bits (1364), Expect = e-148
 Identities = 263/322 (81%), Positives = 291/322 (90%)
 Frame = -1

Query: 966 MNSPNQESDSTTTNVLPLASMSQQPYVSELLSFTLDRLHKEPELLRVDAERITRQMQEVA 787
           M   N +  S   N++PLAS+SQQPYVSELLSFTLDRLHKEPELLRVDAERI RQMQEVA
Sbjct: 1   MEVENGDDTSAMANLIPLASVSQQPYVSELLSFTLDRLHKEPELLRVDAERIQRQMQEVA 60

Query: 786 VGNYRAFISASEALVSIREEVSSVDKHLDSMISEIPKLTSGCTEFIDSAQQILEKRKLNQ 607
           VGNYRAFI+A++AL++IR+EVSS+D HL+S+I+EIPKLTSGCTEFI+SA+QILE+RK+NQ
Sbjct: 61  VGNYRAFIAAADALLAIRQEVSSIDNHLESLITEIPKLTSGCTEFIESAEQILEERKMNQ 120

Query: 606 TLLANHSTLLDLLEIPQLMDTCVRNGNYDEALDLEAFVGKLSTMHPKLPVIQALAAEVRQ 427
           TLLANHSTLLDLLEIPQLMDTCVRNGNYDEALDLEAFV KL TMHPKLPVIQALAAEVRQ
Sbjct: 121 TLLANHSTLLDLLEIPQLMDTCVRNGNYDEALDLEAFVCKLLTMHPKLPVIQALAAEVRQ 180

Query: 426 MTXXXXXXXXXXXXSNIQLPECLRIIGYIRRIGVFGESEMRLQFLRCREAWLVGLLDDLD 247
            T            SNIQLPECLRIIGY+RRIGVF E EMRLQFLRCREAWL G+L+DLD
Sbjct: 181 TTQSLLSQLLQKLRSNIQLPECLRIIGYLRRIGVFSEYEMRLQFLRCREAWLTGILEDLD 240

Query: 246 QRNAYDYLKGMVNCYRMHLFDVVSQYRAIYADDTSRSEENYDGGLLFSWAMHQITSHLKT 67
           QRN Y+YLKGM+NC+RMHLFDVV+QYRAI+ADDTS SEENYDGGLLFSWAMHQIT+HLKT
Sbjct: 241 QRNVYEYLKGMINCHRMHLFDVVNQYRAIFADDTSGSEENYDGGLLFSWAMHQITAHLKT 300

Query: 66  LKVMLPKITEGGSLSNILDQCM 1
           LK+MLPKITEGGSLSNILDQCM
Sbjct: 301 LKIMLPKITEGGSLSNILDQCM 322


>ref|XP_002873542.1| hypothetical protein ARALYDRAFT_488040 [Arabidopsis lyrata subsp.
           lyrata] gi|297319379|gb|EFH49801.1| hypothetical protein
           ARALYDRAFT_488040 [Arabidopsis lyrata subsp. lyrata]
          Length = 568

 Score =  527 bits (1357), Expect = e-147
 Identities = 260/311 (83%), Positives = 288/311 (92%)
 Frame = -1

Query: 933 TTNVLPLASMSQQPYVSELLSFTLDRLHKEPELLRVDAERITRQMQEVAVGNYRAFISAS 754
           T ++L LAS +QQPYVSELLSFTLDRLHKEPELLRVDAERI RQMQEVAVGNYRAFI+A+
Sbjct: 14  TASLLSLASATQQPYVSELLSFTLDRLHKEPELLRVDAERIQRQMQEVAVGNYRAFITAA 73

Query: 753 EALVSIREEVSSVDKHLDSMISEIPKLTSGCTEFIDSAQQILEKRKLNQTLLANHSTLLD 574
           +AL++IR+EVSS+DKHL+S+I E+PKLTSGCTEFIDSA+ ILEKRK+NQ+LLANHSTLLD
Sbjct: 74  DALLAIRQEVSSIDKHLESLIGEVPKLTSGCTEFIDSAENILEKRKMNQSLLANHSTLLD 133

Query: 573 LLEIPQLMDTCVRNGNYDEALDLEAFVGKLSTMHPKLPVIQALAAEVRQMTXXXXXXXXX 394
           LLEIPQLMDTCVRNGN+DEALDLEAFV KL+TMHPKLPVIQALAAEVRQ T         
Sbjct: 134 LLEIPQLMDTCVRNGNFDEALDLEAFVSKLATMHPKLPVIQALAAEVRQTTQSLLSQLLQ 193

Query: 393 XXXSNIQLPECLRIIGYIRRIGVFGESEMRLQFLRCREAWLVGLLDDLDQRNAYDYLKGM 214
              SNIQLPECLRIIGY+RRIGVFGE EMRLQFLRCREAWL G+L+DLDQ+NAY+YLKGM
Sbjct: 194 KLRSNIQLPECLRIIGYLRRIGVFGEYEMRLQFLRCREAWLTGILEDLDQKNAYEYLKGM 253

Query: 213 VNCYRMHLFDVVSQYRAIYADDTSRSEENYDGGLLFSWAMHQITSHLKTLKVMLPKITEG 34
           +NC+RMHLFDVV+QYRAI+ADDTS SEENYDGGLLFSWAMHQITSHLKTLK+MLPKITEG
Sbjct: 254 INCHRMHLFDVVNQYRAIFADDTSGSEENYDGGLLFSWAMHQITSHLKTLKIMLPKITEG 313

Query: 33  GSLSNILDQCM 1
           GSLSNILDQCM
Sbjct: 314 GSLSNILDQCM 324


>ref|XP_002308543.1| predicted protein [Populus trichocarpa] gi|222854519|gb|EEE92066.1|
           predicted protein [Populus trichocarpa]
          Length = 575

 Score =  527 bits (1357), Expect = e-147
 Identities = 262/317 (82%), Positives = 290/317 (91%)
 Frame = -1

Query: 951 QESDSTTTNVLPLASMSQQPYVSELLSFTLDRLHKEPELLRVDAERITRQMQEVAVGNYR 772
           Q+  S  T++LPLAS+SQQPYVSELLSFTLDRLHKEPELLRVDAERI RQMQEVAV NYR
Sbjct: 8   QDMSSAVTSLLPLASVSQQPYVSELLSFTLDRLHKEPELLRVDAERIQRQMQEVAVVNYR 67

Query: 771 AFISASEALVSIREEVSSVDKHLDSMISEIPKLTSGCTEFIDSAQQILEKRKLNQTLLAN 592
           AFI+A++AL++IR++VSS+D HL+S+I+EIPKLTSGCTEFI+SA++ILEKRK+NQTLLAN
Sbjct: 68  AFIAAADALLAIRQQVSSIDNHLESLITEIPKLTSGCTEFIESAEEILEKRKMNQTLLAN 127

Query: 591 HSTLLDLLEIPQLMDTCVRNGNYDEALDLEAFVGKLSTMHPKLPVIQALAAEVRQMTXXX 412
           HSTLLDLLEIPQLMDTCVRNGNYDEALDLEAFV KLSTMHPKLPVIQALAAEVRQ T   
Sbjct: 128 HSTLLDLLEIPQLMDTCVRNGNYDEALDLEAFVCKLSTMHPKLPVIQALAAEVRQTTQSL 187

Query: 411 XXXXXXXXXSNIQLPECLRIIGYIRRIGVFGESEMRLQFLRCREAWLVGLLDDLDQRNAY 232
                    SNIQLPECLRIIGY+RRIGVF E EMRLQFLRCREAWL G+L+DLDQRNAY
Sbjct: 188 LSQLLQKLRSNIQLPECLRIIGYLRRIGVFSEYEMRLQFLRCREAWLTGILEDLDQRNAY 247

Query: 231 DYLKGMVNCYRMHLFDVVSQYRAIYADDTSRSEENYDGGLLFSWAMHQITSHLKTLKVML 52
           +YLKGM+NC+R HLFDVV+QYRAI+ADDTS SEENYDGGLLFSWAMHQITSHLKTLK+ML
Sbjct: 248 EYLKGMINCHRTHLFDVVNQYRAIFADDTSGSEENYDGGLLFSWAMHQITSHLKTLKIML 307

Query: 51  PKITEGGSLSNILDQCM 1
           PKITEGGSLSNILD CM
Sbjct: 308 PKITEGGSLSNILDSCM 324


>dbj|BAK61816.1| conserved oligomeric Golgi complex component [Citrus unshiu]
          Length = 568

 Score =  526 bits (1354), Expect = e-147
 Identities = 260/315 (82%), Positives = 291/315 (92%)
 Frame = -1

Query: 945 SDSTTTNVLPLASMSQQPYVSELLSFTLDRLHKEPELLRVDAERITRQMQEVAVGNYRAF 766
           + S+  ++LPLAS+SQQPYVSELLSFTLDRLHKEPELLRVDAERI RQMQEVAVGNYRAF
Sbjct: 10  TSSSVASLLPLASLSQQPYVSELLSFTLDRLHKEPELLRVDAERIQRQMQEVAVGNYRAF 69

Query: 765 ISASEALVSIREEVSSVDKHLDSMISEIPKLTSGCTEFIDSAQQILEKRKLNQTLLANHS 586
           I+A++AL++IREEVSS+DKHLDS+I+EIPKLTSGCTEFI+SA++ILEKRK+NQ LLANHS
Sbjct: 70  IAAADALLAIREEVSSIDKHLDSLITEIPKLTSGCTEFIESAEEILEKRKMNQMLLANHS 129

Query: 585 TLLDLLEIPQLMDTCVRNGNYDEALDLEAFVGKLSTMHPKLPVIQALAAEVRQMTXXXXX 406
           TLLDLLEIPQLMDTCVRNGNYDEALDLEA+V KLST+HPKLP+IQALAAEV+Q T     
Sbjct: 130 TLLDLLEIPQLMDTCVRNGNYDEALDLEAYVCKLSTLHPKLPIIQALAAEVKQTTQSLLS 189

Query: 405 XXXXXXXSNIQLPECLRIIGYIRRIGVFGESEMRLQFLRCREAWLVGLLDDLDQRNAYDY 226
                  SNIQLPECLRIIGY+RRIGVF E EMRLQFLRCREAWL G+L+DLDQ+NAY+Y
Sbjct: 190 QLLQKLRSNIQLPECLRIIGYLRRIGVFSEYEMRLQFLRCREAWLTGILEDLDQKNAYEY 249

Query: 225 LKGMVNCYRMHLFDVVSQYRAIYADDTSRSEENYDGGLLFSWAMHQITSHLKTLKVMLPK 46
           LKGM+NC+RMHLFDVV+QYRAI+ADDTS SEENYDGGLLFSWAMHQIT+HLKTLKVMLPK
Sbjct: 250 LKGMINCHRMHLFDVVNQYRAIFADDTSGSEENYDGGLLFSWAMHQITAHLKTLKVMLPK 309

Query: 45  ITEGGSLSNILDQCM 1
           ITEG SLSNILDQCM
Sbjct: 310 ITEGVSLSNILDQCM 324


Top