BLASTX nr result
ID: Coptis25_contig00009008
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00009008
(2202 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002272057.2| PREDICTED: uncharacterized protein LOC100266... 243 1e-61
emb|CBI29499.3| unnamed protein product [Vitis vinifera] 243 1e-61
ref|XP_002304290.1| predicted protein [Populus trichocarpa] gi|2... 232 3e-58
ref|XP_002521236.1| conserved hypothetical protein [Ricinus comm... 225 4e-56
ref|XP_003630908.1| CigA protein [Medicago truncatula] gi|355524... 223 1e-55
>ref|XP_002272057.2| PREDICTED: uncharacterized protein LOC100266043 [Vitis vinifera]
Length = 482
Score = 243 bits (621), Expect = 1e-61
Identities = 119/176 (67%), Positives = 146/176 (82%)
Frame = +1
Query: 583 LMDFSPLVSSSLVKIIDFRVFVMLWCGIETDLACFDKSEVKSTLFDSLKQCGSLLSGKDG 762
++D S LVS S+++ IDFR F+ LWCG+ D CF++S +S+L DSLKQCGS LSG DG
Sbjct: 145 IIDLSSLVSISVIQAIDFRDFISLWCGVNVDFDCFNESNDQSSLLDSLKQCGSRLSGLDG 204
Query: 763 NVEGCLYAVGEDCRTTVWTYQQDSEDGMLDSFQPDEQRRKKKKASYTRKRRDVYKALGPG 942
NV+ C+YA+ EDCRTTVWTYQQ+ +D +LDSFQPDEQ +KKKK SY RKRRDVYK LGPG
Sbjct: 205 NVDKCIYALDEDCRTTVWTYQQN-DDEVLDSFQPDEQLKKKKKISYIRKRRDVYKTLGPG 263
Query: 943 SEAGSATILAFGSLFTSPYKGSELYIDIHDAPRDHRINSLFGKLDALTFVPEIITS 1110
S+A SAT+LAFGSLFT+PYKGSELYIDI++APRD RI+SL K++ L FVP +ITS
Sbjct: 264 SKAESATVLAFGSLFTAPYKGSELYIDINEAPRDQRISSLIQKIEFLPFVP-LITS 318
Score = 167 bits (424), Expect = 8e-39
Identities = 83/125 (66%), Positives = 100/125 (80%), Gaps = 5/125 (4%)
Frame = +3
Query: 138 SLFPNSLNSPIPQFPQCK-----GEKFLWFAPHSGFSNQLSELKNAILMASILNRTLIVP 302
S PNSL PI + QC G++FLW+APHSGFSNQ+SE KNAILMA+ILNRTL+VP
Sbjct: 40 SHIPNSL-LPISRTSQCTPQNLPGQRFLWYAPHSGFSNQVSEFKNAILMAAILNRTLVVP 98
Query: 303 PVMDHHAVVLGSCPKFRVLDPMELRMKVWGHVIELIQSHRYVSMADIVDFSPQVSSSLIK 482
P++DHHAV LGSCPKFRVL P E+R+ VW HVI+L++S RYVSMADI+D S VS S+I+
Sbjct: 99 PILDHHAVALGSCPKFRVLGPGEIRLSVWNHVIDLLRSRRYVSMADIIDLSSLVSISVIQ 158
Query: 483 IIDFR 497
IDFR
Sbjct: 159 AIDFR 163
>emb|CBI29499.3| unnamed protein product [Vitis vinifera]
Length = 494
Score = 243 bits (621), Expect = 1e-61
Identities = 119/176 (67%), Positives = 146/176 (82%)
Frame = +1
Query: 583 LMDFSPLVSSSLVKIIDFRVFVMLWCGIETDLACFDKSEVKSTLFDSLKQCGSLLSGKDG 762
++D S LVS S+++ IDFR F+ LWCG+ D CF++S +S+L DSLKQCGS LSG DG
Sbjct: 145 IIDLSSLVSISVIQAIDFRDFISLWCGVNVDFDCFNESNDQSSLLDSLKQCGSRLSGLDG 204
Query: 763 NVEGCLYAVGEDCRTTVWTYQQDSEDGMLDSFQPDEQRRKKKKASYTRKRRDVYKALGPG 942
NV+ C+YA+ EDCRTTVWTYQQ+ +D +LDSFQPDEQ +KKKK SY RKRRDVYK LGPG
Sbjct: 205 NVDKCIYALDEDCRTTVWTYQQN-DDEVLDSFQPDEQLKKKKKISYIRKRRDVYKTLGPG 263
Query: 943 SEAGSATILAFGSLFTSPYKGSELYIDIHDAPRDHRINSLFGKLDALTFVPEIITS 1110
S+A SAT+LAFGSLFT+PYKGSELYIDI++APRD RI+SL K++ L FVP +ITS
Sbjct: 264 SKAESATVLAFGSLFTAPYKGSELYIDINEAPRDQRISSLIQKIEFLPFVP-LITS 318
Score = 167 bits (424), Expect = 8e-39
Identities = 83/125 (66%), Positives = 100/125 (80%), Gaps = 5/125 (4%)
Frame = +3
Query: 138 SLFPNSLNSPIPQFPQCK-----GEKFLWFAPHSGFSNQLSELKNAILMASILNRTLIVP 302
S PNSL PI + QC G++FLW+APHSGFSNQ+SE KNAILMA+ILNRTL+VP
Sbjct: 40 SHIPNSL-LPISRTSQCTPQNLPGQRFLWYAPHSGFSNQVSEFKNAILMAAILNRTLVVP 98
Query: 303 PVMDHHAVVLGSCPKFRVLDPMELRMKVWGHVIELIQSHRYVSMADIVDFSPQVSSSLIK 482
P++DHHAV LGSCPKFRVL P E+R+ VW HVI+L++S RYVSMADI+D S VS S+I+
Sbjct: 99 PILDHHAVALGSCPKFRVLGPGEIRLSVWNHVIDLLRSRRYVSMADIIDLSSLVSISVIQ 158
Query: 483 IIDFR 497
IDFR
Sbjct: 159 AIDFR 163
>ref|XP_002304290.1| predicted protein [Populus trichocarpa] gi|222841722|gb|EEE79269.1|
predicted protein [Populus trichocarpa]
Length = 405
Score = 232 bits (592), Expect = 3e-58
Identities = 112/176 (63%), Positives = 136/176 (77%)
Frame = +1
Query: 583 LMDFSPLVSSSLVKIIDFRVFVMLWCGIETDLACFDKSEVKSTLFDSLKQCGSLLSGKDG 762
++D S LV SS ++ IDFRVF WC ++ D C + +S+LFDSL CGS+LSG DG
Sbjct: 59 IIDISSLVPSS-IQAIDFRVFASQWCNVKMDFTCSNDLNAQSSLFDSLNLCGSILSGIDG 117
Query: 763 NVEGCLYAVGEDCRTTVWTYQQDSEDGMLDSFQPDEQRRKKKKASYTRKRRDVYKALGPG 942
NV+ CLYAV EDCRTTVWTY+ ED + DSFQPDEQ +KKKK SY R+R+DVYK+LGPG
Sbjct: 118 NVDKCLYAVDEDCRTTVWTYKNGDEDRVFDSFQPDEQLKKKKKISYVRRRQDVYKSLGPG 177
Query: 943 SEAGSATILAFGSLFTSPYKGSELYIDIHDAPRDHRINSLFGKLDALTFVPEIITS 1110
SEAGSAT+LAFGSLFT+PYKGSEL+IDIH+A RD RI SL + L FVPEI+ +
Sbjct: 178 SEAGSATVLAFGSLFTAPYKGSELHIDIHEARRDQRIQSLIDNSEFLPFVPEILNA 233
Score = 112 bits (281), Expect = 3e-22
Identities = 55/78 (70%), Positives = 65/78 (83%)
Frame = +3
Query: 267 MASILNRTLIVPPVMDHHAVVLGSCPKFRVLDPMELRMKVWGHVIELIQSHRYVSMADIV 446
MA ILNRTLIVPPV+DHHAV LGSCPKFRVL P E+R+ VW HV++L+++ RYVSMADI+
Sbjct: 1 MAGILNRTLIVPPVLDHHAVALGSCPKFRVLGPKEIRVSVWDHVLDLVKTGRYVSMADII 60
Query: 447 DFSPQVSSSLIKIIDFRV 500
D S V SS I+ IDFRV
Sbjct: 61 DISSLVPSS-IQAIDFRV 77
>ref|XP_002521236.1| conserved hypothetical protein [Ricinus communis]
gi|223539504|gb|EEF41092.1| conserved hypothetical
protein [Ricinus communis]
Length = 506
Score = 225 bits (573), Expect = 4e-56
Identities = 109/176 (61%), Positives = 133/176 (75%)
Frame = +1
Query: 583 LMDFSPLVSSSLVKIIDFRVFVMLWCGIETDLACFDKSEVKSTLFDSLKQCGSLLSGKDG 762
++D S LV SS ++ IDFRVF LWCG+ D C + +S+LFDSL QCGS+LSG G
Sbjct: 159 IIDISSLVPSS-IRAIDFRVFASLWCGVNKDFICTNNLNAESSLFDSLGQCGSVLSGFTG 217
Query: 763 NVEGCLYAVGEDCRTTVWTYQQDSEDGMLDSFQPDEQRRKKKKASYTRKRRDVYKALGPG 942
N+ CLYAV EDCRTTVWTY+ +DG+LDSFQPDEQ +KKK SY R+ +DVYK LG G
Sbjct: 218 NIGKCLYAVVEDCRTTVWTYKNGEKDGVLDSFQPDEQLKKKKNISYIRRHQDVYKVLGTG 277
Query: 943 SEAGSATILAFGSLFTSPYKGSELYIDIHDAPRDHRINSLFGKLDALTFVPEIITS 1110
SE+ SA++LAFGSLFT+PYKGSELYIDIH+A RD RI SL K L FVPE++ +
Sbjct: 278 SESESASVLAFGSLFTAPYKGSELYIDIHEAQRDQRIQSLIKKSQFLPFVPELLNA 333
Score = 167 bits (422), Expect = 1e-38
Identities = 84/131 (64%), Positives = 101/131 (77%), Gaps = 4/131 (3%)
Frame = +3
Query: 120 YTQISKSLFPNSLNSPIPQFPQCK----GEKFLWFAPHSGFSNQLSELKNAILMASILNR 287
YT+ SK + N+L+S I Q + + GEKFLW+APHSGFSNQLSE KNAILMA ILNR
Sbjct: 48 YTKTSKPILQNTLDSQISQCSRFQSLTGGEKFLWYAPHSGFSNQLSEFKNAILMAGILNR 107
Query: 288 TLIVPPVMDHHAVVLGSCPKFRVLDPMELRMKVWGHVIELIQSHRYVSMADIVDFSPQVS 467
TLIVPP++DHHAV LGSCPK RVL P ++R+ VW H IEL+++ RYVSM DI+D S V
Sbjct: 108 TLIVPPILDHHAVALGSCPKLRVLGPKDIRISVWNHAIELVKTGRYVSMVDIIDISSLVP 167
Query: 468 SSLIKIIDFRV 500
SS I+ IDFRV
Sbjct: 168 SS-IRAIDFRV 177
>ref|XP_003630908.1| CigA protein [Medicago truncatula] gi|355524930|gb|AET05384.1| CigA
protein [Medicago truncatula]
Length = 486
Score = 223 bits (569), Expect = 1e-55
Identities = 106/177 (59%), Positives = 139/177 (78%), Gaps = 1/177 (0%)
Frame = +1
Query: 583 LMDFSPLVSSSLVKIIDFRVFVMLWCGIETDLACFDKSEVKSTLFDSLKQCGSLLSGKDG 762
++D S LVSSSLV++ID R FV +WCGI DLAC + + +S++ +SLKQCGSLLSG G
Sbjct: 143 IIDISSLVSSSLVRVIDLRDFVSIWCGISLDLACNNDPKSQSSVSESLKQCGSLLSGFHG 202
Query: 763 NVEGCLYAVGEDCRTTVWTYQQDS-EDGMLDSFQPDEQRRKKKKASYTRKRRDVYKALGP 939
N+ C+YA+ EDCRTTVWTY D EDGMLDSFQPDEQ +++KK SY R+RRDV++ LGP
Sbjct: 203 NIAKCIYAINEDCRTTVWTYHVDGHEDGMLDSFQPDEQLKQRKKISYVRRRRDVFRTLGP 262
Query: 940 GSEAGSATILAFGSLFTSPYKGSELYIDIHDAPRDHRINSLFGKLDALTFVPEIITS 1110
GS+ SA++LAFGSLF++PYKGSE YIDIH++ +D R SL K+ L +VPE++ +
Sbjct: 263 GSKVESASMLAFGSLFSAPYKGSESYIDIHESHQDQRFLSLMEKIKFLPYVPEVMNA 319
Score = 153 bits (387), Expect = 2e-34
Identities = 67/101 (66%), Positives = 87/101 (86%)
Frame = +3
Query: 195 EKFLWFAPHSGFSNQLSELKNAILMASILNRTLIVPPVMDHHAVVLGSCPKFRVLDPMEL 374
EKF+W+APHSGFSNQLSE K+A+L+A ILNRTL+VPP++DHHAV LGSCPKFRV++P +
Sbjct: 61 EKFMWYAPHSGFSNQLSEFKHAVLIAGILNRTLVVPPILDHHAVALGSCPKFRVVEPNHI 120
Query: 375 RMKVWGHVIELIQSHRYVSMADIVDFSPQVSSSLIKIIDFR 497
R VW HVI+L++ RYVS+A+I+D S VSSSL+++ID R
Sbjct: 121 RFSVWDHVIQLLRGGRYVSIAEIIDISSLVSSSLVRVIDLR 161