BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009003
         (2807 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16215.3| unnamed protein product [Vitis vinifera]              454   e-125
ref|XP_002281631.2| PREDICTED: uncharacterized protein LOC100241...   449   e-123
ref|XP_002314208.1| predicted protein [Populus trichocarpa] gi|2...   374   e-101
ref|XP_002864661.1| hypothetical protein ARALYDRAFT_332265 [Arab...   370   1e-99
ref|NP_200806.2| ribonuclease P subunit Rpp30 [Arabidopsis thali...   369   2e-99

>emb|CBI16215.3| unnamed protein product [Vitis vinifera]
          Length = 667

 Score =  454 bits (1167), Expect = e-125
 Identities = 304/703 (43%), Positives = 399/703 (56%), Gaps = 41/703 (5%)
 Frame = -1

Query: 2762 MGFFDLNVPYNQEEERSLKLIPATPEQTKAKTNRLKIVVKLMELGYSGIAYTRSIKSGTV 2583
            MGFFDLN+PY+                   K++R+K+VVK MELGYSG+AY R IK   V
Sbjct: 1    MGFFDLNIPYDGTTAAG------------DKSSRIKVVVKAMELGYSGVAYNRKIKG--V 46

Query: 2582 LSDSDFCTIPLFPLSSLLKITPSLSSNVKFHKQLLGVPETSPFRQYTRLTINVDSLIQCS 2403
            +SDSD C+IP   LSSLLK+ PSLSS+V+FH+ LLGVP +SPFRQYTRLT+ VDS  Q S
Sbjct: 47   MSDSDSCSIPPLSLSSLLKLAPSLSSSVRFHRSLLGVPLSSPFRQYTRLTVAVDSSPQAS 106

Query: 2402 SLNSSNPVLKTYDLVAARPLNQPTFDHVCKYAEVDIIAIDFSQWVPFRIKYPILQAVIKR 2223
            +LNS NPVLK+YDLVA RPLNQ  FD  C+ +EVD+IAIDFS+ +PFR+K P+++A IKR
Sbjct: 107  ALNSGNPVLKSYDLVAVRPLNQNAFDQACQVSEVDLIAIDFSEKLPFRLKLPMVKAAIKR 166

Query: 2222 GIYFEITYSSLLSDVQARKQMVYNTKLLMQWTRGKNLIFSSAAPSVCEIRGPYDVANLSC 2043
            G+YFEITYS+L+SDVQ+RKQ++ N KLL+ WTRG NLIFSSAAPSV E+RGPYDVANLS 
Sbjct: 167  GVYFEITYSNLISDVQSRKQVISNAKLLVDWTRGNNLIFSSAAPSVNELRGPYDVANLSS 226

Query: 2042 LLGLSMERAKAAIFKNSRSLLLNTVRKKQYFKNAIRIERISPIKPVDSKEAWFCDGNGWD 1863
            LLGLSMERAKAAI KN RSL+ N +RKKQ++K AIR+E I P    DS E W  +G  WD
Sbjct: 227  LLGLSMERAKAAISKNCRSLIANALRKKQFYKEAIRVELI-PSSEFDSNEPWSGNGLKWD 285

Query: 1862 HISSGEGDLLLDDIAKSFASTVKVTKTSKASDVAPVFDEISSHDIHLKDLCPGSGGELHQ 1683
             ISSGEGDLLLDD+AKSF++  KV+KT KA D A + D +  H + LKDL  G+   L Q
Sbjct: 286  PISSGEGDLLLDDMAKSFSAAGKVSKTVKAIDFASIVDNMPPHGLQLKDLLSGTKSVL-Q 344

Query: 1682 PNVSATKELKDSHEV-------------FKQLNELELVPIAGAMLLASTPLQHQSSGCQD 1542
            P       +K+S  V              +Q + L+L P        +TP + Q SG +D
Sbjct: 345  P----VDNIKNSMSVDGKIGAPVPTNGGSEQPDMLKLFPETEQTSSYNTPSKCQISGHED 400

Query: 1541 -----FPN-TPPVFTDDMEIEILANGLEKDKDSCCTV----PITVEFVSHGKVSKDSEHN 1392
                  PN T     D  EI+      E++ +    +    P+  E       S++    
Sbjct: 401  SKKSFSPNDTSKADIDSEEIKTHTTITEEEPNISNGLVDFSPVRTEI--DNLQSEECTAG 458

Query: 1391 CAENHVSREDAITLVTPMEDIE-SSVQHVDPRGSSDLDMVSSSFIDISTIESDVRAAMNT 1215
               N V  +D +TL T + DIE  +V + D  G            ++ T   DV  ++  
Sbjct: 459  SEANVVLPDDNLTLCTVLMDIECDAVCNADADGK----------FEVPTQTRDVNLSV-- 506

Query: 1214 LEHSTPANEIAPYSSNEDDKRLNGVDVVLDTGGVRIMEVLGEDDKRETTRLILAGCDMFT 1035
                           NE+ +   G DVVL    V + EVL + D +    L LA  ++  
Sbjct: 507  -------------LQNEESRNAKGFDVVLGARSVTVDEVLVDTDMKNEASLSLASNNVLL 553

Query: 1034 DSGYSNREKNEPPKYSAVPHD--------DKMLGVSFSE-------NQAYVNSAKFLQHE 900
                S RE  EP   S +  D        D++ G + S        ++  V + K  Q +
Sbjct: 554  HDNSSEREFREPVDDSVLLSDGTPSVECYDELKGSNDSSVANHELMDEMIVEAQK--QAD 611

Query: 899  DTSVESDDQKQFKSGIGRSMRRIFPR--GFQFALKRFLHPMLF 777
            D+  E     +  SG  ++ +R  PR     F  KR + P+LF
Sbjct: 612  DSETEYPSINESISGKAKAKQRT-PRRAALLFPFKRLVSPVLF 653


>ref|XP_002281631.2| PREDICTED: uncharacterized protein LOC100241609 [Vitis vinifera]
          Length = 694

 Score =  449 bits (1154), Expect = e-123
 Identities = 285/621 (45%), Positives = 366/621 (58%), Gaps = 24/621 (3%)
 Frame = -1

Query: 2762 MGFFDLNVPYNQEEERSLKLIPATPEQTKAKTNRLKIVVKLMELGYSGIAYTRSIKSGTV 2583
            MGFFDLN+PY+                   K++R+K+VVK MELGYSG+AY R IK   V
Sbjct: 1    MGFFDLNIPYDGTTAAG------------DKSSRIKVVVKAMELGYSGVAYNRKIKG--V 46

Query: 2582 LSDSDFCTIPLFPLSSLLKITPSLSSNVKFHKQLLGVPETSPFRQYTRLTINVDSLIQCS 2403
            +SDSD C+IP   LSSLLK+ PSLSS+V+FH+ LLGVP +SPFRQYTRLT+ VDS  Q S
Sbjct: 47   MSDSDSCSIPPLSLSSLLKLAPSLSSSVRFHRSLLGVPLSSPFRQYTRLTVAVDSSPQAS 106

Query: 2402 SLNSSNPVLKTYDLVAARPLNQPTFDHVCKYAEVDIIAIDFSQWVPFRIKYPILQAVIKR 2223
            +LNS NPVLK+YDLVA RPLNQ  FD  C+ +EVD+IAIDFS+ +PFR+K P+++A IKR
Sbjct: 107  ALNSGNPVLKSYDLVAVRPLNQNAFDQACQVSEVDLIAIDFSEKLPFRLKLPMVKAAIKR 166

Query: 2222 GIYFEITYSSLLSDVQARKQMVYNTKLLMQWTRGKNLIFSSAAPSVCEIRGPYDVANLSC 2043
            G+YFEITYS+L+SDVQ+RKQ++ N KLL+ WTRG NLIFSSAAPSV E+RGPYDVANLS 
Sbjct: 167  GVYFEITYSNLISDVQSRKQVISNAKLLVDWTRGNNLIFSSAAPSVNELRGPYDVANLSS 226

Query: 2042 LLGLSMERAKAAIFKNSRSLLLNTVRKKQYFKNAIRIERISPIKPVDSKEAWFCDGNGWD 1863
            LLGLSMERAKAAI KN RSL+ N +RKKQ++K AIR+E I P    DS E W  +G  WD
Sbjct: 227  LLGLSMERAKAAISKNCRSLIANALRKKQFYKEAIRVELI-PSSEFDSNEPWSGNGLKWD 285

Query: 1862 HISSGEGDLLLDDIAKSFASTVKVTKTSKASDVAPVFDEISSHDIHLKDLCPGSGGELHQ 1683
             ISSGEGDLLLDD+AKSF++  KV+KT KA D A + D +  H + LKDL  G+   L Q
Sbjct: 286  PISSGEGDLLLDDMAKSFSAAGKVSKTVKAIDFASIVDNMPPHGLQLKDLLSGTKSVL-Q 344

Query: 1682 PNVSATKELKDSHEV-------------FKQLNELELVPIAGAMLLASTPLQHQSSGCQD 1542
            P       +K+S  V              +Q + L+L P        +TP + Q SG +D
Sbjct: 345  P----VDNIKNSMSVDGKIGAPVPTNGGSEQPDMLKLFPETEQTSSYNTPSKCQISGHED 400

Query: 1541 -----FPN-TPPVFTDDMEIEILANGLEKDKDSCCTV----PITVEFVSHGKVSKDSEHN 1392
                  PN T     D  EI+      E++ +    +    P+  E       S++    
Sbjct: 401  SKKSFSPNDTSKADIDSEEIKTHTTITEEEPNISNGLVDFSPVRTEI--DNLQSEECTAG 458

Query: 1391 CAENHVSREDAITLVTPMEDIE-SSVQHVDPRGSSDLDMVSSSFIDISTIESDVRAAMNT 1215
               N V  +D +TL T + DIE  +V + D  G            ++ T   DV  ++  
Sbjct: 459  SEANVVLPDDNLTLCTVLMDIECDAVCNADADGK----------FEVPTQTRDVNLSV-- 506

Query: 1214 LEHSTPANEIAPYSSNEDDKRLNGVDVVLDTGGVRIMEVLGEDDKRETTRLILAGCDMFT 1035
                           NE+ +   G DVVL    V + EVL + D +    L LA  ++  
Sbjct: 507  -------------LQNEESRNAKGFDVVLGARSVTVDEVLVDTDMKNEASLSLASNNVLL 553

Query: 1034 DSGYSNREKNEPPKYSAVPHD 972
                S RE  EP   S +  D
Sbjct: 554  HDNSSEREFREPVDDSVLLSD 574


>ref|XP_002314208.1| predicted protein [Populus trichocarpa] gi|222850616|gb|EEE88163.1|
            predicted protein [Populus trichocarpa]
          Length = 324

 Score =  374 bits (960), Expect = e-101
 Identities = 195/342 (57%), Positives = 246/342 (71%)
 Frame = -1

Query: 2759 GFFDLNVPYNQEEERSLKLIPATPEQTKAKTNRLKIVVKLMELGYSGIAYTRSIKSGTVL 2580
            GFFDLN+P                 Q   KT R+K+VVK MELGYSGIAY RSIK   ++
Sbjct: 1    GFFDLNIP-----------------QDTTKTTRIKLVVKAMELGYSGIAYNRSIKG--IM 41

Query: 2579 SDSDFCTIPLFPLSSLLKITPSLSSNVKFHKQLLGVPETSPFRQYTRLTINVDSLIQCSS 2400
            SD D CTIPL  LSSLL + P+L+ +V  H+ LLG+P +SPFRQYTRLT++VD+  Q   
Sbjct: 42   SDHDRCTIPLLSLSSLLDVAPALAFSVNLHRDLLGIPRSSPFRQYTRLTVSVDTPSQAQV 101

Query: 2399 LNSSNPVLKTYDLVAARPLNQPTFDHVCKYAEVDIIAIDFSQWVPFRIKYPILQAVIKRG 2220
            LNS NPVLKTYD VA +PL+Q  FDH C  +EVD+IAIDFS  +PFR+K P+++A I+RG
Sbjct: 102  LNSGNPVLKTYDFVAVKPLSQTAFDHACLKSEVDMIAIDFSVKLPFRLKLPMVKAAIERG 161

Query: 2219 IYFEITYSSLLSDVQARKQMVYNTKLLMQWTRGKNLIFSSAAPSVCEIRGPYDVANLSCL 2040
            +YFEITYS L++D+Q R+QM+ N KLL+ WTRGKNLIF+SAA SV + RGPYDVAN S L
Sbjct: 162  VYFEITYSDLIADIQVRRQMIPNAKLLVDWTRGKNLIFTSAASSVNDFRGPYDVANFSSL 221

Query: 2039 LGLSMERAKAAIFKNSRSLLLNTVRKKQYFKNAIRIERISPIKPVDSKEAWFCDGNGWDH 1860
             GLSMERAK AI KN RSL+ N +RKK ++K AIRIE IS  +  D+KE    +   WD 
Sbjct: 222  FGLSMERAKTAISKNCRSLIANALRKKHFYKEAIRIEPISSDEISDTKELISVNWLKWDP 281

Query: 1859 ISSGEGDLLLDDIAKSFASTVKVTKTSKASDVAPVFDEISSH 1734
            ISSG GDL L DI KSF++T +V+ T+KA D + V + ++S+
Sbjct: 282  ISSGGGDLQLGDIEKSFSATTRVSTTAKAIDFSEVLNGMASN 323


>ref|XP_002864661.1| hypothetical protein ARALYDRAFT_332265 [Arabidopsis lyrata subsp.
            lyrata] gi|297310496|gb|EFH40920.1| hypothetical protein
            ARALYDRAFT_332265 [Arabidopsis lyrata subsp. lyrata]
          Length = 680

 Score =  370 bits (949), Expect = 1e-99
 Identities = 187/351 (53%), Positives = 249/351 (70%), Gaps = 1/351 (0%)
 Frame = -1

Query: 2762 MGFFDLNVPYNQEEERSLKLIPATPEQTKAKTNRLKIVVKLMELGYSGIAYTRSIKSGTV 2583
            MGFFDL++PYN+      K I         KT RLK+  K MELGY GIA+ RSIK   V
Sbjct: 1    MGFFDLSIPYNEPPRSGGKEIAG------GKTLRLKLATKAMELGYVGIAHNRSIKG--V 52

Query: 2582 LSDSDFCTIPLFPLSSLLKITPSLSSNVKFHKQLLGVPETSPFRQYTRLTINVDSLIQCS 2403
            +SD D+CTIPL  L SL+K+ P L+S+V FH+ LLGVP  +PFRQYTRLT++V+S  QC 
Sbjct: 53   MSDKDYCTIPLLTLGSLIKVAPRLASSVGFHRDLLGVPRATPFRQYTRLTVHVESNAQCQ 112

Query: 2402 SLNSSNPVLKTYDLVAARPLNQPTFDHVCKYAEVDIIAIDFSQWVPFRIKYPILQAVIKR 2223
            SLNS NP+LK+YD++A RP+NQ  FD+ C+ AEVD+I+IDF+  + FR+K+P+++A I+R
Sbjct: 113  SLNSGNPILKSYDIIAVRPMNQNAFDYACEKAEVDLISIDFTDKMLFRLKHPMVKAAIQR 172

Query: 2222 GIYFEITYSSLLSDVQARKQMVYNTKLLMQWTRGKNLIFSSAAPSVCEIRGPYDVANLSC 2043
            GIYFEI YS LL D Q R+Q++ N KLL+ WTRGKNLI SS APSV E+RGP D+ NL C
Sbjct: 173  GIYFEIKYSDLLMDAQTRRQVISNAKLLVDWTRGKNLIISSGAPSVTELRGPNDIINLMC 232

Query: 2042 LLGLSMERAKAAIFKNSRSLLLNTVRKKQYFKNAIRIERISPIKPVDSKEAWFCDGNGWD 1863
            LLGLS +RA+AAI KN R+++   ++KK++ K A+R+E +S        +    D   WD
Sbjct: 233  LLGLSSQRARAAISKNCRNMIAKVLKKKRFHKEAVRVELLSSGDTFSLGQPLSEDCMKWD 292

Query: 1862 HISSGEGDLLLDDIAKSFASTVKVT-KTSKASDVAPVFDEISSHDIHLKDL 1713
             +SSGEGD+LLDD+AK+F +T  V  K+SKA D   V D + +H   +KD+
Sbjct: 293  PLSSGEGDMLLDDLAKAFDATNAVAHKSSKAIDFTSVLDGLPTHGFRVKDI 343


>ref|NP_200806.2| ribonuclease P subunit Rpp30 [Arabidopsis thaliana]
            gi|332009878|gb|AED97261.1| ribonuclease P subunit Rpp30
            [Arabidopsis thaliana]
          Length = 581

 Score =  369 bits (947), Expect = 2e-99
 Identities = 195/385 (50%), Positives = 259/385 (67%), Gaps = 1/385 (0%)
 Frame = -1

Query: 2762 MGFFDLNVPYNQEEERSLKLIPATPEQTKAKTNRLKIVVKLMELGYSGIAYTRSIKSGTV 2583
            MGFFDL++PYN+      K I         KT RLK+  K MELGY GIA+ RSIK   V
Sbjct: 1    MGFFDLSIPYNEPPRSGGKEIAG------GKTLRLKLATKAMELGYVGIAHNRSIKG--V 52

Query: 2582 LSDSDFCTIPLFPLSSLLKITPSLSSNVKFHKQLLGVPETSPFRQYTRLTINVDSLIQCS 2403
            +SD D CTIPL  L SL+K+ P L+S+V FH+ LLGVP T+PFRQYTRLT++V+S  QC 
Sbjct: 53   MSDKDSCTIPLLTLGSLIKVAPRLASSVGFHRDLLGVPRTTPFRQYTRLTVHVESNAQCQ 112

Query: 2402 SLNSSNPVLKTYDLVAARPLNQPTFDHVCKYAEVDIIAIDFSQWVPFRIKYPILQAVIKR 2223
            SLNS NP+LK+YD++A RP+NQ  FD+ C+ AEVD+I+IDF+  + FR+K+P+++A I+R
Sbjct: 113  SLNSGNPILKSYDIIAVRPMNQNAFDYACEKAEVDLISIDFTDKMLFRLKHPMVKAAIQR 172

Query: 2222 GIYFEITYSSLLSDVQARKQMVYNTKLLMQWTRGKNLIFSSAAPSVCEIRGPYDVANLSC 2043
            GIYFEI YS +L D Q R+Q++ N KLL+ WTRGKNLI SS APSV E+RGP DV NL  
Sbjct: 173  GIYFEIKYSDILMDAQTRRQVISNAKLLVDWTRGKNLIISSGAPSVTELRGPNDVINLMF 232

Query: 2042 LLGLSMERAKAAIFKNSRSLLLNTVRKKQYFKNAIRIERISPIKPVDSKEAWFCDGNGWD 1863
            LLGLS ERA+AAI KN R+++   ++KK++ K A+R+E +S       ++    D   WD
Sbjct: 233  LLGLSAERARAAISKNCRNMIAKVLKKKRFHKEAVRVELLSAGDTFSLEQPLSEDCMKWD 292

Query: 1862 HISSGEGDLLLDDIAKSF-ASTVKVTKTSKASDVAPVFDEISSHDIHLKDLCPGSGGELH 1686
             +SSGEGD+LLDD+AK+F A+ V   K+SKA D   V D +  H   +KD+     G   
Sbjct: 293  RLSSGEGDMLLDDLAKAFDATNVVAHKSSKAIDFTSVLDGLPKHGFRVKDIV----GTES 348

Query: 1685 QPNVSATKELKDSHEVFKQLNELEL 1611
                SA K +        Q++EL +
Sbjct: 349  VTQPSAAKVIDTQVHSSNQVSELRM 373