BLASTX nr result

ID: Coptis25_contig00008500 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008500
         (961 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADL36636.1| C2H2L domain class transcription factor [Malus x ...   162   8e-38
emb|CAN61204.1| hypothetical protein VITISV_013668 [Vitis vinifera]   160   3e-37
ref|XP_002264302.1| PREDICTED: zinc finger protein ZAT10-like [V...   160   5e-37
dbj|BAG15864.1| zinc-finger protein [Bruguiera gymnorhiza]            152   9e-35
ref|XP_002510108.1| zinc finger protein, putative [Ricinus commu...   149   7e-34

>gb|ADL36636.1| C2H2L domain class transcription factor [Malus x domestica]
          Length = 246

 Score =  162 bits (411), Expect = 8e-38
 Identities = 93/208 (44%), Positives = 110/208 (52%), Gaps = 10/208 (4%)
 Frame = -3

Query: 698 YLAICLIMLARGTTAPTDMKNPTTPSLPSMKNLDFKCKVCNKGFSSYQALGGHKASHRKP 519
           YLA+CLIMLARGTTA     +  +P+ P    L +KC VCNKGFSSYQALGGHKASHRK 
Sbjct: 61  YLALCLIMLARGTTAAVTTSSSESPAQPPSGELSYKCSVCNKGFSSYQALGGHKASHRKS 120

Query: 518 TTPGSE----DHQGXXXXXXXXXXXXXXXXXXXXXXNQNQHSGRGHECSICHRSFPSGQA 351
            +  +     DH                             S R HECSICH++FP+GQA
Sbjct: 121 DSSAAAAATVDH------------------PIAAASAGPATSARTHECSICHKTFPTGQA 162

Query: 350 LGGHKRCHYDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQNHRGFDLNLPSLNEFWPG 171
           LGGHKRCHYD                               Q+ RGFDLNLP+L EFWPG
Sbjct: 163 LGGHKRCHYD-------GGSAVTTSEGGGAGASSHSQSQSHQSQRGFDLNLPALPEFWPG 215

Query: 170 FGTVL------DQEVESPLPLKKPRFLI 105
           FG         +QEV+SP+  KKPR+L+
Sbjct: 216 FGADKKSQLSGEQEVQSPMVAKKPRWLL 243


>emb|CAN61204.1| hypothetical protein VITISV_013668 [Vitis vinifera]
          Length = 324

 Score =  160 bits (406), Expect = 3e-37
 Identities = 108/262 (41%), Positives = 125/262 (47%), Gaps = 11/262 (4%)
 Frame = -3

Query: 854 NLMALEALHNTPTLHEPDTDSFHSVVXXXXXXXXXXXXXXXXXXXXXXXXXEYLAICLIM 675
           ++MALEAL N+PT   P T  F                             EYLA+CLIM
Sbjct: 88  SVMALEAL-NSPTTMSP-TFKFEEAELHSLEPWTKRKRSRRPRFENPSTEEEYLALCLIM 145

Query: 674 LARG---TTAPTDMKNPTTPSLPSMKNLDFKCKVCNKGFSSYQALGGHKASHRKPTTPGS 504
           LARG   T   + M     P  P + NL +KC VCNK FSSYQALGGHKASHRK +T  +
Sbjct: 146 LARGGATTREESPMPLRAVPPPPPL-NLSYKCNVCNKAFSSYQALGGHKASHRKSSTDDA 204

Query: 503 EDHQGXXXXXXXXXXXXXXXXXXXXXXNQNQHSGRGHECSICHRSFPSGQALGGHKRCHY 324
                                           SG+ HECSICHR+FP+GQALGGHKRCHY
Sbjct: 205 STSANTTTTAGSSAL---------------NPSGKTHECSICHRTFPTGQALGGHKRCHY 249

Query: 323 DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQNHRGFDLNLPSLNEFWPGF-------- 168
           D                              S +HR FDLNLP+L +FWP F        
Sbjct: 250 D----------------GGSSGVTSSEGAVSSHSHRDFDLNLPALPDFWPRFRVDGGRKS 293

Query: 167 GTVLDQEVESPLPLKKPRFLIP 102
            T ++QEVESPLP KKPRFL P
Sbjct: 294 QTGVEQEVESPLPAKKPRFLFP 315


>ref|XP_002264302.1| PREDICTED: zinc finger protein ZAT10-like [Vitis vinifera]
          Length = 235

 Score =  160 bits (404), Expect = 5e-37
 Identities = 108/260 (41%), Positives = 123/260 (47%), Gaps = 11/260 (4%)
 Frame = -3

Query: 848 MALEALHNTPTLHEPDTDSFHSVVXXXXXXXXXXXXXXXXXXXXXXXXXEYLAICLIMLA 669
           MALEAL N+PT   P T  F                             EYLA+CLIMLA
Sbjct: 1   MALEAL-NSPTTMSP-TFKFEEAELHSLEPWTKRKRSRRPRFENPSTEEEYLALCLIMLA 58

Query: 668 RG---TTAPTDMKNPTTPSLPSMKNLDFKCKVCNKGFSSYQALGGHKASHRKPTTPGSED 498
           RG   T   + M     P  P + NL +KC VCNK FSSYQALGGHKASHRK +T  +  
Sbjct: 59  RGGATTREESPMPLRAVPPPPPL-NLSYKCNVCNKAFSSYQALGGHKASHRKSSTDDAST 117

Query: 497 HQGXXXXXXXXXXXXXXXXXXXXXXNQNQHSGRGHECSICHRSFPSGQALGGHKRCHYDX 318
                                         SG+ HECSICHR+FP+GQALGGHKRCHYD 
Sbjct: 118 SANTTTTAGSSAL---------------NPSGKTHECSICHRTFPTGQALGGHKRCHYD- 161

Query: 317 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQNHRGFDLNLPSLNEFWPGF--------GT 162
                                        S +HR FDLNLP+L +FWP F         T
Sbjct: 162 ---------------GGSSGVTSSEGAVSSHSHRDFDLNLPALPDFWPRFRVDGGRKSQT 206

Query: 161 VLDQEVESPLPLKKPRFLIP 102
            ++QEVESPLP KKPRFL P
Sbjct: 207 GVEQEVESPLPAKKPRFLFP 226


>dbj|BAG15864.1| zinc-finger protein [Bruguiera gymnorhiza]
          Length = 252

 Score =  152 bits (385), Expect = 9e-35
 Identities = 91/205 (44%), Positives = 104/205 (50%), Gaps = 7/205 (3%)
 Frame = -3

Query: 698 YLAICLIMLARGTT------APTDMKNPTTPSLPSMKNLDFKCKVCNKGFSSYQALGGHK 537
           YLA+CL+MLARGTT      AP     P  P+  S + L +KC VCNK F SYQALGGHK
Sbjct: 52  YLALCLVMLARGTTDRRSSPAPAVPLAPAPPTTSSEQKLSYKCAVCNKAFPSYQALGGHK 111

Query: 536 ASHRKPTTPGSEDHQGXXXXXXXXXXXXXXXXXXXXXXNQNQHSGRGHECSICHRSFPSG 357
           ASHRK   PG E                            +  SGR HECSICH+ FP+G
Sbjct: 112 ASHRK-NAPGEEPSTSSTTSNSVPTVTV------------SNGSGRVHECSICHKVFPTG 158

Query: 356 QALGGHKRCHYD-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQNHRGFDLNLPSLNEF 180
           QALGGHKRCHYD                               + +HRGFDLN+P+L EF
Sbjct: 159 QALGGHKRCHYDGGAAAAAAAAAGGEKSGLTSASEGVGSTNTLTHSHRGFDLNIPALPEF 218

Query: 179 WPGFGTVLDQEVESPLPLKKPRFLI 105
              F    D EV SPLP KKPR L+
Sbjct: 219 KADFFVSGDDEVMSPLPAKKPRVLL 243


>ref|XP_002510108.1| zinc finger protein, putative [Ricinus communis]
           gi|223550809|gb|EEF52295.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 256

 Score =  149 bits (377), Expect = 7e-34
 Identities = 104/269 (38%), Positives = 124/269 (46%), Gaps = 19/269 (7%)
 Frame = -3

Query: 848 MALEALHN----TPTLHEPDTDSFHSVVXXXXXXXXXXXXXXXXXXXXXXXXXEYLAICL 681
           MALEAL++    TPT    D+ S H +                           YLA+CL
Sbjct: 1   MALEALNSPTTATPTFQFEDSSSLHCLAEPWTKRKRSKRSHHHQPTEEE-----YLALCL 55

Query: 680 IMLARGTTAPTDMKNPTT-----------PSLPSMKNLD---FKCKVCNKGFSSYQALGG 543
           +MLARGTT+   +   TT           P LPS  +     +KC VCNK FSSYQALGG
Sbjct: 56  VMLARGTTSLAALSTSTTSHRHRSPTPSPPQLPSSSDDQKHRYKCTVCNKAFSSYQALGG 115

Query: 542 HKASHRK-PTTPGSEDHQGXXXXXXXXXXXXXXXXXXXXXXNQNQHSGRGHECSICHRSF 366
           HKASHRK     G ED                              SGR HECSICH++F
Sbjct: 116 HKASHRKLAGGSGGEDQSTSTTTSTSTTTASATV------------SGRTHECSICHKTF 163

Query: 365 PSGQALGGHKRCHYDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQNHRGFDLNLPSLN 186
           PSGQALGGHKRCHY+                              +Q+ RGFDLN+P+L 
Sbjct: 164 PSGQALGGHKRCHYE---GNVGAATATEKTSVVTSTISEGVGSTNTQSQRGFDLNIPALP 220

Query: 185 EFWPGFGTVLDQEVESPLPLKKPRFLIPA 99
           EF   F    D EV SPLP+KKPR ++ A
Sbjct: 221 EFAADFLISGDDEVMSPLPVKKPRLVLAA 249


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