BLASTX nr result

ID: Coptis25_contig00008497 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008497
         (1195 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520619.1| conserved hypothetical protein [Ricinus comm...   292   1e-76
ref|XP_002283938.1| PREDICTED: uncharacterized protein LOC100258...   291   3e-76
ref|XP_003519251.1| PREDICTED: dermal papilla-derived protein 6 ...   289   8e-76
ref|XP_004145651.1| PREDICTED: elongator complex protein 5-like ...   283   5e-74
gb|ABK94526.1| unknown [Populus trichocarpa]                          283   5e-74

>ref|XP_002520619.1| conserved hypothetical protein [Ricinus communis]
           gi|223540180|gb|EEF41755.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 376

 Score =  292 bits (748), Expect = 1e-76
 Identities = 151/270 (55%), Positives = 199/270 (73%), Gaps = 11/270 (4%)
 Frame = +3

Query: 3   LDCYSDPLGWKD---------GITGSNDAAVKICKNVRDLEKLLSYVLELGKGVVGQGKV 155
           LDCY+DPLGWKD          I+    +   +CK+V+DL+ L + +LELGKG+VGQGK 
Sbjct: 91  LDCYTDPLGWKDKLVEPGSRMDISHEASSVAHLCKDVKDLDSLYTLILELGKGLVGQGKA 150

Query: 156 RFSVAIDSVSVMLRHAALSSVASLINNLRSNNQVSSIFWLIHSDLHETRSTTVLEYMSSM 335
           RFSVAIDSV+ MLR A++S VA L++NLRS++Q+SSI+WL+HSDLHE R T++LEYMSSM
Sbjct: 151 RFSVAIDSVNEMLRDASMSKVAGLLSNLRSHDQISSIYWLLHSDLHEVRVTSMLEYMSSM 210

Query: 336 VASLDSMVHSSNGQRSSSLNIFSIEHNSGKGKFNVRLKRRNGRVKVMCEEFHVEQTGIKF 515
           VAS++ +  S NGQR +  N+  ++ N GKGK NVR KRRNGRV VMCEEF +EQ+G+ F
Sbjct: 211 VASIEPLNRSGNGQRWNLENLSQLQQNFGKGKLNVRFKRRNGRVSVMCEEFEIEQSGMNF 270

Query: 516 VVISSGNGMVNHTLVPKVQFNLQLSEKERADRENVVLPFEHQGIGKEVQIYDGRRSLPVE 695
             ISS + ++N  L PKVQF+LQLSEKE+ +R  VVLPFEHQG G  +QIYDGR+SL  +
Sbjct: 271 TSISSEDAIINQGLCPKVQFSLQLSEKEQVERAKVVLPFEHQGNGNPIQIYDGRKSLTED 330

Query: 696 QN-ET-SPVLTTEKSHAKADQGKGEIHYFR 779
           +N ET + +   +++ A +    GEI YFR
Sbjct: 331 KNGETLASIGNLQRNEASS---VGEIIYFR 357


>ref|XP_002283938.1| PREDICTED: uncharacterized protein LOC100258368 [Vitis vinifera]
           gi|296087267|emb|CBI33641.3| unnamed protein product
           [Vitis vinifera]
          Length = 376

 Score =  291 bits (744), Expect = 3e-76
 Identities = 149/268 (55%), Positives = 195/268 (72%), Gaps = 9/268 (3%)
 Frame = +3

Query: 3   LDCYSDPLGWKDGITGSNDAA---------VKICKNVRDLEKLLSYVLELGKGVVGQGKV 155
           LDCY+DPLGWKD + G  D             + ++VR+L+ LLS ++E+G+ +  QGK 
Sbjct: 91  LDCYTDPLGWKDSLKGPLDTENFSLKDPIEAVLFRHVRNLDLLLSAIIEMGEALARQGKG 150

Query: 156 RFSVAIDSVSVMLRHAALSSVASLINNLRSNNQVSSIFWLIHSDLHETRSTTVLEYMSSM 335
           RFSV+IDSV+ MLRHA+LSSVA+L++ +RS++++SS FWL+HSDLHE R+   LEY+SSM
Sbjct: 151 RFSVSIDSVTEMLRHASLSSVANLLSKVRSHDRISSTFWLLHSDLHEIRAIAALEYLSSM 210

Query: 336 VASLDSMVHSSNGQRSSSLNIFSIEHNSGKGKFNVRLKRRNGRVKVMCEEFHVEQTGIKF 515
           V SL+ M  S NGQR     +  +E NS KGKF+VR KRRNGRV+VMCE+FH++Q+GI F
Sbjct: 211 VGSLEPMNLSLNGQRGDLEKLSLLEQNSRKGKFHVRFKRRNGRVRVMCEDFHIKQSGINF 270

Query: 516 VVISSGNGMVNHTLVPKVQFNLQLSEKERADRENVVLPFEHQGIGKEVQIYDGRRSLPVE 695
             +SS  G++N  L+PKVQFNLQLSEKER DR  VVLPFEHQG G+ + IYDGRRSL   
Sbjct: 271 TPVSSEEGIINQGLLPKVQFNLQLSEKERIDRAKVVLPFEHQGNGEPMHIYDGRRSLSEG 330

Query: 696 QNETSPVLTTEKSHAKADQGKGEIHYFR 779
           ++E + VL +E      + GKGEI YFR
Sbjct: 331 KDEKASVL-SENLQTNENSGKGEIIYFR 357


>ref|XP_003519251.1| PREDICTED: dermal papilla-derived protein 6 homolog [Glycine max]
          Length = 373

 Score =  289 bits (740), Expect = 8e-76
 Identities = 156/268 (58%), Positives = 190/268 (70%), Gaps = 9/268 (3%)
 Frame = +3

Query: 3   LDCYSDPLGWKDGITGSNDA---------AVKICKNVRDLEKLLSYVLELGKGVVGQGKV 155
           LDCY+DPLGWKD    + +A         A    K+V+D++KL S + ELG+G+VG+ K 
Sbjct: 92  LDCYTDPLGWKDKTRKTVNATNPSQQISLATSSYKSVKDVDKLFSVITELGRGLVGENKA 151

Query: 156 RFSVAIDSVSVMLRHAALSSVASLINNLRSNNQVSSIFWLIHSDLHETRSTTVLEYMSSM 335
           RF VAIDS+S +LRHA+L SVA L++NLRS++Q+SSIF L+HSDLHE ++  VLEYMSSM
Sbjct: 152 RFCVAIDSLSELLRHASLQSVAGLLSNLRSHDQISSIFGLLHSDLHEEKAVAVLEYMSSM 211

Query: 336 VASLDSMVHSSNGQRSSSLNIFSIEHNSGKGKFNVRLKRRNGRVKVMCEEFHVEQTGIKF 515
           VAS+D   HS++GQ+    N  S E N  KGKFN R KRRNGRV+V CEEF+VE  GI F
Sbjct: 212 VASVDPYHHSADGQKECLENSVS-EQNFTKGKFNARFKRRNGRVRVTCEEFNVESGGINF 270

Query: 516 VVISSGNGMVNHTLVPKVQFNLQLSEKERADRENVVLPFEHQGIGKEVQIYDGRRSLPVE 695
           V +SS +G     LVPKVQFNLQLSEKER DR NVVLPFEHQG GK +QIYDGRRSL   
Sbjct: 271 VSVSSVDGTAIAGLVPKVQFNLQLSEKERIDRSNVVLPFEHQGNGKPIQIYDGRRSLEES 330

Query: 696 QNETSPVLTTEKSHAKADQGKGEIHYFR 779
            +E +P+     S  K D   GEI YFR
Sbjct: 331 NSEANPI----SSGKKEDSAMGEIIYFR 354


>ref|XP_004145651.1| PREDICTED: elongator complex protein 5-like [Cucumis sativus]
          Length = 375

 Score =  283 bits (725), Expect = 5e-74
 Identities = 145/268 (54%), Positives = 196/268 (73%), Gaps = 9/268 (3%)
 Frame = +3

Query: 3   LDCYSDPLGWKDG-ITGSNDAAVK--------ICKNVRDLEKLLSYVLELGKGVVGQGKV 155
           LDCY+DPLGWK   + G N + V         +C NV D++KL S ++ LGKG VG+G V
Sbjct: 91  LDCYTDPLGWKQRFMEGENVSNVDQEVSNLSHLCTNVGDMDKLFSSIIALGKGFVGEGTV 150

Query: 156 RFSVAIDSVSVMLRHAALSSVASLINNLRSNNQVSSIFWLIHSDLHETRSTTVLEYMSSM 335
           RF VA+DSV+ MLRH+++S++A L+++LRSN+ VSS  WL+H DLHE +     EYMSS+
Sbjct: 151 RFCVAVDSVTNMLRHSSISALAGLLSSLRSNDSVSSTLWLVHEDLHEEKVIAAFEYMSSI 210

Query: 336 VASLDSMVHSSNGQRSSSLNIFSIEHNSGKGKFNVRLKRRNGRVKVMCEEFHVEQTGIKF 515
           VA+L+++  S    RS+  N + +EH S KG+F+VR+KRRNGRV+V+ E+F+VEQ+GIKF
Sbjct: 211 VATLEALTPSPYVSRSNMDNSY-LEHRSTKGRFHVRMKRRNGRVRVISEDFNVEQSGIKF 269

Query: 516 VVISSGNGMVNHTLVPKVQFNLQLSEKERADRENVVLPFEHQGIGKEVQIYDGRRSLPVE 695
             ISS + ++N +L+PKVQFNLQLSEKER DR  VVLPFEHQG GK +QIYDGRRS    
Sbjct: 270 TSISSEDAVINQSLIPKVQFNLQLSEKERNDRARVVLPFEHQGTGKPIQIYDGRRSFSES 329

Query: 696 QNETSPVLTTEKSHAKADQGKGEIHYFR 779
           +++ +P++T EK +     GKGEI YFR
Sbjct: 330 KDDNTPLMTNEKGNDDG-SGKGEIVYFR 356


>gb|ABK94526.1| unknown [Populus trichocarpa]
          Length = 379

 Score =  283 bits (725), Expect = 5e-74
 Identities = 144/272 (52%), Positives = 196/272 (72%), Gaps = 13/272 (4%)
 Frame = +3

Query: 3   LDCYSDPLGWKDGITGSND----------AAVKICKNVRDLEKLLSYVLELGKGVVGQGK 152
           LDCY+DPL WKD + GS +          +  ++CK+V+DL+KL S +LELGKG+VGQGK
Sbjct: 91  LDCYTDPLCWKDQLMGSGNFMDASHETSSSLSRVCKDVKDLDKLYSMILELGKGLVGQGK 150

Query: 153 VRFSVAIDSVSVMLRHAALSSVASLINNLRSNNQVSSIFWLIHSDLHETRSTTVLEYMSS 332
            RFSVAID+++ MLRH +  +VA L++NLRS+ Q+SSIFWL+HSDLHE + T+ LEY+SS
Sbjct: 151 DRFSVAIDTINEMLRHTSTPTVAGLLSNLRSHEQISSIFWLLHSDLHEIKVTSALEYLSS 210

Query: 333 MVASLDSMVHSSNGQRSSSLNIFSIEHNSGKGKFNVRLKRRNGRVKVMCEEFHVEQTGIK 512
           +VAS++ +  ++ G+R    N+  +E N GKGK  VR KRRNGRV+V+ E FH++Q+   
Sbjct: 211 VVASVEPLHQTAGGKRGDLENLSLLEQNFGKGKLQVRFKRRNGRVRVVNEGFHIDQSSNN 270

Query: 513 FVVISSGNGMVNHT---LVPKVQFNLQLSEKERADRENVVLPFEHQGIGKEVQIYDGRRS 683
           F  +SS +G+VN     LVPKVQFNL+L+E+ER DR  VVLPFEHQG G  + IYDGRRS
Sbjct: 271 FTSVSSEDGLVNQINQGLVPKVQFNLELTERERIDRAKVVLPFEHQGDGGPIHIYDGRRS 330

Query: 684 LPVEQNETSPVLTTEKSHAKADQGKGEIHYFR 779
           L   +++T   L++  +  K D G+GEI YFR
Sbjct: 331 L--TESKTEATLSSSGNSQKTDSGEGEIIYFR 360


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