BLASTX nr result

ID: Coptis25_contig00008477 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008477
         (858 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285807.2| PREDICTED: uncharacterized protein LOC100252...   142   7e-32
ref|XP_002513883.1| conserved hypothetical protein [Ricinus comm...   142   1e-31
emb|CBI41084.3| unnamed protein product [Vitis vinifera]              141   2e-31
ref|XP_003635513.1| PREDICTED: uncharacterized protein LOC100261...   141   2e-31
gb|AFK40825.1| unknown [Lotus japonicus]                              130   3e-28

>ref|XP_002285807.2| PREDICTED: uncharacterized protein LOC100252409 [Vitis vinifera]
          Length = 208

 Score =  142 bits (359), Expect = 7e-32
 Identities = 77/142 (54%), Positives = 88/142 (61%), Gaps = 12/142 (8%)
 Frame = +2

Query: 110 EKMLLGKRPRPHIKRTTSITEFTVDLGYLEETXXXXXXXXXXXXXXXXXX---------- 259
           EKMLLGKRPRP +KRTTS+TEFT+D   +++                             
Sbjct: 50  EKMLLGKRPRPPMKRTTSMTEFTLDPNSVQQPPSDSQNPFKDRPKSVGFGGDPYRQPSGV 109

Query: 260 --IGLERFMNKNQSPRTLRRNSAEFVETAHFLRACGLCNRRLAPGRDIYMYRGDTPFCSL 433
              G +       SPR  RR SA+FV+ +HFLRAC LC RRL  GRDIYMYRGD+ FCSL
Sbjct: 110 DGYGFDHRFLSAVSPRNPRRYSADFVDNSHFLRACCLCKRRLVSGRDIYMYRGDSAFCSL 169

Query: 434 ECRQQQMNQDERKEKCSLASNK 499
           ECRQQQMNQDERKEKCSLAS K
Sbjct: 170 ECRQQQMNQDERKEKCSLASKK 191


>ref|XP_002513883.1| conserved hypothetical protein [Ricinus communis]
           gi|223546969|gb|EEF48466.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 172

 Score =  142 bits (358), Expect = 1e-31
 Identities = 78/132 (59%), Positives = 88/132 (66%), Gaps = 4/132 (3%)
 Frame = +2

Query: 116 MLLGKRPRPHIKRTTSITEFTVDL---GYLEETXXXXXXXXXXXXXXXXXXIGLERFMNK 286
           MLLGKRPRP +KRTTS++E T DL   G  E                       +RF+  
Sbjct: 1   MLLGKRPRPPMKRTTSLSEITFDLDTNGSCESAQQAAGFGGDGTGTGGGQQQLDQRFLAA 60

Query: 287 NQ-SPRTLRRNSAEFVETAHFLRACGLCNRRLAPGRDIYMYRGDTPFCSLECRQQQMNQD 463
              SPR  RR SA+F+ETAHFLR+C LC+RRL  GRDIYMYRGD+ FCSLECRQQQMNQD
Sbjct: 61  ATISPRNHRRASADFLETAHFLRSCSLCHRRLVTGRDIYMYRGDSAFCSLECRQQQMNQD 120

Query: 464 ERKEKCSLASNK 499
           ERKEKCSLAS K
Sbjct: 121 ERKEKCSLASKK 132


>emb|CBI41084.3| unnamed protein product [Vitis vinifera]
          Length = 189

 Score =  141 bits (356), Expect = 2e-31
 Identities = 77/131 (58%), Positives = 86/131 (65%), Gaps = 1/131 (0%)
 Frame = +2

Query: 110 EKMLLGKRPRPHIKRTTSITEFTVDLGYLEETXXXXXXXXXXXXXXXXXXIGLERFMNKN 289
           +KM+LGKR RP IKRTTS+T  TVDLG+                          RF+   
Sbjct: 7   KKMMLGKRARPQIKRTTSMTGITVDLGHNMVAGSNGYDP---------------RFLAAT 51

Query: 290 QSPRTLRRNSAEFVETAHFLRACGLCNRRLAPGRDIYMYRGDTPFCSLECRQQQMNQDER 469
            SPR  RR+S EF+ETAHFLR CGLC RRL PGRDIYMYRGDT FCSLECR+QQM QDER
Sbjct: 52  VSPRIHRRSSGEFMETAHFLRTCGLCQRRLQPGRDIYMYRGDTAFCSLECREQQMKQDER 111

Query: 470 KEKCS-LASNK 499
           KEK S +AS K
Sbjct: 112 KEKYSGMASKK 122


>ref|XP_003635513.1| PREDICTED: uncharacterized protein LOC100261790 [Vitis vinifera]
          Length = 160

 Score =  141 bits (355), Expect = 2e-31
 Identities = 77/137 (56%), Positives = 87/137 (63%), Gaps = 9/137 (6%)
 Frame = +2

Query: 116 MLLGKRPRPHIKRTTSITEFTVDLGYLEETXXXXXXXXXXXXXXXXXXIGL--------E 271
           M+LGKR RP IKRTTS+T  TVDLG++E                      +         
Sbjct: 1   MMLGKRARPQIKRTTSMTGITVDLGHVEAPAPADPQNPIKDVHAAARVENMVAGSNGYDP 60

Query: 272 RFMNKNQSPRTLRRNSAEFVETAHFLRACGLCNRRLAPGRDIYMYRGDTPFCSLECRQQQ 451
           RF+    SPR  RR+S EF+ETAHFLR CGLC RRL PGRDIYMYRGDT FCSLECR+QQ
Sbjct: 61  RFLAATVSPRIHRRSSGEFMETAHFLRTCGLCQRRLQPGRDIYMYRGDTAFCSLECREQQ 120

Query: 452 MNQDERKEKCS-LASNK 499
           M QDERKEK S +AS K
Sbjct: 121 MKQDERKEKYSGMASKK 137


>gb|AFK40825.1| unknown [Lotus japonicus]
          Length = 148

 Score =  130 bits (328), Expect = 3e-28
 Identities = 71/135 (52%), Positives = 82/135 (60%), Gaps = 7/135 (5%)
 Frame = +2

Query: 116 MLLGKRPRPHIKRTTSITEFTVDLGYLEETXXXXXXXXXXXXXXXXXXIGLERFMNKNQS 295
           M+LGKRPRP +KRTTS++E T DL    E                    G   F   +QS
Sbjct: 1   MMLGKRPRPPMKRTTSMSEITFDLNTAPEDGGAAGNRHG----------GAAGFNGSDQS 50

Query: 296 -------PRTLRRNSAEFVETAHFLRACGLCNRRLAPGRDIYMYRGDTPFCSLECRQQQM 454
                  PR  R +S +F +T  FLR C LC RRLAPGRDIYMYRGD+ FCSLECRQQQM
Sbjct: 51  RILATVSPRNHRTHSVDFAQTPDFLRCCFLCKRRLAPGRDIYMYRGDSAFCSLECRQQQM 110

Query: 455 NQDERKEKCSLASNK 499
           NQDERK+KC +AS K
Sbjct: 111 NQDERKDKCCVASKK 125


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