BLASTX nr result

ID: Coptis25_contig00008471 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008471
         (1201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280827.1| PREDICTED: UPF0160 protein MYG1, mitochondri...   478   e-154
emb|CBI34574.3| unnamed protein product [Vitis vinifera]              472   e-152
emb|CAN62285.1| hypothetical protein VITISV_034702 [Vitis vinifera]   445   e-144
ref|XP_002518897.1| Protein MYG1, putative [Ricinus communis] gi...   447   e-143
ref|XP_004143846.1| PREDICTED: UPF0160 protein-like [Cucumis sat...   439   e-143

>ref|XP_002280827.1| PREDICTED: UPF0160 protein MYG1, mitochondrial-like [Vitis
           vinifera]
          Length = 361

 Score =  478 bits (1230), Expect(2) = e-154
 Identities = 234/311 (75%), Positives = 265/311 (85%)
 Frame = +3

Query: 45  RSLSQSLIFFQKPTLLLLPLMAXXXXXXXXXXXXXXXPKRVGTHNGTFHCDEALGCYMIR 224
           R  ++ L FF  P  L LPLMA                KRVGTHNG+FHCDEALGC+MIR
Sbjct: 6   RGFTEKLFFF--PRYLTLPLMAHSRVSAFSTAPGL---KRVGTHNGSFHCDEALGCFMIR 60

Query: 225 LTDKFNSAEIVRTRDSKVLETLDAVLDVGGVYDESKDRYDHHQKGFEEVFGHGFGTKLSS 404
           LTDKF  A+IVRTRD KVL+ LDAVLDVGGVYD S+DRYDHHQKGF EVFGHGF TKLSS
Sbjct: 61  LTDKFRDAQIVRTRDQKVLDGLDAVLDVGGVYDPSRDRYDHHQKGFGEVFGHGFSTKLSS 120

Query: 405 AGLVYKHYGMEIIAKELKLDQGHPDVHHLFLAVYKSFVEAIDANDNGINKYDTDLPKRYV 584
           AGLVYKH+GMEIIAKEL+LDQGHPDV  LFLAVYKSF+EA+DA DNGIN+YDTD P RYV
Sbjct: 121 AGLVYKHFGMEIIAKELQLDQGHPDVLRLFLAVYKSFMEAVDAVDNGINQYDTDQPLRYV 180

Query: 585 DNTKLPSRVGRLNLDWMDLDNSAEKENEAFHRAMSLAGSEFIENVRFYARSWLPARSIVI 764
           +NT L SRVG+LNLDWMD D S+EKENEAF RAM+L+GSEF++NVRF+A+SWLPARSIV+
Sbjct: 181 NNTHLSSRVGKLNLDWMDPDQSSEKENEAFERAMNLSGSEFLDNVRFHAKSWLPARSIVM 240

Query: 765 DCLAARGDVDASGEIMKLHKFCPWKLHIYELEEEMKIDPPIKYVLYEADRSKNWRVQAVA 944
           +CLAAR D+D SGEIM L++FCPWKLH++ELEEEMKIDPPIKYVLY+ DRSK+WRVQAVA
Sbjct: 241 ECLAARMDIDPSGEIMVLNRFCPWKLHLFELEEEMKIDPPIKYVLYQDDRSKHWRVQAVA 300

Query: 945 VSPDKFESRKP 977
           V+PDKFESRKP
Sbjct: 301 VAPDKFESRKP 311



 Score = 94.0 bits (232), Expect(2) = e-154
 Identities = 42/52 (80%), Positives = 48/52 (92%)
 Frame = +1

Query: 1045 KFESRKPLPAQWRGLRDEELSKESSILGCVFVHMSGFIGGNATYDGALAMAR 1200
            KFESRKPLP+QWRGLRD+ELS+E+ I GCVFVHMSGFIGGN  Y+GALAMA+
Sbjct: 305  KFESRKPLPSQWRGLRDDELSREAGIPGCVFVHMSGFIGGNQNYEGALAMAK 356


>emb|CBI34574.3| unnamed protein product [Vitis vinifera]
          Length = 338

 Score =  472 bits (1214), Expect(2) = e-152
 Identities = 223/273 (81%), Positives = 252/273 (92%)
 Frame = +3

Query: 159 KRVGTHNGTFHCDEALGCYMIRLTDKFNSAEIVRTRDSKVLETLDAVLDVGGVYDESKDR 338
           KRVGTHNG+FHCDEALGC+MIRLTDKF  A+IVRTRD KVL+ LDAVLDVGGVYD S+DR
Sbjct: 16  KRVGTHNGSFHCDEALGCFMIRLTDKFRDAQIVRTRDQKVLDGLDAVLDVGGVYDPSRDR 75

Query: 339 YDHHQKGFEEVFGHGFGTKLSSAGLVYKHYGMEIIAKELKLDQGHPDVHHLFLAVYKSFV 518
           YDHHQKGF EVFGHGF TKLSSAGLVYKH+GMEIIAKEL+LDQGHPDV  LFLAVYKSF+
Sbjct: 76  YDHHQKGFGEVFGHGFSTKLSSAGLVYKHFGMEIIAKELQLDQGHPDVLRLFLAVYKSFM 135

Query: 519 EAIDANDNGINKYDTDLPKRYVDNTKLPSRVGRLNLDWMDLDNSAEKENEAFHRAMSLAG 698
           EA+DA DNGIN+YDTD P RYV+NT L SRVG+LNLDWMD D S+EKENEAF RAM+L+G
Sbjct: 136 EAVDAVDNGINQYDTDQPLRYVNNTHLSSRVGKLNLDWMDPDQSSEKENEAFERAMNLSG 195

Query: 699 SEFIENVRFYARSWLPARSIVIDCLAARGDVDASGEIMKLHKFCPWKLHIYELEEEMKID 878
           SEF++NVRF+A+SWLPARSIV++CLAAR D+D SGEIM L++FCPWKLH++ELEEEMKID
Sbjct: 196 SEFLDNVRFHAKSWLPARSIVMECLAARMDIDPSGEIMVLNRFCPWKLHLFELEEEMKID 255

Query: 879 PPIKYVLYEADRSKNWRVQAVAVSPDKFESRKP 977
           PPIKYVLY+ DRSK+WRVQAVAV+PDKFESRKP
Sbjct: 256 PPIKYVLYQDDRSKHWRVQAVAVAPDKFESRKP 288



 Score = 94.0 bits (232), Expect(2) = e-152
 Identities = 42/52 (80%), Positives = 48/52 (92%)
 Frame = +1

Query: 1045 KFESRKPLPAQWRGLRDEELSKESSILGCVFVHMSGFIGGNATYDGALAMAR 1200
            KFESRKPLP+QWRGLRD+ELS+E+ I GCVFVHMSGFIGGN  Y+GALAMA+
Sbjct: 282  KFESRKPLPSQWRGLRDDELSREAGIPGCVFVHMSGFIGGNQNYEGALAMAK 333


>emb|CAN62285.1| hypothetical protein VITISV_034702 [Vitis vinifera]
          Length = 325

 Score =  445 bits (1145), Expect(2) = e-144
 Identities = 216/273 (79%), Positives = 241/273 (88%)
 Frame = +3

Query: 159 KRVGTHNGTFHCDEALGCYMIRLTDKFNSAEIVRTRDSKVLETLDAVLDVGGVYDESKDR 338
           KRVGTHNG+FHCDEALGC+MIRLTDKF  A+IVRTRD KVL+ LDAVLDVGGVYD S+DR
Sbjct: 6   KRVGTHNGSFHCDEALGCFMIRLTDKFRDAQIVRTRDQKVLDGLDAVLDVGGVYDPSRDR 65

Query: 339 YDHHQKGFEEVFGHGFGTKLSSAGLVYKHYGMEIIAKELKLDQGHPDVHHLFLAVYKSFV 518
           YDHHQKGF EVFGHGF TKLSSAGLVYKH+GMEIIAKEL+LDQGHPDV  LFLAVYKSF+
Sbjct: 66  YDHHQKGFGEVFGHGFSTKLSSAGLVYKHFGMEIIAKELQLDQGHPDVLRLFLAVYKSFM 125

Query: 519 EAIDANDNGINKYDTDLPKRYVDNTKLPSRVGRLNLDWMDLDNSAEKENEAFHRAMSLAG 698
           EA+DA DNGIN+YDTD P RYV+NT L SRVG+LNLDWMD D S+EKENEAF RAM+L+G
Sbjct: 126 EAVDAVDNGINQYDTDQPXRYVNNTHLSSRVGKLNLDWMDPDQSSEKENEAFERAMNLSG 185

Query: 699 SEFIENVRFYARSWLPARSIVIDCLAARGDVDASGEIMKLHKFCPWKLHIYELEEEMKID 878
           SE      F     LPARSIV++CLAAR D+D SGEIM L++FCPWKLH++ELEEEMKID
Sbjct: 186 SEMFV---FMQSHGLPARSIVMECLAARMDIDPSGEIMVLNRFCPWKLHLFELEEEMKID 242

Query: 879 PPIKYVLYEADRSKNWRVQAVAVSPDKFESRKP 977
           PPIKYVLY+ DRSK+WRVQAVAV+PDKFESRKP
Sbjct: 243 PPIKYVLYQDDRSKHWRVQAVAVAPDKFESRKP 275



 Score = 94.0 bits (232), Expect(2) = e-144
 Identities = 42/52 (80%), Positives = 48/52 (92%)
 Frame = +1

Query: 1045 KFESRKPLPAQWRGLRDEELSKESSILGCVFVHMSGFIGGNATYDGALAMAR 1200
            KFESRKPLP+QWRGLRD+ELS+E+ I GCVFVHMSGFIGGN  Y+GALAMA+
Sbjct: 269  KFESRKPLPSQWRGLRDDELSREAGIPGCVFVHMSGFIGGNQNYEGALAMAK 320


>ref|XP_002518897.1| Protein MYG1, putative [Ricinus communis]
           gi|223541884|gb|EEF43430.1| Protein MYG1, putative
           [Ricinus communis]
          Length = 373

 Score =  447 bits (1150), Expect(2) = e-143
 Identities = 209/273 (76%), Positives = 247/273 (90%)
 Frame = +3

Query: 156 PKRVGTHNGTFHCDEALGCYMIRLTDKFNSAEIVRTRDSKVLETLDAVLDVGGVYDESKD 335
           PKRVGTHNG+FHCDEALGC+MIRLT+KF++AEIVR+RD +VLE+LDAVLDVGGVYD   D
Sbjct: 50  PKRVGTHNGSFHCDEALGCFMIRLTNKFSNAEIVRSRDLQVLESLDAVLDVGGVYDPVHD 109

Query: 336 RYDHHQKGFEEVFGHGFGTKLSSAGLVYKHYGMEIIAKELKLDQGHPDVHHLFLAVYKSF 515
           RYDHHQKGFEEVFGHGF TKLSSAGLVYKH+G EIIAKEL+LD+GHP+VH LFLA+YKSF
Sbjct: 110 RYDHHQKGFEEVFGHGFTTKLSSAGLVYKHFGKEIIAKELQLDEGHPNVHRLFLAIYKSF 169

Query: 516 VEAIDANDNGINKYDTDLPKRYVDNTKLPSRVGRLNLDWMDLDNSAEKENEAFHRAMSLA 695
           +EAIDA DNGIN+YDTD P RYV+NT L SRVGRLNLDW++ D S EKENE F RAM+LA
Sbjct: 170 MEAIDAVDNGINQYDTDKPPRYVNNTHLSSRVGRLNLDWIEPDQSPEKENEVFQRAMTLA 229

Query: 696 GSEFIENVRFYARSWLPARSIVIDCLAARGDVDASGEIMKLHKFCPWKLHIYELEEEMKI 875
           GSEF++++ ++A+SWLPARSIV++CL AR DVD SGEIM L  FCPWKLH++E+EEE+KI
Sbjct: 230 GSEFLDSLHYHAKSWLPARSIVMECLEARSDVDPSGEIMVLATFCPWKLHLFEIEEELKI 289

Query: 876 DPPIKYVLYEADRSKNWRVQAVAVSPDKFESRK 974
           +P IKYVLY+ DRSK+WRVQAVAV+PD+FESR+
Sbjct: 290 EPSIKYVLYQDDRSKHWRVQAVAVAPDRFESRR 322



 Score = 90.1 bits (222), Expect(2) = e-143
 Identities = 41/52 (78%), Positives = 47/52 (90%)
 Frame = +1

Query: 1045 KFESRKPLPAQWRGLRDEELSKESSILGCVFVHMSGFIGGNATYDGALAMAR 1200
            +FESR+ LPAQWRGLRD+ELS+ES I  CVFVHMSGFIGGN +Y+GALAMAR
Sbjct: 317  RFESRRALPAQWRGLRDDELSRESGIPACVFVHMSGFIGGNKSYEGALAMAR 368


>ref|XP_004143846.1| PREDICTED: UPF0160 protein-like [Cucumis sativus]
           gi|449509379|ref|XP_004163571.1| PREDICTED: UPF0160
           protein-like [Cucumis sativus]
          Length = 345

 Score =  439 bits (1128), Expect(2) = e-143
 Identities = 207/273 (75%), Positives = 244/273 (89%)
 Frame = +3

Query: 159 KRVGTHNGTFHCDEALGCYMIRLTDKFNSAEIVRTRDSKVLETLDAVLDVGGVYDESKDR 338
           KRVGTH+G+FHCDEALGC+MIRLTDKF++A+IVRTRD +VL+ LDAVLDVGGVYD S DR
Sbjct: 23  KRVGTHHGSFHCDEALGCFMIRLTDKFSNAQIVRTRDPQVLQGLDAVLDVGGVYDPSHDR 82

Query: 339 YDHHQKGFEEVFGHGFGTKLSSAGLVYKHYGMEIIAKELKLDQGHPDVHHLFLAVYKSFV 518
           YDHHQKGFEEVFGHGF TKLSSAGLVYKH+G EIIAKEL++D+GHPDVH LFLAVYKSF+
Sbjct: 83  YDHHQKGFEEVFGHGFSTKLSSAGLVYKHFGKEIIAKELQVDEGHPDVHRLFLAVYKSFM 142

Query: 519 EAIDANDNGINKYDTDLPKRYVDNTKLPSRVGRLNLDWMDLDNSAEKENEAFHRAMSLAG 698
           EAIDA DNGIN+YDTD P +YV+NT L SRVGRLNLDW+D D S E EN+AF +AM+LAG
Sbjct: 143 EAIDAVDNGINQYDTDKPPKYVNNTHLSSRVGRLNLDWIDPDQSPENENKAFEKAMALAG 202

Query: 699 SEFIENVRFYARSWLPARSIVIDCLAARGDVDASGEIMKLHKFCPWKLHIYELEEEMKID 878
           +EF+++VRF+A+SWLPARSIV+  LAAR  +D SGEIM +  FCPWKLH++ELE E+KI+
Sbjct: 203 NEFLDSVRFHAKSWLPARSIVMGSLAARHTIDPSGEIMVMTTFCPWKLHLFELEAELKIE 262

Query: 879 PPIKYVLYEADRSKNWRVQAVAVSPDKFESRKP 977
             IKYVLY+ DRSK+WRVQAVAVSPD+FESR+P
Sbjct: 263 NSIKYVLYQDDRSKHWRVQAVAVSPDRFESRRP 295



 Score = 98.2 bits (243), Expect(2) = e-143
 Identities = 45/52 (86%), Positives = 48/52 (92%)
 Frame = +1

Query: 1045 KFESRKPLPAQWRGLRDEELSKESSILGCVFVHMSGFIGGNATYDGALAMAR 1200
            +FESR+PLPAQWRGLRDEELSKES I GCVFVHMSGFIGGN TYDGAL MA+
Sbjct: 289  RFESRRPLPAQWRGLRDEELSKESGIPGCVFVHMSGFIGGNQTYDGALTMAK 340


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