BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008458
         (601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525071.1| Ribulose-1,5 bisphosphate carboxylase/oxygen...   171   7e-41
emb|CBI25318.3| unnamed protein product [Vitis vinifera]              161   7e-38
ref|XP_002275729.1| PREDICTED: ribulose-1,5 bisphosphate carboxy...   161   7e-38
ref|XP_002878015.1| SET domain-containing protein [Arabidopsis l...   149   3e-34
ref|XP_004157308.1| PREDICTED: uncharacterized protein LOC101232...   147   1e-33

>ref|XP_002525071.1| Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit
           N-methyltransferase, chloroplast precursor, putative
           [Ricinus communis] gi|223535652|gb|EEF37318.1|
           Ribulose-1,5 bisphosphate carboxylase/oxygenase large
           subunit N-methyltransferase, chloroplast precursor,
           putative [Ricinus communis]
          Length = 456

 Score =  171 bits (434), Expect = 7e-41
 Identities = 90/157 (57%), Positives = 117/157 (74%)
 Frame = +3

Query: 6   HTVPIVTNTSTLDSCTKSFIIKEIRSAGGKGKGIPQSLRAFARVLCAASLEELKDLELEA 185
           H +P   + +  +S   SF+IKE+RSAGGKGKG+PQSLRAFARVLC  S ++L DL LEA
Sbjct: 289 HHIPATKDDNGFNSSWDSFLIKEVRSAGGKGKGLPQSLRAFARVLCCTSHQDLNDLVLEA 348

Query: 186 VKTDGRVARRPLKDMSREIESHLFLLSQIEPLIRDYDASIEFLKIVNSRYIGGKFSLRKQ 365
            +TDGR+ARR L++ SREI++H  LLS+I  +I +Y ASI+ L+   S  I  +F+LR+Q
Sbjct: 349 AQTDGRLARRALENSSREIQAHEILLSRINQVIEEYSASIKLLESSTSLSICKRFALRRQ 408

Query: 366 MAQDLLSGELRILKSASAWLENYCCILSKEIQQRSQT 476
           MA DLL+GELR+LKSASAWL+NYC  L   +QQ  QT
Sbjct: 409 MALDLLTGELRVLKSASAWLKNYCTSL---LQQTPQT 442


>emb|CBI25318.3| unnamed protein product [Vitis vinifera]
          Length = 487

 Score =  161 bits (408), Expect = 7e-38
 Identities = 82/149 (55%), Positives = 108/149 (72%)
 Frame = +3

Query: 3   KHTVPIVTNTSTLDSCTKSFIIKEIRSAGGKGKGIPQSLRAFARVLCAASLEELKDLELE 182
           +H  P + + ++  S   SF IKE++SA GKG+GIPQSLRAFAR+ C  S +EL DL +E
Sbjct: 319 RHCPPKIGDVNSFSSMGNSFTIKEVKSARGKGRGIPQSLRAFARIFCCTSPQELSDLAVE 378

Query: 183 AVKTDGRVARRPLKDMSREIESHLFLLSQIEPLIRDYDASIEFLKIVNSRYIGGKFSLRK 362
           A + DGR+ARRPLK  +REI++H  LLS I  LI +Y+ SI+ L + +  Y    F+LRK
Sbjct: 379 AAQNDGRLARRPLKSWNREIQAHQVLLSWITRLINEYNTSIKSLPLASPLY--ETFALRK 436

Query: 363 QMAQDLLSGELRILKSASAWLENYCCILS 449
           QMA+DLL+GELR+LKSA AWLENYC  L+
Sbjct: 437 QMARDLLTGELRVLKSAGAWLENYCATLT 465


>ref|XP_002275729.1| PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large
           subunit N-methyltransferase, chloroplastic-like [Vitis
           vinifera]
          Length = 480

 Score =  161 bits (408), Expect = 7e-38
 Identities = 82/149 (55%), Positives = 108/149 (72%)
 Frame = +3

Query: 3   KHTVPIVTNTSTLDSCTKSFIIKEIRSAGGKGKGIPQSLRAFARVLCAASLEELKDLELE 182
           +H  P + + ++  S   SF IKE++SA GKG+GIPQSLRAFAR+ C  S +EL DL +E
Sbjct: 312 RHCPPKIGDVNSFSSMGNSFTIKEVKSARGKGRGIPQSLRAFARIFCCTSPQELSDLAVE 371

Query: 183 AVKTDGRVARRPLKDMSREIESHLFLLSQIEPLIRDYDASIEFLKIVNSRYIGGKFSLRK 362
           A + DGR+ARRPLK  +REI++H  LLS I  LI +Y+ SI+ L + +  Y    F+LRK
Sbjct: 372 AAQNDGRLARRPLKSWNREIQAHQVLLSWITRLINEYNTSIKSLPLASPLY--ETFALRK 429

Query: 363 QMAQDLLSGELRILKSASAWLENYCCILS 449
           QMA+DLL+GELR+LKSA AWLENYC  L+
Sbjct: 430 QMARDLLTGELRVLKSAGAWLENYCATLT 458


>ref|XP_002878015.1| SET domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297323853|gb|EFH54274.1| SET domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 473

 Score =  149 bits (377), Expect = 3e-34
 Identities = 80/160 (50%), Positives = 105/160 (65%), Gaps = 4/160 (2%)
 Frame = +3

Query: 6   HTVPIVTNTSTLDSCTKSFIIKEIRSAGGKGKGIPQSLRAFARVLCAASLEELKDLELEA 185
           H   IV + +   S   +F IKE++S  GKG+GIPQSLRAFARVLC    +EL DL  EA
Sbjct: 314 HHTRIVKDINIFHSSCDTFTIKEVKSTSGKGRGIPQSLRAFARVLCCTIPQELNDLSKEA 373

Query: 186 VKTDGRVARRPLKDMSREIESHLFLLSQIEPLIRDYDASIEFLKIVNSRYIGGKFSLRKQ 365
            K DGR+AR P KD SRE+E+H  LLS I  LI D+ A I+ L+     ++  +F++R++
Sbjct: 374 AKNDGRLARLPFKDRSRELEAHKILLSHINRLIEDHSACIKELEESKCYFVSQRFAVRRK 433

Query: 366 MAQDLLSGELRILKSASAWLENYCCIL----SKEIQQRSQ 473
           MA+DLL GELR+L+SA+ WL +YC  L    SK I Q  Q
Sbjct: 434 MAKDLLYGELRVLRSAAEWLNHYCTTLFSVTSKPILQSLQ 473


>ref|XP_004157308.1| PREDICTED: uncharacterized protein LOC101232234 [Cucumis sativus]
          Length = 177

 Score =  147 bits (371), Expect = 1e-33
 Identities = 73/131 (55%), Positives = 100/131 (76%)
 Frame = +3

Query: 45  SCTKSFIIKEIRSAGGKGKGIPQSLRAFARVLCAASLEELKDLELEAVKTDGRVARRPLK 224
           S   SF I+E+RSA GKG+G+PQSLRAFAR+L   + +EL DL  EAV  DGR+AR PLK
Sbjct: 44  STGNSFTIREVRSATGKGRGLPQSLRAFARILSCTNPQELNDLSSEAVNGDGRLARIPLK 103

Query: 225 DMSREIESHLFLLSQIEPLIRDYDASIEFLKIVNSRYIGGKFSLRKQMAQDLLSGELRIL 404
           ++ +E+E+H  LLSQ + L+ +Y+ASIE ++ V+S  +G K + R+ +AQ LL+GE+R+L
Sbjct: 104 NVYKEVEAHRILLSQFKQLVEEYNASIEAIEPVDSPCLGRKLARRRLLAQHLLTGEVRVL 163

Query: 405 KSASAWLENYC 437
           KSA AWLENYC
Sbjct: 164 KSAIAWLENYC 174