BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008451
         (808 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542122.1| PREDICTED: formamidopyrimidine-DNA glycosyla...    65   1e-08
ref|XP_003597926.1| Formamidopyrimidine-DNA glycosylase [Medicag...    63   9e-08
ref|XP_002263635.1| PREDICTED: formamidopyrimidine-DNA glycosyla...    60   6e-07
gb|AAC97952.1| putative formamidopyrimidine-DNA glycosylase 1 [A...    59   1e-06
ref|NP_564608.1| formamidopyrimidine-DNA glycosylase [Arabidopsi...    59   1e-06

>ref|XP_003542122.1| PREDICTED: formamidopyrimidine-DNA glycosylase-like [Glycine max]
          Length = 399

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 39/86 (45%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
 Frame = +3

Query: 3   GKAFVDGKRIEFITAGGRTTAYVPELQKLPKDQGVKNTSGQPKRXXXXXXXXXXXXXXXX 182
           GKAFVDGK+I+FITAGGRTTAYVPELQKL     VK T    KR                
Sbjct: 250 GKAFVDGKKIDFITAGGRTTAYVPELQKLSGSLDVKETGKPNKR---QASKKVRVDDDTE 306

Query: 183 NPKKNKLNNQGKTRAKDNTST-AKGK 257
            P   ++++ G  ++K  T   AKG+
Sbjct: 307 KPTNGEVDDLGSVKSKKGTKAGAKGR 332


>ref|XP_003597926.1| Formamidopyrimidine-DNA glycosylase [Medicago truncatula]
           gi|355486974|gb|AES68177.1| Formamidopyrimidine-DNA
           glycosylase [Medicago truncatula]
          Length = 424

 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 31/38 (81%), Positives = 32/38 (84%)
 Frame = +3

Query: 3   GKAFVDGKRIEFITAGGRTTAYVPELQKLPKDQGVKNT 116
           GKAFVDGK IEFITAGGRTTAYVPELQKL   Q +K T
Sbjct: 278 GKAFVDGKTIEFITAGGRTTAYVPELQKLSGSQVLKET 315


>ref|XP_002263635.1| PREDICTED: formamidopyrimidine-DNA glycosylase-like [Vitis
           vinifera]
          Length = 403

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 30/44 (68%), Positives = 36/44 (81%)
 Frame = +3

Query: 3   GKAFVDGKRIEFITAGGRTTAYVPELQKLPKDQGVKNTSGQPKR 134
           GKAFVDGK+I+FI+AGGRTTAYVPELQKL   Q  K  S +P++
Sbjct: 250 GKAFVDGKKIDFISAGGRTTAYVPELQKLSGTQAAK-ASVKPRK 292


>gb|AAC97952.1| putative formamidopyrimidine-DNA glycosylase 1 [Arabidopsis
           thaliana]
          Length = 390

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 29/44 (65%), Positives = 33/44 (75%)
 Frame = +3

Query: 3   GKAFVDGKRIEFITAGGRTTAYVPELQKLPKDQGVKNTSGQPKR 134
           GKAFVDGK+I+FITAGGRTTAYVPELQKL      K    +P +
Sbjct: 250 GKAFVDGKKIDFITAGGRTTAYVPELQKLYGKDAEKAAKVRPAK 293


>ref|NP_564608.1| formamidopyrimidine-DNA glycosylase [Arabidopsis thaliana]
           gi|5903053|gb|AAD55612.1|AC008016_22 Identical to
           gb|AB010690 mutM homologue-1 (formamidopyrimidine-DNA
           glycosylase 1) from Arabidopsis thaliana. EST gb|Z18192
           comes from this gene [Arabidopsis thaliana]
           gi|3550982|dbj|BAA32702.1| AtMMH-1 [Arabidopsis
           thaliana] gi|195947437|gb|ACG58696.1| At1g52500
           [Arabidopsis thaliana] gi|332194693|gb|AEE32814.1|
           formamidopyrimidine-DNA glycosylase [Arabidopsis
           thaliana]
          Length = 390

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 29/44 (65%), Positives = 33/44 (75%)
 Frame = +3

Query: 3   GKAFVDGKRIEFITAGGRTTAYVPELQKLPKDQGVKNTSGQPKR 134
           GKAFVDGK+I+FITAGGRTTAYVPELQKL      K    +P +
Sbjct: 250 GKAFVDGKKIDFITAGGRTTAYVPELQKLYGKDAEKAAKVRPAK 293