BLASTX nr result

ID: Coptis25_contig00008450 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008450
         (1354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284642.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   407   e-111
ref|XP_002529304.1| Desacetoxyvindoline 4-hydroxylase, putative ...   405   e-110
ref|XP_002284638.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   400   e-109
ref|XP_002315713.1| predicted protein [Populus trichocarpa] gi|2...   398   e-108
emb|CAN62402.1| hypothetical protein VITISV_000986 [Vitis vinifera]   397   e-108

>ref|XP_002284642.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1 [Vitis
            vinifera] gi|147807864|emb|CAN66433.1| hypothetical
            protein VITISV_027452 [Vitis vinifera]
          Length = 365

 Score =  407 bits (1047), Expect = e-111
 Identities = 196/348 (56%), Positives = 258/348 (74%), Gaps = 7/348 (2%)
 Frame = -3

Query: 1352 AFDETKAGVKGLVDSGLANIPKMFMIPANELKQNSDSNPTRFHIPMIDLQG------DRK 1191
            AFDE+K GVKGLVD+G++ +P+MF+ P + L+  +    T+F+ P++DLQG       R 
Sbjct: 22   AFDESKTGVKGLVDAGVSKVPRMFIQPPDNLRTYT----TQFNFPVVDLQGMDNDPIRRN 77

Query: 1190 KVVDEIKVASEKWGFFQVVNHGVPLSVLDEMIKGVIRFNEHDDEVRKQFYSRDR-KKRVR 1014
            K+VD +K ASE WGFF VVNHG+P+SVL+EM++GV+RF E D EV+KQFY+RD  +K++ 
Sbjct: 78   KIVDMVKDASETWGFFNVVNHGIPVSVLEEMMEGVLRFYEQDTEVKKQFYTRDASRKKMV 137

Query: 1013 FNSNFDLYTSKAANWRDTLTVEIFTPAPLDPNELPAACRDITIEYAKHVTTLGDAMFELL 834
            +NSNFDLYT+ AANWRDT    +  P P +P ELPAACRDI +EY   +  LG  +FEL+
Sbjct: 138  YNSNFDLYTAPAANWRDTFYC-LMAPHPPNPEELPAACRDILMEYKDQIMRLGFKLFELI 196

Query: 833  SEAIGLKADHLKQMNCNEACFLVSHYYPACPEPELTLGTTKHTDPSFLTILLQDHIGGLQ 654
            SEA+GL  +HLK M+C E   ++ HYYP+CP+PELT+GTTKH D  FLT+LLQD IGGLQ
Sbjct: 197  SEALGLNPNHLKDMDCTEGLSILCHYYPSCPQPELTMGTTKHADNDFLTVLLQDQIGGLQ 256

Query: 653  VLHQDHWVDVNPIPGALVINIGDFLQITSNDKLKSIEHRVRANHIGPRVSVACFLTRRFD 474
            VLHQ  W+DV P+PGALVIN+GD LQ+ +ND+ KS+EHRV ANHIGPRVSVACF +    
Sbjct: 257  VLHQGQWIDVPPMPGALVINVGDLLQLITNDRFKSVEHRVLANHIGPRVSVACFFSTSIQ 316

Query: 473  MAATPYGPIKELITVGEGPVYTEISAKEYLDHLNSQGLDGKSGLDAFK 330
             ++  YGPIKEL++    P Y E +  +Y+ + NS+GLDG S L  F+
Sbjct: 317  PSSKLYGPIKELLSEENPPKYKETTVGDYVAYFNSKGLDGTSALPHFR 364


>ref|XP_002529304.1| Desacetoxyvindoline 4-hydroxylase, putative [Ricinus communis]
            gi|223531228|gb|EEF33073.1| Desacetoxyvindoline
            4-hydroxylase, putative [Ricinus communis]
          Length = 363

 Score =  405 bits (1040), Expect = e-110
 Identities = 197/347 (56%), Positives = 254/347 (73%), Gaps = 6/347 (1%)
 Frame = -3

Query: 1352 AFDETKAGVKGLVDSGLANIPKMFMIPANELKQNSDSNPTRFHIPMIDLQG------DRK 1191
            AFD+TKAGVKGLVD+G+  IP++F    + L++NS +  T+F  P+IDL+        RK
Sbjct: 17   AFDDTKAGVKGLVDAGITKIPRIFYQSPDSLEKNSPTPDTKFRFPVIDLKDVEDGAVSRK 76

Query: 1190 KVVDEIKVASEKWGFFQVVNHGVPLSVLDEMIKGVIRFNEHDDEVRKQFYSRDRKKRVRF 1011
            ++VD ++ ASE WGFFQVVNHG+P SVL+EM  G+++F E D E++K FYSRD  K+V +
Sbjct: 77   EIVDGVRNASETWGFFQVVNHGIPASVLEEMKDGLLKFFEQDTELKKGFYSRDLTKKVGY 136

Query: 1010 NSNFDLYTSKAANWRDTLTVEIFTPAPLDPNELPAACRDITIEYAKHVTTLGDAMFELLS 831
            NSNFDLY++ AANWRDT+  ++  P P  P E+PAA R I +EY+K V  LG  +F+LLS
Sbjct: 137  NSNFDLYSAPAANWRDTIAFQM-VPDPPKPEEMPAAFRHILVEYSKEVRKLGSVLFDLLS 195

Query: 830  EAIGLKADHLKQMNCNEACFLVSHYYPACPEPELTLGTTKHTDPSFLTILLQDHIGGLQV 651
            EA+GLK +HLK M+C++  F++ HYYPACPEPELTLGT+KH D  FLT+LLQD IGGLQV
Sbjct: 196  EALGLKPNHLKDMDCDKGLFILGHYYPACPEPELTLGTSKHADNDFLTVLLQDDIGGLQV 255

Query: 650  LHQDHWVDVNPIPGALVINIGDFLQITSNDKLKSIEHRVRANHIGPRVSVACFLTRRFDM 471
            LHQ+ W DV P PGALV+NIGD LQ+ SNDK  S EHRV AN+ GPRVSVACF +     
Sbjct: 256  LHQNQWTDVPPTPGALVVNIGDLLQLISNDKFISAEHRVLANYKGPRVSVACFFSTALFP 315

Query: 470  AATPYGPIKELITVGEGPVYTEISAKEYLDHLNSQGLDGKSGLDAFK 330
             +  YGPIKEL++    P Y E + KE++ H N++GLDG S L  FK
Sbjct: 316  VSRLYGPIKELLSEENPPKYRETTVKEFVSHFNAKGLDGTSALLHFK 362


>ref|XP_002284638.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1 [Vitis
            vinifera]
          Length = 363

 Score =  400 bits (1029), Expect = e-109
 Identities = 199/347 (57%), Positives = 252/347 (72%), Gaps = 6/347 (1%)
 Frame = -3

Query: 1352 AFDETKAGVKGLVDSGLANIPKMFMIPANELKQNSDSNPTRFHIPMIDLQG------DRK 1191
            AFDE+K GVKGLVD+G++ +P+MF+ P +    NS    T+F  P+IDL G       RK
Sbjct: 21   AFDESKEGVKGLVDAGVSKVPRMFIRPPD----NSRDCNTQFKFPVIDLHGMDSDPIRRK 76

Query: 1190 KVVDEIKVASEKWGFFQVVNHGVPLSVLDEMIKGVIRFNEHDDEVRKQFYSRDRKKRVRF 1011
            K+V+ ++ ASE WG F VVNHG+P+SVL+EM+ GV RF E D+EV+K+FY+RD  ++V +
Sbjct: 77   KIVEMVREASETWGLFTVVNHGIPVSVLEEMMDGVHRFYEQDNEVKKEFYTRDLTRKVIY 136

Query: 1010 NSNFDLYTSKAANWRDTLTVEIFTPAPLDPNELPAACRDITIEYAKHVTTLGDAMFELLS 831
            NSNFDLY SKAANWRDT    +  P PL+P ELPA CRDI +EY + V  LG  + EL+S
Sbjct: 137  NSNFDLYVSKAANWRDTFYC-LMAPHPLNPQELPATCRDILMEYKEQVMRLGLKLLELMS 195

Query: 830  EAIGLKADHLKQMNCNEACFLVSHYYPACPEPELTLGTTKHTDPSFLTILLQDHIGGLQV 651
            EAIGL  +HLK M+C E   ++ HYYPACP+PELT+GTTKH+D  FLTILLQD IGGLQV
Sbjct: 196  EAIGLNPNHLKDMDCAEGLAILCHYYPACPQPELTMGTTKHSDNDFLTILLQDQIGGLQV 255

Query: 650  LHQDHWVDVNPIPGALVINIGDFLQITSNDKLKSIEHRVRANHIGPRVSVACFLTRRFDM 471
            LHQD WVDV P PGALVIN+GD LQ+ +ND+ KS+EHRV AN  GPRVSVACF +     
Sbjct: 256  LHQDQWVDVPPEPGALVINVGDLLQLITNDRFKSVEHRVLANRRGPRVSVACFFSTSHLP 315

Query: 470  AATPYGPIKELITVGEGPVYTEISAKEYLDHLNSQGLDGKSGLDAFK 330
            ++  YGPIKEL++    P Y E + ++Y+ H  S+GLDG S L  FK
Sbjct: 316  SSKLYGPIKELLSKENPPKYRETTVRDYVLHFRSKGLDGTSALPQFK 362


>ref|XP_002315713.1| predicted protein [Populus trichocarpa] gi|222864753|gb|EEF01884.1|
            predicted protein [Populus trichocarpa]
          Length = 379

 Score =  398 bits (1023), Expect = e-108
 Identities = 199/357 (55%), Positives = 257/357 (71%), Gaps = 16/357 (4%)
 Frame = -3

Query: 1352 AFDETKAGVKGLVDSGLANIPKMFMIPANELKQ---NSDSNPTRFHIPMIDLQG------ 1200
            AFDETKAGVKGLVD+G++ +P++F+ P+  L+    ++  NP   ++ +IDL+       
Sbjct: 25   AFDETKAGVKGLVDAGVSKVPQIFIHPSERLEHRTLSTSKNPV--NVTVIDLEAIDKDPI 82

Query: 1199 DRKKVVDEIKVASEKWGFFQVVNHGVPLSVLDEMIKGVIRFNEHDDEVRKQFYSRDRKKR 1020
             RK +VD+++ ASE WGFFQVVNHG+P+ VL+EM  GV RF E D EV+K+FY+RD  KR
Sbjct: 83   RRKGIVDKVRDASETWGFFQVVNHGIPVGVLEEMDAGVRRFFEQDVEVKKKFYTRDVTKR 142

Query: 1019 VRFNSNFDLYTSKAANWRDTLTVEIFTPAPLDPNELPAACRDITIEYAKHVTTLGDAMFE 840
              +NSNFDL+T+  ANWRDT       P P  P ELP ACRDI +E++K VT+LG ++F 
Sbjct: 143  FVYNSNFDLHTAPVANWRDTF-FSYMAPYPPKPEELPGACRDIMMEFSKQVTSLGISLFG 201

Query: 839  LLSEAIGLKADHLKQMNCNEACFLVSHYYPACPEPELTLGTTKHTDPSFLTILLQDHIGG 660
            LLSEA+GLK DHL++M+C E   L+SHYYPACPEPELTLGT+KH+D  FLT+LLQD IGG
Sbjct: 202  LLSEALGLKTDHLEKMDCAEGLALISHYYPACPEPELTLGTSKHSDNDFLTVLLQDQIGG 261

Query: 659  LQVLHQDHWVDVNPIPGALVINIGD-------FLQITSNDKLKSIEHRVRANHIGPRVSV 501
            LQ+LHQD WVD+ P+PGALVINIGD       F+ + SNDK KS+EHRV AN +GPR+SV
Sbjct: 262  LQMLHQDQWVDIPPVPGALVINIGDLMQASFSFISLISNDKFKSVEHRVLANRVGPRISV 321

Query: 500  ACFLTRRFDMAATPYGPIKELITVGEGPVYTEISAKEYLDHLNSQGLDGKSGLDAFK 330
            ACF +  F  ++  YGPIKEL++    P+Y E +  EYL +    GLDG S L  FK
Sbjct: 322  ACFFSTSFQPSSKLYGPIKELLSEYNPPIYRETTVNEYLSYFYDHGLDGTSPLIHFK 378


>emb|CAN62402.1| hypothetical protein VITISV_000986 [Vitis vinifera]
          Length = 367

 Score =  397 bits (1020), Expect = e-108
 Identities = 196/347 (56%), Positives = 253/347 (72%), Gaps = 6/347 (1%)
 Frame = -3

Query: 1352 AFDETKAGVKGLVDSGLANIPKMFMIPANELKQNSDSNPTRFHIPMIDLQ------GDRK 1191
            AFDETKAGVKGLVD+G++ +P++F+ P ++      +  T+F  P+IDLQ        RK
Sbjct: 25   AFDETKAGVKGLVDAGVSQVPRIFIQPPDDFT----TGDTKFSFPVIDLQDMNTDPARRK 80

Query: 1190 KVVDEIKVASEKWGFFQVVNHGVPLSVLDEMIKGVIRFNEHDDEVRKQFYSRDRKKRVRF 1011
            ++VD ++ ASE WGFF VVNHG+ ++VL+EM  GV RF E D EV+KQ+YSRD +++V +
Sbjct: 81   EIVDMVRDASETWGFFNVVNHGISVTVLEEMKDGVRRFYEQDTEVKKQYYSRDLERKVVY 140

Query: 1010 NSNFDLYTSKAANWRDTLTVEIFTPAPLDPNELPAACRDITIEYAKHVTTLGDAMFELLS 831
            NSNFDLY + AANWRDT    +  P P DP ELP A RDI IEY   V  LG  + EL+S
Sbjct: 141  NSNFDLYKAPAANWRDTFYF-LMAPQPPDPQELPPAFRDILIEYKDEVMKLGFKLLELIS 199

Query: 830  EAIGLKADHLKQMNCNEACFLVSHYYPACPEPELTLGTTKHTDPSFLTILLQDHIGGLQV 651
            EA+GLKA+HLK M+C E   ++ HYYPACP+PELT+GTTKH D  FLT+LLQD IGGLQV
Sbjct: 200  EALGLKANHLKDMDCAEGLAMLCHYYPACPQPELTMGTTKHADNDFLTVLLQDEIGGLQV 259

Query: 650  LHQDHWVDVNPIPGALVINIGDFLQITSNDKLKSIEHRVRANHIGPRVSVACFLTRRFDM 471
            LHQD WVDV P+PGALVINIGD LQ+ +ND+ KS+EHRV A+H GPRVSVACF +     
Sbjct: 260  LHQDQWVDVPPMPGALVINIGDLLQLITNDRFKSVEHRVLASHKGPRVSVACFFSTALLP 319

Query: 470  AATPYGPIKELITVGEGPVYTEISAKEYLDHLNSQGLDGKSGLDAFK 330
            +   YGPIKEL++    P Y EI+ ++++ + N++GLDG S L+ FK
Sbjct: 320  SLKLYGPIKELLSEENPPKYREITVRDFVAYFNAKGLDGTSALEHFK 366


Top