BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008448
         (518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACI32839.1| S locus F-box protein 1, partial [Prunus spinosa]...    94   1e-17
dbj|BAC65208.1| S locus F-box protein c [Prunus dulcis]                93   3e-17
dbj|BAG12294.1| S locus F-box protein with the low allelic seque...    93   3e-17
dbj|BAC65202.1| S-locus F-Box protein c [Prunus dulcis]                93   3e-17
gb|ABJ97531.1| S locus F-box protein, partial [Prunus webbii]          92   3e-17

>gb|ACI32839.1| S locus F-box protein 1, partial [Prunus spinosa]
           gi|208972576|gb|ACI32845.1| S locus F-box protein 1,
           partial [Prunus spinosa] gi|208972578|gb|ACI32846.1| S
           locus F-box protein 1, partial [Prunus spinosa]
          Length = 245

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 61/163 (37%), Positives = 83/163 (50%), Gaps = 23/163 (14%)
 Frame = +1

Query: 82  LESPKIIASCNGIICLQPDLSQNVSLWNPALREFRILPKPSVPPELVPDSGLGFYFGFGY 261
           +ESP I+  CNGI+CL P  S N+ L NPA++E ++LPK  +P      +  G   GFGY
Sbjct: 8   VESPSILGHCNGIVCLSP-CSDNLVLCNPAIKEIKLLPKSGLP------NWWGCAVGFGY 60

Query: 262 DAKTNDYKVVKVIFLN------LMTCRVDLYSLSTDSWRPI-------DTVVPFPYVFSH 402
           D K+ DYKV ++          +   RV++YSLSTDSWR I       DT   FP  F  
Sbjct: 61  DPKSKDYKVSRIATYQGEIDGLIPPPRVEIYSLSTDSWREIKNNSLETDTTCFFPDYFQ- 119

Query: 403 PKAPLRNGIYCWLG----------EDESERHAILSFDFTTEVF 501
                  GI  W+G          EDE ++  ++ FD   E+F
Sbjct: 120 ---MYFQGICYWVGYEQPKQSVEYEDEEQKPMVIFFDMGDEIF 159


>dbj|BAC65208.1| S locus F-box protein c [Prunus dulcis]
          Length = 409

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 61/163 (37%), Positives = 82/163 (50%), Gaps = 23/163 (14%)
 Frame = +1

Query: 82  LESPKIIASCNGIICLQPDLSQNVSLWNPALREFRILPKPSVPPELVPDSGLGFYFGFGY 261
           +ESP I+  CNGI+CL P  S N+ L NPA++E ++LPK  +P         G   GFGY
Sbjct: 112 VESPSILGHCNGIVCLSP-CSDNLVLCNPAIKEIKLLPKSGLP------DWWGCAVGFGY 164

Query: 262 DAKTNDYKVVKVIFLN------LMTCRVDLYSLSTDSWRPI-------DTVVPFPYVFSH 402
           D K+ DYKV ++          +   RV++YSLSTDSWR I       DT   FP  F  
Sbjct: 165 DPKSKDYKVSRIASYQVEIDGLIPPPRVEIYSLSTDSWREIKNNSLETDTTCFFPDYFQ- 223

Query: 403 PKAPLRNGIYCWLG----------EDESERHAILSFDFTTEVF 501
                  GI  W+G          EDE ++  ++ FD   E+F
Sbjct: 224 ---MYFQGICYWVGYEQPKQSVEYEDEEQKPMVIFFDTGDEIF 263


>dbj|BAG12294.1| S locus F-box protein with the low allelic sequence polymorphism
           1-S5 [Prunus avium]
          Length = 410

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 61/163 (37%), Positives = 82/163 (50%), Gaps = 23/163 (14%)
 Frame = +1

Query: 82  LESPKIIASCNGIICLQPDLSQNVSLWNPALREFRILPKPSVPPELVPDSGLGFYFGFGY 261
           +ESP I+  CNGI+CL P  S N+ L NPA++E ++LPK  +P         G   GFGY
Sbjct: 112 VESPSILGHCNGIVCLSP-CSDNLVLCNPAIKEIKLLPKSGLP------DWWGCAVGFGY 164

Query: 262 DAKTNDYKVVKVIFLN------LMTCRVDLYSLSTDSWRPI-------DTVVPFPYVFSH 402
           D K+ DYKV ++          +   RV++YSLSTDSWR I       DT   FP  F  
Sbjct: 165 DPKSKDYKVSRIATYQAEIDGLIPPPRVEIYSLSTDSWREIKNNSLETDTTCFFPDYFQ- 223

Query: 403 PKAPLRNGIYCWLG----------EDESERHAILSFDFTTEVF 501
                  GI  W+G          EDE ++  ++ FD   E+F
Sbjct: 224 ---MYFQGICYWVGYEQPKQSVEYEDEEQKPMVIFFDTGDEIF 263


>dbj|BAC65202.1| S-locus F-Box protein c [Prunus dulcis]
          Length = 325

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 61/163 (37%), Positives = 82/163 (50%), Gaps = 23/163 (14%)
 Frame = +1

Query: 82  LESPKIIASCNGIICLQPDLSQNVSLWNPALREFRILPKPSVPPELVPDSGLGFYFGFGY 261
           +ESP I+  CNGI+CL P  S N+ L NPA++E ++LPK  +P         G   GFGY
Sbjct: 28  VESPSILGHCNGIVCLSP-CSDNLVLCNPAIKEIKLLPKSGLP------DWWGCAVGFGY 80

Query: 262 DAKTNDYKVVKVIFLN------LMTCRVDLYSLSTDSWRPI-------DTVVPFPYVFSH 402
           D K+ DYKV ++          +   RV++YSLSTDSWR I       DT   FP  F  
Sbjct: 81  DPKSKDYKVSRIASYQVEIDGLIPPPRVEIYSLSTDSWREIKNNSLETDTTCFFPDYFQ- 139

Query: 403 PKAPLRNGIYCWLG----------EDESERHAILSFDFTTEVF 501
                  GI  W+G          EDE ++  ++ FD   E+F
Sbjct: 140 ---MYFQGICYWVGYEQPKQSVEYEDEEQKPMVIFFDTGDEIF 179


>gb|ABJ97531.1| S locus F-box protein, partial [Prunus webbii]
          Length = 368

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 61/168 (36%), Positives = 83/168 (49%), Gaps = 25/168 (14%)
 Frame = +1

Query: 82  LESPKIIASCNGIICLQPDLSQNVSLWNPALREFRILPKPSVPPELVPDSGLGFYFGFGY 261
           +ESP I+  CNGI+CL P  S N+ L NPA++E ++LPK  +P         G   GFGY
Sbjct: 80  VESPSILGHCNGIVCLSP-CSDNLVLCNPAIKEIKLLPKSGLP------DWWGCAVGFGY 132

Query: 262 DAKTNDYKVVKVIFLN--------LMTCRVDLYSLSTDSWRPI-------DTVVPFPYVF 396
           D K+ DYKV ++            +   RV++Y+LSTDSWR I       DT   FP  F
Sbjct: 133 DPKSKDYKVSRIASYQADIYGDGLIYPPRVEIYTLSTDSWREIRNNSLETDTTCFFPDYF 192

Query: 397 SHPKAPLRNGIYCWLG----------EDESERHAILSFDFTTEVFKTM 510
                    GI  W+G          EDE ++  +L FD   E+F  +
Sbjct: 193 Q----MYFQGICYWVGYEQPKQSVEYEDEEQKPMVLFFDTGDEIFHNL 236