BLASTX nr result
ID: Coptis25_contig00008440
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00008440
(989 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277104.1| PREDICTED: ATP-dependent Clp protease proteo... 214 e-100
ref|XP_002302770.1| predicted protein [Populus trichocarpa] gi|2... 209 4e-98
ref|NP_563657.1| ATP-dependent Clp protease, protease subunit [A... 207 4e-98
ref|XP_002889406.1| hypothetical protein ARALYDRAFT_887394 [Arab... 207 4e-98
gb|ABA41488.1| ATP-dependent Clp protease proteolytic subunit [C... 205 2e-97
>ref|XP_002277104.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 5,
chloroplastic isoform 1 [Vitis vinifera]
gi|297743987|emb|CBI36957.3| unnamed protein product
[Vitis vinifera]
Length = 289
Score = 214 bits (544), Expect(3) = e-100
Identities = 105/109 (96%), Positives = 107/109 (98%)
Frame = +2
Query: 428 SMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYH 607
SMGAFLLS GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYH
Sbjct: 181 SMGAFLLSCGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYH 240
Query: 608 TGQTLEKINQDTDRDFFMSAKEAKEYGLIDGVILNPLKALQPLPATADQ 754
TGQ+LEKINQDTDRDFFMSAKEAKEYGLIDGVILNPLKAL+PL ATADQ
Sbjct: 241 TGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVILNPLKALKPLVATADQ 289
Score = 105 bits (261), Expect(3) = e-100
Identities = 50/52 (96%), Positives = 51/52 (98%)
Frame = +3
Query: 3 QGPPPMVQERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAVDPTK 158
QGPPPMVQERFQSV+SQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAVDP K
Sbjct: 90 QGPPPMVQERFQSVVSQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAVDPDK 141
Score = 94.4 bits (233), Expect(3) = e-100
Identities = 46/46 (100%), Positives = 46/46 (100%)
Frame = +1
Query: 229 DIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLL 366
DIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLL
Sbjct: 142 DIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLL 187
>ref|XP_002302770.1| predicted protein [Populus trichocarpa] gi|222844496|gb|EEE82043.1|
predicted protein [Populus trichocarpa]
Length = 300
Score = 209 bits (531), Expect(3) = 4e-98
Identities = 101/109 (92%), Positives = 106/109 (97%)
Frame = +2
Query: 428 SMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYH 607
SMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQ+DIDIQANEMLHHKANLNGYL+YH
Sbjct: 191 SMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDIQANEMLHHKANLNGYLAYH 250
Query: 608 TGQTLEKINQDTDRDFFMSAKEAKEYGLIDGVILNPLKALQPLPATADQ 754
TGQ+LEKINQDTDRD+FMSAKEAK+YGLIDGVILNPLK LQPL A ADQ
Sbjct: 251 TGQSLEKINQDTDRDYFMSAKEAKDYGLIDGVILNPLKVLQPLAAAADQ 299
Score = 103 bits (258), Expect(3) = 4e-98
Identities = 50/52 (96%), Positives = 50/52 (96%)
Frame = +3
Query: 3 QGPPPMVQERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAVDPTK 158
QGPPPMV ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAVDP K
Sbjct: 100 QGPPPMVHERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAVDPNK 151
Score = 94.4 bits (233), Expect(3) = 4e-98
Identities = 46/46 (100%), Positives = 46/46 (100%)
Frame = +1
Query: 229 DIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLL 366
DIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLL
Sbjct: 152 DIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLL 197
>ref|NP_563657.1| ATP-dependent Clp protease, protease subunit [Arabidopsis thaliana]
gi|75313059|sp|Q9S834.1|CLPP5_ARATH RecName:
Full=ATP-dependent Clp protease proteolytic subunit 5,
chloroplastic; AltName: Full=Endopeptidase ClpP5;
Short=nClpP5; AltName: Full=nClpP1; Flags: Precursor
gi|9972387|gb|AAG10637.1|AC022521_15 ATP-dependent Clp
protease subunit ClpP [Arabidopsis thaliana]
gi|4887543|emb|CAB43488.1| ATP-dependent Clp protease
subunit ClpP [Arabidopsis thaliana]
gi|5360579|dbj|BAA82065.1| nClpP1 [Arabidopsis thaliana]
gi|21536639|gb|AAM60971.1| ATP-dependent Clp protease
proteolytic subunit ClpP5 [Arabidopsis thaliana]
gi|89274139|gb|ABD65590.1| At1g02560 [Arabidopsis
thaliana] gi|332189323|gb|AEE27444.1| ATP-dependent Clp
protease, protease subunit [Arabidopsis thaliana]
Length = 298
Score = 207 bits (528), Expect(3) = 4e-98
Identities = 101/105 (96%), Positives = 104/105 (99%)
Frame = +2
Query: 428 SMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYH 607
SMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYL+YH
Sbjct: 193 SMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYH 252
Query: 608 TGQTLEKINQDTDRDFFMSAKEAKEYGLIDGVILNPLKALQPLPA 742
TGQ+LEKINQDTDRDFFMSAKEAKEYGLIDGVI+NPLKALQPL A
Sbjct: 253 TGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAA 297
Score = 105 bits (261), Expect(3) = 4e-98
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = +3
Query: 3 QGPPPMVQERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAVDPTK 158
QGPPPMVQERFQS+ISQLFQ+RIIRCGGAVDDDMANIIVAQLLYLDAVDPTK
Sbjct: 102 QGPPPMVQERFQSIISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTK 153
Score = 94.4 bits (233), Expect(3) = 4e-98
Identities = 46/46 (100%), Positives = 46/46 (100%)
Frame = +1
Query: 229 DIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLL 366
DIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLL
Sbjct: 154 DIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLL 199
>ref|XP_002889406.1| hypothetical protein ARALYDRAFT_887394 [Arabidopsis lyrata subsp.
lyrata] gi|297335248|gb|EFH65665.1| hypothetical protein
ARALYDRAFT_887394 [Arabidopsis lyrata subsp. lyrata]
Length = 298
Score = 207 bits (528), Expect(3) = 4e-98
Identities = 101/105 (96%), Positives = 104/105 (99%)
Frame = +2
Query: 428 SMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYH 607
SMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYL+YH
Sbjct: 193 SMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYH 252
Query: 608 TGQTLEKINQDTDRDFFMSAKEAKEYGLIDGVILNPLKALQPLPA 742
TGQ+LEKINQDTDRDFFMSAKEAKEYGLIDGVI+NPLKALQPL A
Sbjct: 253 TGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAA 297
Score = 105 bits (261), Expect(3) = 4e-98
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = +3
Query: 3 QGPPPMVQERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAVDPTK 158
QGPPPMVQERFQS+ISQLFQ+RIIRCGGAVDDDMANIIVAQLLYLDAVDPTK
Sbjct: 102 QGPPPMVQERFQSIISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTK 153
Score = 94.4 bits (233), Expect(3) = 4e-98
Identities = 46/46 (100%), Positives = 46/46 (100%)
Frame = +1
Query: 229 DIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLL 366
DIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLL
Sbjct: 154 DIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLL 199
>gb|ABA41488.1| ATP-dependent Clp protease proteolytic subunit [Carica papaya]
Length = 306
Score = 205 bits (521), Expect(3) = 2e-97
Identities = 99/108 (91%), Positives = 105/108 (97%)
Frame = +2
Query: 428 SMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYH 607
SMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLN YL+YH
Sbjct: 192 SMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNSYLAYH 251
Query: 608 TGQTLEKINQDTDRDFFMSAKEAKEYGLIDGVILNPLKALQPLPATAD 751
TGQ+LE+INQDTDRDFFMSAKEAKEYGLIDGVI+NPLKALQPL A+ +
Sbjct: 252 TGQSLERINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLTASEE 299
Score = 105 bits (263), Expect(3) = 2e-97
Identities = 51/52 (98%), Positives = 51/52 (98%)
Frame = +3
Query: 3 QGPPPMVQERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAVDPTK 158
QGPPPMVQERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAVDP K
Sbjct: 101 QGPPPMVQERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAVDPNK 152
Score = 94.0 bits (232), Expect(3) = 2e-97
Identities = 45/46 (97%), Positives = 46/46 (100%)
Frame = +1
Query: 229 DIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLL 366
DIVMYVNSPGGSVTAGMA+FDTMRHIRPDVSTVCVGLAASMGAFLL
Sbjct: 153 DIVMYVNSPGGSVTAGMAVFDTMRHIRPDVSTVCVGLAASMGAFLL 198