BLASTX nr result
ID: Coptis25_contig00008429
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00008429
(2042 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283306.1| PREDICTED: putative E3 ubiquitin-protein lig... 446 e-122
emb|CAN71223.1| hypothetical protein VITISV_011730 [Vitis vinifera] 445 e-122
emb|CBI16457.3| unnamed protein product [Vitis vinifera] 434 e-119
ref|XP_002528126.1| hypothetical protein RCOM_0146510 [Ricinus c... 390 e-106
ref|XP_002304021.1| predicted protein [Populus trichocarpa] gi|2... 387 e-105
>ref|XP_002283306.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis
vinifera]
Length = 1148
Score = 446 bits (1146), Expect = e-122
Identities = 268/648 (41%), Positives = 367/648 (56%), Gaps = 21/648 (3%)
Frame = +1
Query: 148 SLQELLVEEXXXXXXXXXXXXXXXXXEGMSMPLYLYNEHTKLTSSSSAKIRTERSRSDIS 327
SL++LL EE +SMPLY + + K + S KI+T R+RS +S
Sbjct: 4 SLEDLLAEEGFQGRRLKTTPRPSFASRAVSMPLYPFRINCKADAGSVVKIQTARTRSSVS 63
Query: 328 RHTTGNEFTKTKGVRSQLPRESLLGKNRIVRGSNGKDPKEI-ETYEERHPNVLQEVERLN 504
R+ + E T V+ + ++SL+ + ++ R + KE+ + +EER N
Sbjct: 64 RYNSEGEAPPTNRVKGRKQKDSLIRREKLDR----EPKKELNKRFEERETN--------- 110
Query: 505 ARLSEDIPGNEMVNGRRLSDTPETQRFKDIYSNEVFEGESRTNGYSSGFXXXXXXXXXXX 684
+ ED PGNE+V E R+KDIYS++ + R++ S
Sbjct: 111 -DVFEDFPGNEIVE----VGVEENGRYKDIYSDKEYSPRKRSHKSSHRIVEKERNKERSE 165
Query: 685 XL----------MLGRSSFGSNSGKGLQKPASSSRKATKTLHSRK---------HPDMEK 807
+ + S +N +++P + ++ K++ + K H +
Sbjct: 166 KRNSSSTSSIKHLPAQKSLSNNHNNSMKEPHTFLNRSRKSMENNKIFDENRGQNHDSTVQ 225
Query: 808 SVREPALDEAAVKAAISILSGYIRRFLKDKEFRGSLRHGCLSCLVPTTPEESEHVDIKVI 987
+V EPALDE AV+A +SI+SG+++RFLKDK+FR L H C S L EE E KVI
Sbjct: 226 AVSEPALDEVAVQAMVSIISGFVKRFLKDKDFRTLLHHNCFSSLNIIDLEEGESTASKVI 285
Query: 988 VNLQEAIKTVERFTEETGDAKELKKASFQLSVITSLNTKELKDGFMSGIPNAQLSACAHL 1167
L++AI+TVE EE+ K+LKKAS QLSVI L++ ++KDGF SG+PN +LSACAHL
Sbjct: 286 TTLEQAIETVELVAEESASGKDLKKASLQLSVIAGLSSDDMKDGFTSGVPNYKLSACAHL 345
Query: 1168 YLSVVYNLQKKDKLSAKHLLQVFCDSPLQARTRLLPELWDVLFLPNLSHLKVWYDQEASS 1347
YL ++Y LQKKDK SAKH+LQVFCDSP QART LLPELWD LFLP LSHLKVWY+QEA S
Sbjct: 346 YLGLIYKLQKKDKASAKHILQVFCDSPFQARTMLLPELWDYLFLPQLSHLKVWYNQEADS 405
Query: 1348 IQDTXXXXXXXXXXEKVYNEILDSGTYQFAVYYKDWLTEGVETPSIPSIHVPSMSVLGFP 1527
+ D EKVYNEILD GT+QFA+YYKDWLTEGVE PS+PSIHVPS+SV G
Sbjct: 406 LADAPSRQRKLELLEKVYNEILDLGTHQFAIYYKDWLTEGVEAPSVPSIHVPSVSVRGVD 465
Query: 1528 KGSSHGHSPELASPVGSVSSQPLISKKLYDTVFGLSQKLXXXXXXXXXXXXXXFDNCASS 1707
+GSS H ELA+P+G S+QP++SKKLY+TVFG S + NC S
Sbjct: 466 QGSSQSHYQELANPLGPFSTQPMVSKKLYNTVFGNSIQPQVGEVEEYGEAEY---NCMRS 522
Query: 1708 FDGTADEDKRTVTCSPEQGRYIEENFHEQTTMNIATGAPHQADEFLPTSEEECQLH-KAF 1884
D +A EDK+ +T E ++ +++ E N A H D L +EE +LH +
Sbjct: 523 SDDSAVEDKQALTHFSEAVKHTDQHAKEHLMENPYDEAAHPEDGHLLEAEESTRLHGVSA 582
Query: 1885 PLEDNLKGEAQITPLWCTTLGSTNMLHVLPHKKANELILKKLAESVFE 2028
P E + E + + GS++M H P +ANE L+ LA SVF+
Sbjct: 583 PGERDPSDEVCDSHIRQVPPGSSHMFHA-PIHRANESTLRTLARSVFD 629
>emb|CAN71223.1| hypothetical protein VITISV_011730 [Vitis vinifera]
Length = 1148
Score = 445 bits (1145), Expect = e-122
Identities = 268/648 (41%), Positives = 367/648 (56%), Gaps = 21/648 (3%)
Frame = +1
Query: 148 SLQELLVEEXXXXXXXXXXXXXXXXXEGMSMPLYLYNEHTKLTSSSSAKIRTERSRSDIS 327
SL++LL EE +SMPLY + + K + S KI+T R+RS +S
Sbjct: 4 SLEDLLAEEGFQGRRLKTTPRPSFASRAVSMPLYPFRINCKADAGSVVKIQTARTRSSVS 63
Query: 328 RHTTGNEFTKTKGVRSQLPRESLLGKNRIVRGSNGKDPKEI-ETYEERHPNVLQEVERLN 504
R+ + E T V+ + ++SL+ + ++ R + KE+ + +EER N
Sbjct: 64 RYNSEGEAPPTDRVKGRKQKDSLIRREKLDR----EPKKELNKRFEERETN--------- 110
Query: 505 ARLSEDIPGNEMVNGRRLSDTPETQRFKDIYSNEVFEGESRTNGYSSGFXXXXXXXXXXX 684
+ ED PGNE+V E R+KDIYS++ + R++ S
Sbjct: 111 -DVFEDFPGNEIVE----VGVEENGRYKDIYSDKEYSPRKRSHKSSHRIVEKERNKERSE 165
Query: 685 XL----------MLGRSSFGSNSGKGLQKPASSSRKATKTLHSRK---------HPDMEK 807
+ + S +N +++P + ++ K++ + K H +
Sbjct: 166 KRNSSSTSSIKHLPAQKSLSNNHNNSMKEPHTFLNRSRKSMENNKIFDENRGQNHDSTVQ 225
Query: 808 SVREPALDEAAVKAAISILSGYIRRFLKDKEFRGSLRHGCLSCLVPTTPEESEHVDIKVI 987
+V EPALDE AV+A +SI+SG+++RFLKDK+FR L H C S L EE E KVI
Sbjct: 226 AVSEPALDEVAVQAMVSIISGFVKRFLKDKDFRTLLHHNCFSSLNIIDLEEGESTASKVI 285
Query: 988 VNLQEAIKTVERFTEETGDAKELKKASFQLSVITSLNTKELKDGFMSGIPNAQLSACAHL 1167
L++AI+TVE EE+ K+LKKAS QLSVI L++ ++KDGF SG+PN +LSACAHL
Sbjct: 286 TTLEQAIETVELVAEESASGKDLKKASLQLSVIAGLSSDDMKDGFTSGVPNYKLSACAHL 345
Query: 1168 YLSVVYNLQKKDKLSAKHLLQVFCDSPLQARTRLLPELWDVLFLPNLSHLKVWYDQEASS 1347
YL ++Y LQKKDK SAKH+LQVFCDSP QART LLPELWD LFLP LSHLKVWY+QEA S
Sbjct: 346 YLGLIYKLQKKDKASAKHILQVFCDSPFQARTMLLPELWDYLFLPQLSHLKVWYNQEADS 405
Query: 1348 IQDTXXXXXXXXXXEKVYNEILDSGTYQFAVYYKDWLTEGVETPSIPSIHVPSMSVLGFP 1527
+ D EKVYNEILD GT+QFA+YYKDWLTEGVE PS+PSIHVPS+SV G
Sbjct: 406 LADAPSRQRKLELLEKVYNEILDLGTHQFAIYYKDWLTEGVEAPSVPSIHVPSVSVRGVD 465
Query: 1528 KGSSHGHSPELASPVGSVSSQPLISKKLYDTVFGLSQKLXXXXXXXXXXXXXXFDNCASS 1707
+GSS H ELA+P+G S+QP++SKKLY+TVFG S + NC S
Sbjct: 466 QGSSQSHYQELANPLGPFSTQPMVSKKLYNTVFGNSIQPQVGEVEEYGEAEY---NCMRS 522
Query: 1708 FDGTADEDKRTVTCSPEQGRYIEENFHEQTTMNIATGAPHQADEFLPTSEEECQLH-KAF 1884
D +A EDK+ +T E ++ +++ E N A H D L +EE +LH +
Sbjct: 523 SDDSAVEDKQALTHFSEAVKHTDQHAKEHXMENPYDEAAHPEDGHLLEAEESTRLHGVSA 582
Query: 1885 PLEDNLKGEAQITPLWCTTLGSTNMLHVLPHKKANELILKKLAESVFE 2028
P E + E + + GS++M H P +ANE L+ LA SVF+
Sbjct: 583 PGERDPSDEVCDSHIRQVPPGSSHMFHA-PIHRANESTLRTLARSVFD 629
>emb|CBI16457.3| unnamed protein product [Vitis vinifera]
Length = 1084
Score = 434 bits (1116), Expect = e-119
Identities = 262/638 (41%), Positives = 358/638 (56%), Gaps = 11/638 (1%)
Frame = +1
Query: 148 SLQELLVEEXXXXXXXXXXXXXXXXXEGMSMPLYLYNEHTKLTSSSSAKIRTERSRSDIS 327
SL++LL EE +SMPLY + + K + S KI+T R+RS +S
Sbjct: 4 SLEDLLAEEGFQGRRLKTTPRPSFASRAVSMPLYPFRINCKADAGSVVKIQTARTRSSVS 63
Query: 328 RHTTGNEFTKTKGVRSQLPRESLLGKNRIVRGSNGKDPKEI-ETYEERHPNVLQEVERLN 504
R+ + E T V+ + ++SL+ + ++ R + KE+ + +EER N
Sbjct: 64 RYNSEGEAPPTNRVKGRKQKDSLIRREKLDR----EPKKELNKRFEERETN--------- 110
Query: 505 ARLSEDIPGNEMVNGRRLSDTPETQRFKDIYSNEVFEGESRTNGYSSGFXXXXXXXXXXX 684
+ ED PGNE+ + S E R + +S
Sbjct: 111 -DVFEDFPGNEIERNKERS-------------------EKRNSSSTSSIKH--------- 141
Query: 685 XLMLGRSSFGSNSGKGLQKPASSSRKATKTLHSRK---------HPDMEKSVREPALDEA 837
+ + S +N +++P + ++ K++ + K H ++V EPALDE
Sbjct: 142 --LPAQKSLSNNHNNSMKEPHTFLNRSRKSMENNKIFDENRGQNHDSTVQAVSEPALDEV 199
Query: 838 AVKAAISILSGYIRRFLKDKEFRGSLRHGCLSCLVPTTPEESEHVDIKVIVNLQEAIKTV 1017
AV+A +SI+SG+++RFLKDK+FR L H C S L EE E KVI L++AI+TV
Sbjct: 200 AVQAMVSIISGFVKRFLKDKDFRTLLHHNCFSSLNIIDLEEGESTASKVITTLEQAIETV 259
Query: 1018 ERFTEETGDAKELKKASFQLSVITSLNTKELKDGFMSGIPNAQLSACAHLYLSVVYNLQK 1197
E EE+ K+LKKAS QLSVI L++ ++KDGF SG+PN +LSACAHLYL ++Y LQK
Sbjct: 260 ELVAEESASGKDLKKASLQLSVIAGLSSDDMKDGFTSGVPNYKLSACAHLYLGLIYKLQK 319
Query: 1198 KDKLSAKHLLQVFCDSPLQARTRLLPELWDVLFLPNLSHLKVWYDQEASSIQDTXXXXXX 1377
KDK SAKH+LQVFCDSP QART LLPELWD LFLP LSHLKVWY+QEA S+ D
Sbjct: 320 KDKASAKHILQVFCDSPFQARTMLLPELWDYLFLPQLSHLKVWYNQEADSLADAPSRQRK 379
Query: 1378 XXXXEKVYNEILDSGTYQFAVYYKDWLTEGVETPSIPSIHVPSMSVLGFPKGSSHGHSPE 1557
EKVYNEILD GT+QFA+YYKDWLTEGVE PS+PSIHVPS+SV G +GSS H E
Sbjct: 380 LELLEKVYNEILDLGTHQFAIYYKDWLTEGVEAPSVPSIHVPSVSVRGVDQGSSQSHYQE 439
Query: 1558 LASPVGSVSSQPLISKKLYDTVFGLSQKLXXXXXXXXXXXXXXFDNCASSFDGTADEDKR 1737
LA+P+G S+QP++SKKLY+TVFG S + NC S D +A EDK+
Sbjct: 440 LANPLGPFSTQPMVSKKLYNTVFGNSIQPQVGEVEEYGEAEY---NCMRSSDDSAVEDKQ 496
Query: 1738 TVTCSPEQGRYIEENFHEQTTMNIATGAPHQADEFLPTSEEECQLH-KAFPLEDNLKGEA 1914
+T E ++ +++ E N A H D L +EE +LH + P E + E
Sbjct: 497 ALTHFSEAVKHTDQHAKEHLMENPYDEAAHPEDGHLLEAEESTRLHGVSAPGERDPSDEV 556
Query: 1915 QITPLWCTTLGSTNMLHVLPHKKANELILKKLAESVFE 2028
+ + GS++M H P +ANE L+ LA SVF+
Sbjct: 557 CDSHIRQVPPGSSHMFHA-PIHRANESTLRTLARSVFD 593
>ref|XP_002528126.1| hypothetical protein RCOM_0146510 [Ricinus communis]
gi|223532465|gb|EEF34256.1| hypothetical protein
RCOM_0146510 [Ricinus communis]
Length = 1050
Score = 390 bits (1001), Expect = e-106
Identities = 254/656 (38%), Positives = 352/656 (53%), Gaps = 25/656 (3%)
Frame = +1
Query: 136 MSSPSLQELLVEEXXXXXXXXXXXXXXXXXEGMSMPLYLYNEHTKLTSSSSAKIRTERSR 315
M+S SL+ELL EE + + LY + K S +++TER+R
Sbjct: 1 MASSSLEELLAEEGFRGRRSGMALRASFRADAVIKSLYPSRDKPKSDSPLGRRMKTERTR 60
Query: 316 SDISRHTTGNEFTKTKGVRSQLPRESLLGKNRIVRGSNGKDPKEIETYEERHPNVLQEVE 495
DISR+ + E + S+ PR++L + +I S + E
Sbjct: 61 FDISRYISRGESPRRDITSSRRPRDNLASREKIDGRSK-----------------IDSAE 103
Query: 496 RLNARLSEDIPGNEMVNGRRLSDTPETQ-------RFKDIYSNEVFEGESRTNGYSSGFX 654
RL R S D+ ++ N + + T+ KDIYS + + E R S G
Sbjct: 104 RLGRRDSNDVQNDKTHNSGEIEGSEITEVGAEGHEGVKDIYSVKAYNSE-RIEKSSQGNE 162
Query: 655 XXXXXXXXXXXLMLGRSSFGSNSGKGLQKPAS-----------SSRKATKTLHSRKHPDM 801
++ NS K L K + SS +++K + K +
Sbjct: 163 ESHRYLSRRGNNVIVDERHSRNSSKSLLKYTAFEDSSINPSYDSSVRSSKIVKRVKDDER 222
Query: 802 EK------SVREPALDEAAVKAAISILSGYIRRFLKDKEFRGSLRHGCLSCLVPTTPEES 963
+ +V + ALD+ AVKA +SIL+GYI+RFL+D+EFR +LRH C S L+ E
Sbjct: 223 TRCETASQAVSDIALDKVAVKAMVSILNGYIKRFLRDEEFRTTLRHNCFSSLMFNG--EG 280
Query: 964 EHVDIKVIVNLQEAIKTVERFTEETGDAKELKKASFQLSVITSLNTKELKDGFMSGIPNA 1143
+ + KVI NL++AI+TVE+ TEE K+LK+A+ QLSVITSLN+ +L+DG SGIPN
Sbjct: 281 DSIKSKVITNLEQAIETVEKATEEAASTKDLKRAALQLSVITSLNSNDLEDGHTSGIPNF 340
Query: 1144 QLSACAHLYLSVVYNLQKKDKLSAKHLLQVFCDSPLQARTRLLPELWDVLFLPNLSHLKV 1323
+LSACAHLY SV+Y LQKKD+ S+K+LLQVFCDSP ART LLPELWD LF P+LSH+K
Sbjct: 341 RLSACAHLYRSVIYKLQKKDRASSKYLLQVFCDSPFSARTILLPELWDFLFFPHLSHMKE 400
Query: 1324 WYDQEASSIQDTXXXXXXXXXXEKVYNEILDSGTYQFAVYYKDWLTEGVETPSIPSIHVP 1503
WY+QEA S+ +T +KVYNE LDSGTYQFAVYYKDWLTEGVE PS+P++H+P
Sbjct: 401 WYNQEADSLLNTPSKIKKLELLDKVYNETLDSGTYQFAVYYKDWLTEGVEAPSLPTLHIP 460
Query: 1504 SMSVLGFPKGSSHGHSPELASPVGSVSSQPLISKKLYDTVFGLSQKLXXXXXXXXXXXXX 1683
MSV + + HS L+ P S QP++SKKLY+ VF S +
Sbjct: 461 KMSVQEVEQLNPKDHSSGLSRPSDPFSPQPMVSKKLYEAVFSHSSR--PVSYEAEDGEAD 518
Query: 1684 XFDNCASSFDGTADEDKRTVTCSPEQGRYIEENFHEQTTMNIATGAPHQADEFLPTSEEE 1863
DN A+ DG+A E K+T+ SPE +Y++++ E + A L + +EE
Sbjct: 519 NLDNVATISDGSAYEVKQTIMDSPEIVKYLDQD-TENGSFKDAQDNTCLYHNGLTSEKEE 577
Query: 1864 CQLHK-AFPLEDNLKGEAQITPLWCTTLGSTNMLHVLPHKKANELILKKLAESVFE 2028
+L K + P E + E + + G ML+ H KANE IL LA+SV E
Sbjct: 578 WKLPKMSPPPESDCNYEIRSSNRQEERAGDDAMLNAFSHTKANESILMSLAKSVIE 633
>ref|XP_002304021.1| predicted protein [Populus trichocarpa] gi|222841453|gb|EEE79000.1|
predicted protein [Populus trichocarpa]
Length = 1159
Score = 387 bits (995), Expect = e-105
Identities = 256/661 (38%), Positives = 351/661 (53%), Gaps = 34/661 (5%)
Frame = +1
Query: 148 SLQELLVEEXXXXXXXXXXXXXXXXXEGMSMPLYLYNEHTKLTSSSSA---KIRTERSRS 318
SL+ELL +E E SMP Y + + K S S +I+TER+RS
Sbjct: 4 SLEELLAKEGFRGGRSGTRARPSFKAEAASMPRYPFGDQGKRDSPSGPSMRRIKTERTRS 63
Query: 319 DISRHTTGNEFTKTKGVRSQLPRESLLGKNRIV-------RGSNGKDPKEIETYEERHPN 477
D++R+T E + S+ PR+ L+ + ++ RG KD KE +T +
Sbjct: 64 DVTRYTLRGESPGSNSSLSRRPRDDLVKREKLDSRLKAEHRGRGSKDVKEDKTLK----- 118
Query: 478 VLQEVERLNARLSEDIPGNEMVNGRRLSDTPETQRFKDIYSNEVFEGESRTNGYSSGFXX 657
VE L ED+ G+E+V E + FKDI+S+ + E RT S G
Sbjct: 119 ----VETL-----EDVKGSEIVE----VGVEENETFKDIHSDIAYYSE-RTERSSKGNGS 164
Query: 658 XXXXXXXXXXLMLGRSSFGSNSGKGLQKPASSSRKATKTLHSRK---------------- 789
S S + L+K + S +++ +
Sbjct: 165 KERQREGKGKDKKVPERHHSISNENLEKHSEFSNDNRRSVDQSEAVYESSVRGSKIGNGF 224
Query: 790 ----HPDMEK---SVREPALDEAAVKAAISILSGYIRRFLKDKEFRGSLRHGCLSCLVPT 948
P +K +V E ALDE AVKA ISIL+GYI+RF KD EFR +LR C S L
Sbjct: 225 EDDQRPKNQKRAPAVPEIALDEVAVKAVISILNGYIKRFFKDAEFRTTLRQNCFSSLASI 284
Query: 949 TPEESEHVDIKVIVNLQEAIKTVERFTEETGDAKELKKASFQLSVITSLNTKELKDGFMS 1128
EE ++IK NL++AI+TVE+ E K+LK A+ LSVITSLN+ +LKD + S
Sbjct: 285 EIEEGNSIEIKAKANLEQAIETVEKAVEAAAGTKDLKTAALLLSVITSLNSNDLKDDYTS 344
Query: 1129 GIPNAQLSACAHLYLSVVYNLQKKDKLSAKHLLQVFCDSPLQARTRLLPELWDVLFLPNL 1308
G PN++LSACAH+YLSV+Y L+KKDK+SAKHLLQVFCDSP ART LL ELWD LF P+L
Sbjct: 345 GTPNSRLSACAHIYLSVIYKLRKKDKVSAKHLLQVFCDSPFLARTLLLSELWDYLFFPHL 404
Query: 1309 SHLKVWYDQEASSIQDTXXXXXXXXXXEKVYNEILDSGTYQFAVYYKDWLTEGVETPSIP 1488
SHLK WY +EA + +T +KVYNE+LDS TYQFAVYYKDWL EGVE PSIP
Sbjct: 405 SHLKTWYKKEADPLFNTASKITKLKFLDKVYNEVLDSCTYQFAVYYKDWLAEGVEAPSIP 464
Query: 1489 SIHVPSMSVLGFPKGSSHGHSPELASPVGSVSSQPLISKKLYDTVFGLSQKLXXXXXXXX 1668
S+++P +S +G + HS ASP QP++SKKLYD VFG S K
Sbjct: 465 SVNIPFIS----QQGGTQDHSSGPASPAAPFLPQPMVSKKLYDAVFGHSSK-PRVYDAEE 519
Query: 1669 XXXXXXFDNCASSFDGTADEDKRTVTCSPEQGRYIEENFHEQTTMNIATGAPHQADEFLP 1848
F+N A+S + + K+T+T S E +Y ++ + N+ + L
Sbjct: 520 NWKADNFNNGANSSGSSPIQVKQTLTSSSEMVKYPGQDIENHSPENLHDNTSILDNGLLS 579
Query: 1849 TSEEECQL-HKAFPLEDNLKGEAQITPLWCTTLGSTNMLHVLPHKKANELILKKLAESVF 2025
S+EE +L + + + +LK + + + + G T+ML+ H K NEL LK LA+SVF
Sbjct: 580 ASDEEWKLVNVSVSPDTDLKDDNRKSSAGQVSAGDTHMLNSSSHTKENELTLKTLAKSVF 639
Query: 2026 E 2028
+
Sbjct: 640 K 640