BLASTX nr result

ID: Coptis25_contig00008419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008419
         (1493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305504.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-06

>ref|XP_002305504.1| predicted protein [Populus trichocarpa] gi|222848468|gb|EEE86015.1|
           predicted protein [Populus trichocarpa]
          Length = 296

 Score = 58.5 bits (140), Expect = 4e-06
 Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
 Frame = -3

Query: 321 MGTTSDRLVFVMASRQHIRWSPTMDKILIELLLDHTVNGTGRTSNNRWESETLSMMARE- 145
           M  T D    V+  R    W+PT D  L+EL +D   +  GRT+ N +++E +  + R+ 
Sbjct: 1   MSATQD----VILGRPKAEWTPTRDAYLVELFIDQ--HNCGRTAYNEFKNEMIRSVTRDF 54

Query: 144 --RFNSSVGDETVRSRMKTLKRDYIAVKELLESTEFGFSYNQQTKCID 7
             RF+ ++ +  V++R   +K+DY  VK LL  + FG+  ++Q    D
Sbjct: 55  NKRFSMNLEESQVKNRYNVMKKDYGVVKTLLTHSGFGWDESRQMVVAD 102


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