BLASTX nr result

ID: Coptis25_contig00008405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008405
         (1019 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527313.1| golgi snare 11 protein, putative [Ricinus co...   338   1e-90
ref|XP_002285330.1| PREDICTED: Golgi SNARE 11 protein [Vitis vin...   330   4e-88
ref|XP_004152171.1| PREDICTED: Golgi SNAP receptor complex membe...   328   2e-87
ref|XP_002299264.1| predicted protein [Populus trichocarpa] gi|2...   319   6e-85
ref|XP_002303840.1| predicted protein [Populus trichocarpa] gi|2...   315   1e-83

>ref|XP_002527313.1| golgi snare 11 protein, putative [Ricinus communis]
           gi|223533313|gb|EEF35065.1| golgi snare 11 protein,
           putative [Ricinus communis]
          Length = 253

 Score =  338 bits (867), Expect = 1e-90
 Identities = 174/226 (76%), Positives = 193/226 (85%), Gaps = 4/226 (1%)
 Frame = +3

Query: 192 MDLPSSWDALRNQARKLEAQLDEQMNSYRKFVASK----VDGTESEVEAGIDRLIKQLQL 359
           MD PSSWDALR QARKLEAQLDEQMNSYRK V+SK    VD  E+++E+G+DRL+KQLQ 
Sbjct: 1   MDAPSSWDALRKQARKLEAQLDEQMNSYRKLVSSKGSIKVDAAENDLESGVDRLLKQLQQ 60

Query: 360 VISQMQSWVSAAGSEVFSHTVTRHQEILQDLAQEFHRLRSSLRAKQEHASLLQDFMEFDR 539
           V SQMQ+WVS+ GSE+ SHT+TRHQEILQDL QEFHRLRSSLRAKQEHASLL+DF EFDR
Sbjct: 61  VNSQMQAWVSSGGSEMVSHTLTRHQEILQDLTQEFHRLRSSLRAKQEHASLLEDFREFDR 120

Query: 540 SRLDLEDGGGSVEQALLKEHASISRTTGQMDNVVSQAQATLGTLVFQRSTFGGXXXXXXX 719
           +RLDLEDG GS EQALL+EHASI R TGQMDNV+SQAQATLG LV QRSTFGG       
Sbjct: 121 TRLDLEDGVGSTEQALLREHASIGRNTGQMDNVISQAQATLGALVLQRSTFGGINSKLSN 180

Query: 720 XXXRLPTVNHLLSSIKRKKSMDTIILSLVASVCTFLILIYWLSK*K 857
              RLPTVNH+L++IKRKKSMDTIILSLVASVCTFLI IYWL+K K
Sbjct: 181 VSSRLPTVNHILTAIKRKKSMDTIILSLVASVCTFLIFIYWLTKDK 226


>ref|XP_002285330.1| PREDICTED: Golgi SNARE 11 protein [Vitis vinifera]
           gi|296082080|emb|CBI21085.3| unnamed protein product
           [Vitis vinifera]
          Length = 220

 Score =  330 bits (845), Expect = 4e-88
 Identities = 171/221 (77%), Positives = 193/221 (87%), Gaps = 1/221 (0%)
 Frame = +3

Query: 192 MDLPSSWDALRNQARKLEAQLDEQMNSYRKFVASKVDGT-ESEVEAGIDRLIKQLQLVIS 368
           MD PSSWDALR QARKLEAQLDEQM+ YRK V+ KVDG  E E+++GID+L+KQLQ V S
Sbjct: 1   MDPPSSWDALRKQARKLEAQLDEQMHLYRKLVSMKVDGDKEKEIDSGIDQLLKQLQQVNS 60

Query: 369 QMQSWVSAAGSEVFSHTVTRHQEILQDLAQEFHRLRSSLRAKQEHASLLQDFMEFDRSRL 548
            MQ+WVS+ GSE+FSHT+TRHQEILQDL QEF+RLRSS RAK+EHASLL+DF EFDRSRL
Sbjct: 61  HMQAWVSSGGSEIFSHTLTRHQEILQDLTQEFYRLRSSFRAKKEHASLLEDFREFDRSRL 120

Query: 549 DLEDGGGSVEQALLKEHASISRTTGQMDNVVSQAQATLGTLVFQRSTFGGXXXXXXXXXX 728
           DLE+GGGS EQALLKEHASISR+TGQMD V+SQAQATLG LVFQRSTFGG          
Sbjct: 121 DLEEGGGS-EQALLKEHASISRSTGQMDTVISQAQATLGALVFQRSTFGGINSKLSNVSS 179

Query: 729 RLPTVNHLLSSIKRKKSMDTIILSLVASVCTFLILIYWLSK 851
           RLPTVN++LS+IKRKKS+DTIILSLVASVCTFLILIYWL+K
Sbjct: 180 RLPTVNNILSAIKRKKSLDTIILSLVASVCTFLILIYWLTK 220


>ref|XP_004152171.1| PREDICTED: Golgi SNAP receptor complex member 1-1-like [Cucumis
           sativus] gi|449484796|ref|XP_004156982.1| PREDICTED:
           Golgi SNAP receptor complex member 1-1-like [Cucumis
           sativus]
          Length = 228

 Score =  328 bits (840), Expect = 2e-87
 Identities = 166/225 (73%), Positives = 194/225 (86%), Gaps = 4/225 (1%)
 Frame = +3

Query: 189 SMDLPSSWDALRNQARKLEAQLDEQMNSYRKFVASK----VDGTESEVEAGIDRLIKQLQ 356
           SM++PSSWDALR QARKLEAQLDEQMNS+RK V++K    V+  +S++E+GI+RL+KQLQ
Sbjct: 4   SMEIPSSWDALRKQARKLEAQLDEQMNSFRKLVSTKGSTNVETADSDIESGIERLLKQLQ 63

Query: 357 LVISQMQSWVSAAGSEVFSHTVTRHQEILQDLAQEFHRLRSSLRAKQEHASLLQDFMEFD 536
            V SQMQ+WVS+ GSE+ SHT+TRHQEILQDL QEF+RLRSSLRAKQEHASLL DF EFD
Sbjct: 64  QVNSQMQAWVSSGGSEMVSHTLTRHQEILQDLTQEFYRLRSSLRAKQEHASLLDDFREFD 123

Query: 537 RSRLDLEDGGGSVEQALLKEHASISRTTGQMDNVVSQAQATLGTLVFQRSTFGGXXXXXX 716
           RSRL+LEDG G+ EQ LLKEHA+I R+TGQMDNV+SQAQATLG LVFQRSTFGG      
Sbjct: 124 RSRLELEDGLGTAEQTLLKEHATIGRSTGQMDNVISQAQATLGALVFQRSTFGGINSKLS 183

Query: 717 XXXXRLPTVNHLLSSIKRKKSMDTIILSLVASVCTFLILIYWLSK 851
               RLP+VNH+L++IKRKKSMDTIILSLVAS+CTFLI IYWL+K
Sbjct: 184 NVSSRLPSVNHILAAIKRKKSMDTIILSLVASICTFLIFIYWLTK 228


>ref|XP_002299264.1| predicted protein [Populus trichocarpa] gi|222846522|gb|EEE84069.1|
           predicted protein [Populus trichocarpa]
          Length = 226

 Score =  319 bits (818), Expect = 6e-85
 Identities = 164/220 (74%), Positives = 186/220 (84%), Gaps = 4/220 (1%)
 Frame = +3

Query: 204 SSWDALRNQARKLEAQLDEQMNSYRKFVASK----VDGTESEVEAGIDRLIKQLQLVISQ 371
           SSWDALR QARKLEAQLDEQMNSYRK  +SK    VD  E++ E+GIDRL+KQLQ V SQ
Sbjct: 7   SSWDALRKQARKLEAQLDEQMNSYRKLASSKGSTKVDSAENDPESGIDRLLKQLQQVNSQ 66

Query: 372 MQSWVSAAGSEVFSHTVTRHQEILQDLAQEFHRLRSSLRAKQEHASLLQDFMEFDRSRLD 551
           MQ+WVS+ GSE+ SHT+TRHQEILQDL QEFHRLRS +RAKQEHA LL+DF EFDR+RLD
Sbjct: 67  MQAWVSSGGSEMVSHTLTRHQEILQDLTQEFHRLRSGMRAKQEHALLLEDFREFDRTRLD 126

Query: 552 LEDGGGSVEQALLKEHASISRTTGQMDNVVSQAQATLGTLVFQRSTFGGXXXXXXXXXXR 731
           LEDG GS +QALL+EHASISR TGQMDNV+SQAQATLG+LV QRSTFGG          R
Sbjct: 127 LEDGVGSADQALLREHASISRNTGQMDNVISQAQATLGSLVLQRSTFGGINSKLSNVSSR 186

Query: 732 LPTVNHLLSSIKRKKSMDTIILSLVASVCTFLILIYWLSK 851
           LPTVN +LS+IKR+KSMD+IILSLVASVCTFLI IYW++K
Sbjct: 187 LPTVNQILSAIKRRKSMDSIILSLVASVCTFLIFIYWVTK 226


>ref|XP_002303840.1| predicted protein [Populus trichocarpa] gi|222841272|gb|EEE78819.1|
           predicted protein [Populus trichocarpa]
          Length = 228

 Score =  315 bits (806), Expect = 1e-83
 Identities = 162/220 (73%), Positives = 185/220 (84%), Gaps = 4/220 (1%)
 Frame = +3

Query: 204 SSWDALRNQARKLEAQLDEQMNSYRKFVASK----VDGTESEVEAGIDRLIKQLQLVISQ 371
           SSWDALR QARKLEAQLDEQM+++RK  +SK    VD  E+++E+GIDRL+KQLQ V SQ
Sbjct: 9   SSWDALRKQARKLEAQLDEQMSTFRKLASSKGSTKVDFPENDLESGIDRLLKQLQQVNSQ 68

Query: 372 MQSWVSAAGSEVFSHTVTRHQEILQDLAQEFHRLRSSLRAKQEHASLLQDFMEFDRSRLD 551
           MQ+WVS+ GSE+ SHT+TRHQEILQDL QEFHRLRS +RAKQEHA LL+DF EFDR+RLD
Sbjct: 69  MQAWVSSGGSEMVSHTLTRHQEILQDLTQEFHRLRSGMRAKQEHALLLEDFREFDRTRLD 128

Query: 552 LEDGGGSVEQALLKEHASISRTTGQMDNVVSQAQATLGTLVFQRSTFGGXXXXXXXXXXR 731
           LEDG GS +QALL+EHASISR TGQMDNV+SQAQ+TLG LV QRSTFGG          R
Sbjct: 129 LEDGVGSADQALLREHASISRNTGQMDNVISQAQSTLGALVLQRSTFGGINSKLSNVSSR 188

Query: 732 LPTVNHLLSSIKRKKSMDTIILSLVASVCTFLILIYWLSK 851
           LPTVN +LS+IKRKKSMD IILSLVASVCTFLI IYWL+K
Sbjct: 189 LPTVNQILSAIKRKKSMDAIILSLVASVCTFLIFIYWLTK 228


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