BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008404
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...    58   9e-07
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...    55   8e-06

>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 25/54 (46%), Positives = 37/54 (68%)
 Frame = +2

Query: 41  NGGRNTRFFHLSTIYRRRKNKIEKLKKNNGSWSLERAEVVANISFYFKDIFSSE 202
           +G RNTR+FHLST+ RR +N+I+ L+ N+G W     EV A +  Y+K +FS +
Sbjct: 353 DGDRNTRYFHLSTVIRRSRNRIDMLQNNDGEWISNPMEVKAMVLGYWKHLFSED 406


>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1231

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/53 (47%), Positives = 35/53 (66%)
 Frame = +2

Query: 44  GGRNTRFFHLSTIYRRRKNKIEKLKKNNGSWSLERAEVVANISFYFKDIFSSE 202
           G RNT FFH STI RRR+N+IE LK ++  W  ++ E+ A    Y+K ++S E
Sbjct: 211 GDRNTTFFHTSTIIRRRRNRIESLKGDDDRWVTDKVELEAMALTYYKRLYSLE 263