BLASTX nr result
ID: Coptis25_contig00008401
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00008401
(2138 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285583.1| PREDICTED: glutamyl-tRNA reductase 1, chloro... 645 0.0
ref|XP_004148403.1| PREDICTED: glutamyl-tRNA reductase 1, chloro... 647 0.0
ref|XP_004167725.1| PREDICTED: LOW QUALITY PROTEIN: glutamyl-tRN... 645 0.0
ref|XP_002509995.1| Glutamyl-tRNA reductase 1, chloroplast precu... 631 0.0
gb|AAD16897.1| glutamyl-tRNA reductase precursor [Glycine max] 623 0.0
>ref|XP_002285583.1| PREDICTED: glutamyl-tRNA reductase 1, chloroplastic [Vitis vinifera]
gi|147816412|emb|CAN77439.1| hypothetical protein
VITISV_007402 [Vitis vinifera]
Length = 545
Score = 645 bits (1665), Expect(2) = 0.0
Identities = 332/419 (79%), Positives = 365/419 (87%)
Frame = +3
Query: 540 GELCGLNHIEEAGVLSTCNRMEIYVVALSWHRGVRELTEWMAKTSGIPASELRHHLFMLR 719
GELC LNHIEEA VLSTCNRMEIYVVALS HRGV+E+TEWM+KTSG+P SEL HH F+L
Sbjct: 127 GELCNLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKTSGVPVSELCHHRFLLY 186
Query: 720 DGDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKSGEGVNGFGRNISGLFKHAITVGKRV 899
+ DATQHLFEVSAGLDSLVLGEGQILAQVKQVVK G+GV GFGRNISGLFKHAITVGKRV
Sbjct: 187 NKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAITVGKRV 246
Query: 900 RTETNIXXXXXXXXXXXXELAIMKLPQNSSATARVLVVGAGKMGKLVIKHLVAKGWTKIV 1079
RTETNI ELA+MKLP++S ATAR+LV+GAGKMGKLVIKHLVAKG TK+V
Sbjct: 247 RTETNIAAGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMV 306
Query: 1080 VVNRSEERVEAIREEMRDIEIIYKPLTEMLACAGESDVVFTSTASETLLFTKENVETLPP 1259
+VNR EERV AIREEM+D+EIIY+PLTEMLACA E+DVVFTSTASET LF KE+V+ LP
Sbjct: 307 IVNRGEERVAAIREEMKDVEIIYRPLTEMLACAAEADVVFTSTASETPLFLKEHVKDLPA 366
Query: 1260 VGSINGVSRLFVDISVPRNVGSCVSDVENTRVYNVDDLKEVVAANKEDRNRKAMEAQVII 1439
VG G RLFVDISVPRNVG+CVSD+E RVYNVDDLKEVVAANKEDR RKAMEAQ II
Sbjct: 367 VGQDVGGLRLFVDISVPRNVGACVSDLETARVYNVDDLKEVVAANKEDRLRKAMEAQAII 426
Query: 1440 TEESKQFGAWRDSLETVPTIKKLRALVEGIRMTELERCFSKIGDDIPKKTRAAIEGLSRG 1619
TEESKQF AWRDSLETVPTIKKLRA E IR+ ELE+C SK+GDDI KKTR A++ LSRG
Sbjct: 427 TEESKQFEAWRDSLETVPTIKKLRAYAERIRVAELEKCLSKMGDDISKKTRRAVDDLSRG 486
Query: 1620 MMNKVLHGPMQHLRCDGSDCSQLSETLENMHALNRMFSLETEASVLGQKVRAKVEQSQK 1796
++NK+LHGPMQHLRCDGSD LSETLENMHALNRMFSLETE S+L QK+RAKVEQ+QK
Sbjct: 487 IVNKLLHGPMQHLRCDGSDSRTLSETLENMHALNRMFSLETEISLLEQKIRAKVEQTQK 545
Score = 122 bits (306), Expect(2) = 0.0
Identities = 68/100 (68%), Positives = 77/100 (77%), Gaps = 8/100 (8%)
Frame = +2
Query: 176 SSCSSYSQFRIICKPKRT--FLFRRGGV--TRCEAVSD----NNNTRVSSLSALEQLKAS 331
SS S SQ+RI CKP RT L +RG +RCE SD ++TR SS+SALEQLK S
Sbjct: 26 SSSRSSSQYRIFCKPARTRRSLIQRGASLNSRCEVASDALVDTDSTRSSSVSALEQLKTS 85
Query: 332 GADRYTKEKSSIIVLGLSIHTTPVEMREKLAIPEAEWPRA 451
ADRYTKE+SSI+V+GLSIHTTPVEMREKLAIPEAEWPRA
Sbjct: 86 AADRYTKERSSIVVIGLSIHTTPVEMREKLAIPEAEWPRA 125
>ref|XP_004148403.1| PREDICTED: glutamyl-tRNA reductase 1, chloroplastic-like [Cucumis
sativus] gi|2495155|sp|P93111.1|HEM11_CUCSA RecName:
Full=Glutamyl-tRNA reductase 1, chloroplastic;
Short=GluTR; Flags: Precursor gi|1694926|dbj|BAA08910.1|
glutamyl-tRNA reductase [Cucumis sativus]
Length = 552
Score = 647 bits (1670), Expect(2) = 0.0
Identities = 330/419 (78%), Positives = 367/419 (87%)
Frame = +3
Query: 540 GELCGLNHIEEAGVLSTCNRMEIYVVALSWHRGVRELTEWMAKTSGIPASELRHHLFMLR 719
GELCGLNHIEEA VLSTCNRMEIYVVALS HRGV+E+TEWM+KTSGIP SE+ H F+L
Sbjct: 134 GELCGLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKTSGIPVSEICQHRFLLY 193
Query: 720 DGDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKSGEGVNGFGRNISGLFKHAITVGKRV 899
+ DATQH+FEVSAGLDSLVLGEGQILAQVKQVVK G+GV GFGRNISGLFKHAITVGKRV
Sbjct: 194 NNDATQHIFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVAGFGRNISGLFKHAITVGKRV 253
Query: 900 RTETNIXXXXXXXXXXXXELAIMKLPQNSSATARVLVVGAGKMGKLVIKHLVAKGWTKIV 1079
RTETNI ELA+MKLP+ S ATAR+LV+GAGKMGKLVIKHLVAKG TK+V
Sbjct: 254 RTETNIAAGAVSVSSAAVELALMKLPEPSHATARMLVIGAGKMGKLVIKHLVAKGCTKMV 313
Query: 1080 VVNRSEERVEAIREEMRDIEIIYKPLTEMLACAGESDVVFTSTASETLLFTKENVETLPP 1259
VVNRSEERV AIREEM+D+EIIYKPLTEML+C E+DV+FTSTASE+LLFTKE V+ LPP
Sbjct: 314 VVNRSEERVTAIREEMKDVEIIYKPLTEMLSCTAEADVIFTSTASESLLFTKEQVKDLPP 373
Query: 1260 VGSINGVSRLFVDISVPRNVGSCVSDVENTRVYNVDDLKEVVAANKEDRNRKAMEAQVII 1439
VG G RLF+DISVPRNVG+C++++E+ RVYNVDDLKEVVAANKEDR RKAMEAQ II
Sbjct: 374 VGHDVGGLRLFIDISVPRNVGACINNLEDVRVYNVDDLKEVVAANKEDRLRKAMEAQSII 433
Query: 1440 TEESKQFGAWRDSLETVPTIKKLRALVEGIRMTELERCFSKIGDDIPKKTRAAIEGLSRG 1619
TEESKQF AWRDSLETVPTIKKLRA E IR ELE+C SK+GDDIPKKTR A++ LSRG
Sbjct: 434 TEESKQFEAWRDSLETVPTIKKLRAYAERIRTAELEKCLSKMGDDIPKKTRRAVDDLSRG 493
Query: 1620 MMNKVLHGPMQHLRCDGSDCSQLSETLENMHALNRMFSLETEASVLGQKVRAKVEQSQK 1796
++NK+LHGPMQHLRCDGSD LSETLENMHALNRMFSLETE +VL QK+RAKVEQ+QK
Sbjct: 494 IVNKLLHGPMQHLRCDGSDSRTLSETLENMHALNRMFSLETEIAVLEQKIRAKVEQNQK 552
Score = 100 bits (248), Expect(2) = 0.0
Identities = 63/125 (50%), Positives = 79/125 (63%), Gaps = 23/125 (18%)
Frame = +2
Query: 146 SMAAVKTMMESSCSSYSQFRII--------CKPKRT--FLFRRGGVT-----RCEAVSDN 280
S A ++ ++ S S+ S R + CK RT LF+R GV+ +CE S +
Sbjct: 8 SGAKLEALLFKSASNSSSTRNLSSSHLPGFCKSIRTRRILFQRTGVSSFTPFKCELASSD 67
Query: 281 --------NNTRVSSLSALEQLKASGADRYTKEKSSIIVLGLSIHTTPVEMREKLAIPEA 436
+ + S+LSALEQLK S DRYTKE+SSI+V+GLSIHTTPVEMREKLAIPEA
Sbjct: 68 VLVQNDEIDPPKSSNLSALEQLKTSAVDRYTKERSSIVVIGLSIHTTPVEMREKLAIPEA 127
Query: 437 EWPRA 451
EWPRA
Sbjct: 128 EWPRA 132
>ref|XP_004167725.1| PREDICTED: LOW QUALITY PROTEIN: glutamyl-tRNA reductase 1,
chloroplastic-like [Cucumis sativus]
Length = 552
Score = 645 bits (1664), Expect(2) = 0.0
Identities = 329/419 (78%), Positives = 366/419 (87%)
Frame = +3
Query: 540 GELCGLNHIEEAGVLSTCNRMEIYVVALSWHRGVRELTEWMAKTSGIPASELRHHLFMLR 719
GELCGLNHIEEA VLSTCNRMEIYVVALS HRGV+E+TEWM+KTSGIP SE+ H F+L
Sbjct: 134 GELCGLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKTSGIPVSEICQHRFLLY 193
Query: 720 DGDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKSGEGVNGFGRNISGLFKHAITVGKRV 899
+ DATQH+FEVSAGLDSLVLGEGQILAQVKQVVK G+GV GFGRNISGLFKHAITVGKRV
Sbjct: 194 NNDATQHIFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVAGFGRNISGLFKHAITVGKRV 253
Query: 900 RTETNIXXXXXXXXXXXXELAIMKLPQNSSATARVLVVGAGKMGKLVIKHLVAKGWTKIV 1079
RTETNI ELA+MKLP+ S ATAR+LV+GAGKMGKLVIKHLVAKG TK+V
Sbjct: 254 RTETNIAAGAVSVSSAAVELALMKLPEPSHATARMLVIGAGKMGKLVIKHLVAKGCTKMV 313
Query: 1080 VVNRSEERVEAIREEMRDIEIIYKPLTEMLACAGESDVVFTSTASETLLFTKENVETLPP 1259
VVNRSEERV AIREEM+D+EIIYKPLTEML+C E+DV+FTSTASE+LLFTKE V+ LPP
Sbjct: 314 VVNRSEERVTAIREEMKDVEIIYKPLTEMLSCTAEADVIFTSTASESLLFTKEQVKDLPP 373
Query: 1260 VGSINGVSRLFVDISVPRNVGSCVSDVENTRVYNVDDLKEVVAANKEDRNRKAMEAQVII 1439
VG G RLF+DISVPRNVG+C++++E+ RVYNVDDLKEVVAANKEDR RKAMEAQ II
Sbjct: 374 VGHDVGGLRLFIDISVPRNVGACINNLEDVRVYNVDDLKEVVAANKEDRLRKAMEAQSII 433
Query: 1440 TEESKQFGAWRDSLETVPTIKKLRALVEGIRMTELERCFSKIGDDIPKKTRAAIEGLSRG 1619
TEESKQF AWRDSLETVPTI KLRA E IR ELE+C SK+GDDIPKKTR A++ LSRG
Sbjct: 434 TEESKQFEAWRDSLETVPTIXKLRAYAERIRTAELEKCLSKMGDDIPKKTRRAVDDLSRG 493
Query: 1620 MMNKVLHGPMQHLRCDGSDCSQLSETLENMHALNRMFSLETEASVLGQKVRAKVEQSQK 1796
++NK+LHGPMQHLRCDGSD LSETLENMHALNRMFSLETE +VL QK+RAKVEQ+QK
Sbjct: 494 IVNKLLHGPMQHLRCDGSDSRTLSETLENMHALNRMFSLETEIAVLEQKIRAKVEQNQK 552
Score = 100 bits (248), Expect(2) = 0.0
Identities = 63/125 (50%), Positives = 79/125 (63%), Gaps = 23/125 (18%)
Frame = +2
Query: 146 SMAAVKTMMESSCSSYSQFRII--------CKPKRT--FLFRRGGVT-----RCEAVSDN 280
S A ++ ++ S S+ S R + CK RT LF+R GV+ +CE S +
Sbjct: 8 SGAKLEALLFKSASNSSSTRNLSSSHLPGFCKSIRTRRILFQRTGVSSFTPFKCELASSD 67
Query: 281 --------NNTRVSSLSALEQLKASGADRYTKEKSSIIVLGLSIHTTPVEMREKLAIPEA 436
+ + S+LSALEQLK S DRYTKE+SSI+V+GLSIHTTPVEMREKLAIPEA
Sbjct: 68 VLVQNDEIDPPKSSNLSALEQLKTSAVDRYTKERSSIVVIGLSIHTTPVEMREKLAIPEA 127
Query: 437 EWPRA 451
EWPRA
Sbjct: 128 EWPRA 132
>ref|XP_002509995.1| Glutamyl-tRNA reductase 1, chloroplast precursor, putative [Ricinus
communis] gi|223550696|gb|EEF52182.1| Glutamyl-tRNA
reductase 1, chloroplast precursor, putative [Ricinus
communis]
Length = 565
Score = 631 bits (1628), Expect(2) = 0.0
Identities = 325/416 (78%), Positives = 359/416 (86%)
Frame = +3
Query: 540 GELCGLNHIEEAGVLSTCNRMEIYVVALSWHRGVRELTEWMAKTSGIPASELRHHLFMLR 719
GELC LNHI+EA VLSTCNRMEIYVVALS HRGV+E+TEWM+KTSGIP SE+ H F+L
Sbjct: 149 GELCSLNHIDEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKTSGIPVSEICEHQFLLY 208
Query: 720 DGDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKSGEGVNGFGRNISGLFKHAITVGKRV 899
+ DATQHLFEVSAGLDSLVLGEGQILAQVKQVVK G+GV GFGRNISGLFKHAI+VGKRV
Sbjct: 209 NNDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISVGKRV 268
Query: 900 RTETNIXXXXXXXXXXXXELAIMKLPQNSSATARVLVVGAGKMGKLVIKHLVAKGWTKIV 1079
RTETNI ELA+MKLP++S ATAR+LV+GAGKMGKLVIKHLVAKG TK+V
Sbjct: 269 RTETNIAAGAVSVSSAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMV 328
Query: 1080 VVNRSEERVEAIREEMRDIEIIYKPLTEMLACAGESDVVFTSTASETLLFTKENVETLPP 1259
VVNRSEERV AIREE++D+EIIYKPL EML CA E+DVVFTSTASET LF KENV+ LP
Sbjct: 329 VVNRSEERVAAIREEIKDVEIIYKPLDEMLTCAAEADVVFTSTASETPLFLKENVKDLPS 388
Query: 1260 VGSINGVSRLFVDISVPRNVGSCVSDVENTRVYNVDDLKEVVAANKEDRNRKAMEAQVII 1439
V S G RLFVDISVPRNVGSCV+DVE RVYNVDDLKEVVAANKEDR RKAMEAQ II
Sbjct: 389 VSSEVGSLRLFVDISVPRNVGSCVNDVEKARVYNVDDLKEVVAANKEDRLRKAMEAQAII 448
Query: 1440 TEESKQFGAWRDSLETVPTIKKLRALVEGIRMTELERCFSKIGDDIPKKTRAAIEGLSRG 1619
TEESKQF AWRDSLETVPTIKKLRA E IR+ EL++C SK+G++IPKKTR A++ LSRG
Sbjct: 449 TEESKQFEAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGEEIPKKTRRAVDDLSRG 508
Query: 1620 MMNKVLHGPMQHLRCDGSDCSQLSETLENMHALNRMFSLETEASVLGQKVRAKVEQ 1787
++NK+LHGPMQHLRCDGSD LSETLENMHALNRMFSLETE +VL QK+RAK Q
Sbjct: 509 IVNKLLHGPMQHLRCDGSDSRTLSETLENMHALNRMFSLETEVAVLEQKLRAKTSQ 564
Score = 108 bits (269), Expect(2) = 0.0
Identities = 66/145 (45%), Positives = 85/145 (58%), Gaps = 37/145 (25%)
Frame = +2
Query: 128 ATGFAKSMAAVK----------TMMESSCSSYS-------QFRIICKPKRT--------- 229
++GFA +++ K + S CSS+ + R+ CKP R
Sbjct: 4 SSGFATTLSGAKMEALLLNSSASSSSSGCSSFRTHLVSVPKIRVFCKPSRNNTNDNGKYR 63
Query: 230 -FLFRRGGVTRCEAVSDNNNT----------RVSSLSALEQLKASGADRYTKEKSSIIVL 376
L +R GV RCE V+ ++ +VSSLSALEQLK S ADRYTKE++SI+V+
Sbjct: 64 RVLAQRAGV-RCEVVASTDSAVETDSNIDPAKVSSLSALEQLKTSAADRYTKERASIVVI 122
Query: 377 GLSIHTTPVEMREKLAIPEAEWPRA 451
GLS+HT PVEMREKLAIPEAEWPRA
Sbjct: 123 GLSVHTAPVEMREKLAIPEAEWPRA 147
>gb|AAD16897.1| glutamyl-tRNA reductase precursor [Glycine max]
Length = 542
Score = 623 bits (1607), Expect(2) = 0.0
Identities = 321/415 (77%), Positives = 356/415 (85%)
Frame = +3
Query: 543 ELCGLNHIEEAGVLSTCNRMEIYVVALSWHRGVRELTEWMAKTSGIPASELRHHLFMLRD 722
ELC LNHIEEA VLSTCNRMEIYVVALS HRGV+E+TEWM+KTSGIP ++L H F+L +
Sbjct: 126 ELCSLNHIEEAAVLSTCNRMEIYVVALSKHRGVKEVTEWMSKTSGIPVADLCQHQFLLYN 185
Query: 723 GDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKSGEGVNGFGRNISGLFKHAITVGKRVR 902
DATQHLFEVSAGLDSLVLGEGQILAQVKQVVK G+GVNGFGRNISGLFKHAITVGKRVR
Sbjct: 186 KDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVNGFGRNISGLFKHAITVGKRVR 245
Query: 903 TETNIXXXXXXXXXXXXELAIMKLPQNSSATARVLVVGAGKMGKLVIKHLVAKGWTKIVV 1082
TETNI ELA+MKLP+ S A AR+LV+GAGKMGKLVIKHLVAKG TK+VV
Sbjct: 246 TETNIAAGAVSVSSAAVELALMKLPEASHANARMLVIGAGKMGKLVIKHLVAKGCTKMVV 305
Query: 1083 VNRSEERVEAIREEMRDIEIIYKPLTEMLACAGESDVVFTSTASETLLFTKENVETLPPV 1262
VNRSEERV AIREE++D+EIIYKPL+EML C GE+DVVFTSTASE LF K++V+ LPP
Sbjct: 306 VNRSEERVAAIREEIKDVEIIYKPLSEMLTCIGEADVVFTSTASENPLFLKDDVKELPPA 365
Query: 1263 GSINGVSRLFVDISVPRNVGSCVSDVENTRVYNVDDLKEVVAANKEDRNRKAMEAQVIIT 1442
G RLFVDISVPRNVGSC+SD+E+ RVYNVDDLKEVVAANKEDR RKAMEAQ II
Sbjct: 366 TDEVGGRRLFVDISVPRNVGSCLSDLESVRVYNVDDLKEVVAANKEDRLRKAMEAQAIIG 425
Query: 1443 EESKQFGAWRDSLETVPTIKKLRALVEGIRMTELERCFSKIGDDIPKKTRAAIEGLSRGM 1622
EESKQF AWRDSLETVPTIKKLRA E IR+ ELE+C K+GDDI KKT+ A++ LSRG+
Sbjct: 426 EESKQFEAWRDSLETVPTIKKLRAYAERIRLAELEKCLGKMGDDINKKTQRAVDDLSRGI 485
Query: 1623 MNKVLHGPMQHLRCDGSDCSQLSETLENMHALNRMFSLETEASVLGQKVRAKVEQ 1787
+NK+LHGPMQHLRCDGSD LSETLENMHALNRMF+LETE SVL QK+RAKVEQ
Sbjct: 486 VNKLLHGPMQHLRCDGSDSRTLSETLENMHALNRMFNLETEISVLEQKIRAKVEQ 540
Score = 103 bits (257), Expect(2) = 0.0
Identities = 51/97 (52%), Positives = 71/97 (73%), Gaps = 5/97 (5%)
Frame = +2
Query: 176 SSCSSYSQFRIICKPKRTFLFRRGGVTRCEAVSDNN-----NTRVSSLSALEQLKASGAD 340
++ ++ + CK ++T + + G RCEA S ++ + +S+SALEQLK S AD
Sbjct: 27 ATATTTTHLSCFCKTRKTLVQSQRGPIRCEASSASDVVADATKKAASVSALEQLKTSAAD 86
Query: 341 RYTKEKSSIIVLGLSIHTTPVEMREKLAIPEAEWPRA 451
RYTKE+SS++V+GLS+H+TPVEMREKLAIPEAEWPRA
Sbjct: 87 RYTKERSSVMVIGLSVHSTPVEMREKLAIPEAEWPRA 123