BLASTX nr result

ID: Coptis25_contig00008386 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008386
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512825.1| conserved hypothetical protein [Ricinus comm...   114   2e-38
ref|XP_003553984.1| PREDICTED: uncharacterized protein LOC100819...   122   3e-38
ref|XP_002275991.1| PREDICTED: uncharacterized protein LOC100241...   115   2e-37
ref|XP_003548851.1| PREDICTED: uncharacterized protein LOC100813...   120   9e-37
ref|XP_002885308.1| hypothetical protein ARALYDRAFT_342068 [Arab...   115   4e-36

>ref|XP_002512825.1| conserved hypothetical protein [Ricinus communis]
           gi|223547836|gb|EEF49328.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 555

 Score =  114 bits (286), Expect(2) = 2e-38
 Identities = 52/95 (54%), Positives = 70/95 (73%)
 Frame = -3

Query: 406 LDIRLLKRYFEEHHNENLPAFSNKYIIFCRGTGIDHTTDFFFLEKVNIIIRRLWAWLLRV 227
           LD  +LK+YF  H  E+LP F +KY+IF RG GID TTD+F +EKV+++I R WA++LR+
Sbjct: 141 LDKEVLKKYFAAHPREDLPDFVDKYVIFRRGIGIDRTTDYFIMEKVDMLIARFWAYILRL 200

Query: 226 TRIEHIISRKRRAARQKDPKKIDEINIEGDQEDLC 122
           TR+E ++ R+     +KDPKK DEIN E DQ DLC
Sbjct: 201 TRVEKLLRRRSSMRCKKDPKKNDEINSEADQNDLC 235



 Score = 69.7 bits (169), Expect(2) = 2e-38
 Identities = 31/41 (75%), Positives = 39/41 (95%)
 Frame = -1

Query: 129 ICVERIRIENMELSMQNMLNKVTIQEPTFDRVIVVYRRASN 7
           +CVERIR+ENMELS++N+L+  TIQEPTFDR+IVVYRRAS+
Sbjct: 234 LCVERIRLENMELSVRNLLSSTTIQEPTFDRIIVVYRRASS 274


>ref|XP_003553984.1| PREDICTED: uncharacterized protein LOC100819645 [Glycine max]
          Length = 492

 Score =  122 bits (307), Expect(2) = 3e-38
 Identities = 56/94 (59%), Positives = 76/94 (80%)
 Frame = -3

Query: 406 LDIRLLKRYFEEHHNENLPAFSNKYIIFCRGTGIDHTTDFFFLEKVNIIIRRLWAWLLRV 227
           LD  LLK+YFEEHH+++LP FS+KY+IF RG GID TTD+F +EKV+++I R WA+LLRV
Sbjct: 144 LDKTLLKKYFEEHHHDDLPDFSDKYVIFRRGIGIDRTTDYFVMEKVDMLIGRFWAYLLRV 203

Query: 226 TRIEHIISRKRRAARQKDPKKIDEINIEGDQEDL 125
           TR+E ++SR+ +   +KDPKK +EIN E D +DL
Sbjct: 204 TRLEKLLSRRSKRHNKKDPKKDNEINSEADGQDL 237



 Score = 60.8 bits (146), Expect(2) = 3e-38
 Identities = 28/37 (75%), Positives = 32/37 (86%)
 Frame = -1

Query: 123 VERIRIENMELSMQNMLNKVTIQEPTFDRVIVVYRRA 13
           VERIR+ENM+LS  N+L K  IQEPTFDR+IVVYRRA
Sbjct: 239 VERIRLENMQLSFHNLLGKTLIQEPTFDRIIVVYRRA 275


>ref|XP_002275991.1| PREDICTED: uncharacterized protein LOC100241226 [Vitis vinifera]
          Length = 492

 Score =  115 bits (287), Expect(2) = 2e-37
 Identities = 54/94 (57%), Positives = 69/94 (73%)
 Frame = -3

Query: 406 LDIRLLKRYFEEHHNENLPAFSNKYIIFCRGTGIDHTTDFFFLEKVNIIIRRLWAWLLRV 227
           LD +LL RYF EH  EN+P FS+KY+IF RG GID T+D+FF+EKV++II RLW  LL++
Sbjct: 144 LDKKLLGRYFSEHPQENIPDFSDKYVIFRRGIGIDRTSDYFFMEKVDMIISRLWLMLLKL 203

Query: 226 TRIEHIISRKRRAARQKDPKKIDEINIEGDQEDL 125
           TR+E    RK  A  +KDPKK DEI  E + +DL
Sbjct: 204 TRLERFFFRKSHAREKKDPKKNDEIRTEAEADDL 237



 Score = 65.9 bits (159), Expect(2) = 2e-37
 Identities = 31/43 (72%), Positives = 37/43 (86%)
 Frame = -1

Query: 129 ICVERIRIENMELSMQNMLNKVTIQEPTFDRVIVVYRRASNDA 1
           + VERIRIENMELS++N+  K+TIQEPTFDR+IVVYRRA   A
Sbjct: 237 LSVERIRIENMELSVRNLAGKITIQEPTFDRIIVVYRRACTAA 279


>ref|XP_003548851.1| PREDICTED: uncharacterized protein LOC100813179 [Glycine max]
          Length = 492

 Score =  120 bits (300), Expect(2) = 9e-37
 Identities = 55/94 (58%), Positives = 75/94 (79%)
 Frame = -3

Query: 406 LDIRLLKRYFEEHHNENLPAFSNKYIIFCRGTGIDHTTDFFFLEKVNIIIRRLWAWLLRV 227
           LD  LLK+YFEEHH+++LP FS+KY+IF RG GID T D+F +EKV+++I R WA+LLRV
Sbjct: 144 LDKILLKKYFEEHHHDDLPDFSDKYVIFRRGIGIDRTADYFVMEKVDMLIGRFWAYLLRV 203

Query: 226 TRIEHIISRKRRAARQKDPKKIDEINIEGDQEDL 125
           TR+E ++SR+ +   +KDPKK +EIN E D +DL
Sbjct: 204 TRLEKLLSRRLKRRNKKDPKKDNEINSEADGQDL 237



 Score = 58.5 bits (140), Expect(2) = 9e-37
 Identities = 27/39 (69%), Positives = 33/39 (84%)
 Frame = -1

Query: 123 VERIRIENMELSMQNMLNKVTIQEPTFDRVIVVYRRASN 7
           VERIR+E+M+LS +N+L K  IQEPTFDR+IVVYR A N
Sbjct: 239 VERIRLESMQLSFRNLLGKTLIQEPTFDRIIVVYRGARN 277


>ref|XP_002885308.1| hypothetical protein ARALYDRAFT_342068 [Arabidopsis lyrata subsp.
           lyrata] gi|297331148|gb|EFH61567.1| hypothetical protein
           ARALYDRAFT_342068 [Arabidopsis lyrata subsp. lyrata]
          Length = 524

 Score =  115 bits (288), Expect(2) = 4e-36
 Identities = 50/94 (53%), Positives = 75/94 (79%)
 Frame = -3

Query: 406 LDIRLLKRYFEEHHNENLPAFSNKYIIFCRGTGIDHTTDFFFLEKVNIIIRRLWAWLLRV 227
           LD +LLKRYFEEH +EN+P FS+KY+IF RG G+D TTD+FF+EK+++II R W++L+R+
Sbjct: 147 LDKKLLKRYFEEHPHENIPDFSDKYVIFRRGIGLDKTTDYFFMEKLDVIISRFWSFLMRI 206

Query: 226 TRIEHIISRKRRAARQKDPKKIDEINIEGDQEDL 125
           TR+E + +++  +  +KDPKK DE N + D ++L
Sbjct: 207 TRLEKLRAKRSNSLNKKDPKKDDEPNPDTDNDEL 240



 Score = 61.2 bits (147), Expect(2) = 4e-36
 Identities = 28/39 (71%), Positives = 37/39 (94%)
 Frame = -1

Query: 123 VERIRIENMELSMQNMLNKVTIQEPTFDRVIVVYRRASN 7
           VERIR+EN +LS+++ L+K+TIQEPTFDR+IVVYRRAS+
Sbjct: 242 VERIRLENSKLSVKSFLSKLTIQEPTFDRIIVVYRRASS 280


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