BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008372
         (1419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001189735.1| F-box protein [Arabidopsis thaliana] gi|1222...    72   3e-10
ref|NP_181801.1| F-box protein [Arabidopsis thaliana] gi|4512680...    72   3e-10
sp|Q9FJV2.2|FBD27_ARATH RecName: Full=Putative FBD-associated F-...    65   3e-08
ref|XP_002881870.1| predicted protein [Arabidopsis lyrata subsp....    64   1e-07
ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein...    63   2e-07

>ref|NP_001189735.1| F-box protein [Arabidopsis thaliana]
           gi|122223784|sp|Q0WR05.1|FBL39_ARATH RecName:
           Full=F-box/LRR-repeat protein At2g42730
           gi|110736977|dbj|BAF00444.1| hypothetical protein
           [Arabidopsis thaliana] gi|330255068|gb|AEC10162.1| F-box
           protein [Arabidopsis thaliana]
          Length = 457

 Score = 72.4 bits (176), Expect = 3e-10
 Identities = 71/257 (27%), Positives = 116/257 (45%), Gaps = 16/257 (6%)
 Frame = +3

Query: 12  LSNLKFDQVDFEETKKRKR----GDFRDFVDETLLSHNGSDIKRFSLTVKVGDTF-ISSR 176
           +SNL  D        K+ R     ++  FVD+ L +  GS IK+ +L   VG      S 
Sbjct: 44  VSNLDIDDRQSVPKTKQNRIEIHRNYMAFVDKLLDTQRGSSIKKLTLKSHVGVRGGTDSS 103

Query: 177 HLNSWISFAVKHNVQDFEIS-SYGDDIEKLPQCLFXXXXXXXXXX-YSVVIKGPRNIKFP 350
            + SWI   + H V D ++  +       +P  +F               IK  +++  P
Sbjct: 104 RIQSWICNVLDHGVMDLDVFITLKGKSPPVPAMIFKSKTLVKLRVGRGFTIKLSQDVSLP 163

Query: 351 MLKSLALLEVT-INDENLVNSLLSSSTCPVIEKLVMRLCSMAINTLSISIPTLKHLHL-L 524
           +L++L L  V  +   N+V +L+S   CPV+E+LV+        T S+S P+LK LH+  
Sbjct: 164 LLRTLCLDSVNFVGGHNVVGTLISR--CPVLEELVVEERRCVDWTCSVSSPSLKRLHIRF 221

Query: 525 DSNYPDINISNSVLRKLK---YMCGKPPNLIYENLVSVVSAKLQFELD----FSYYGGSM 683
           D  +  I++    L   K   Y+ GK PN+    L S++ A+L   +D         GS+
Sbjct: 222 DRKFTSISLDAPNLIYYKHSGYVLGKYPNV---KLDSLIEARLNLRMDETRMVGVRNGSL 278

Query: 684 DSVSKCASKILVWLRNV 734
            S+      ++  +RNV
Sbjct: 279 GSIPADMRNLINGIRNV 295


>ref|NP_181801.1| F-box protein [Arabidopsis thaliana] gi|4512680|gb|AAD21734.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|330255067|gb|AEC10161.1| F-box protein [Arabidopsis
           thaliana]
          Length = 737

 Score = 72.4 bits (176), Expect = 3e-10
 Identities = 71/257 (27%), Positives = 116/257 (45%), Gaps = 16/257 (6%)
 Frame = +3

Query: 12  LSNLKFDQVDFEETKKRKR----GDFRDFVDETLLSHNGSDIKRFSLTVKVGDTF-ISSR 176
           +SNL  D        K+ R     ++  FVD+ L +  GS IK+ +L   VG      S 
Sbjct: 44  VSNLDIDDRQSVPKTKQNRIEIHRNYMAFVDKLLDTQRGSSIKKLTLKSHVGVRGGTDSS 103

Query: 177 HLNSWISFAVKHNVQDFEIS-SYGDDIEKLPQCLFXXXXXXXXXX-YSVVIKGPRNIKFP 350
            + SWI   + H V D ++  +       +P  +F               IK  +++  P
Sbjct: 104 RIQSWICNVLDHGVMDLDVFITLKGKSPPVPAMIFKSKTLVKLRVGRGFTIKLSQDVSLP 163

Query: 351 MLKSLALLEVT-INDENLVNSLLSSSTCPVIEKLVMRLCSMAINTLSISIPTLKHLHL-L 524
           +L++L L  V  +   N+V +L+S   CPV+E+LV+        T S+S P+LK LH+  
Sbjct: 164 LLRTLCLDSVNFVGGHNVVGTLISR--CPVLEELVVEERRCVDWTCSVSSPSLKRLHIRF 221

Query: 525 DSNYPDINISNSVLRKLK---YMCGKPPNLIYENLVSVVSAKLQFELD----FSYYGGSM 683
           D  +  I++    L   K   Y+ GK PN+    L S++ A+L   +D         GS+
Sbjct: 222 DRKFTSISLDAPNLIYYKHSGYVLGKYPNV---KLDSLIEARLNLRMDETRMVGVRNGSL 278

Query: 684 DSVSKCASKILVWLRNV 734
            S+      ++  +RNV
Sbjct: 279 GSIPADMRNLINGIRNV 295


>sp|Q9FJV2.2|FBD27_ARATH RecName: Full=Putative FBD-associated F-box protein At5g56560
          Length = 418

 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 56/194 (28%), Positives = 90/194 (46%), Gaps = 1/194 (0%)
 Frame = +3

Query: 75  FRDFVDETLLSHNGSDIKRFSLTVKVGDTFISSRHLNSWISFAVKHNVQDFEISSYGDDI 254
           F  FV  + LS++   + R  L  K+   + S+  +N W+  AV  +V++  I  +G  +
Sbjct: 63  FMSFVYGSFLSNDAQILDRLHL--KLNQKY-SASDINFWVQVAVNRSVRELRIDLFGKTL 119

Query: 255 EKLPQCLFXXXXXXXXXXYSVVIKG-PRNIKFPMLKSLALLEVTINDENLVNSLLSSSTC 431
           E LP CL           + + IK  P   + P LK+L LL V  + +  V S+L    C
Sbjct: 120 E-LPCCLCSCITLKELTLHDLCIKVVPAWFRLPSLKTLHLLSVKFSSDGFVASILR--IC 176

Query: 432 PVIEKLVMRLCSMAINTLSISIPTLKHLHLLDSNYPDINISNSVLRKLKYMCGKPPNLIY 611
           PV+E+LV+      +   +I +PTL++L + +S      +  S     K    K P+L  
Sbjct: 177 PVLERLVVDGTKGNVMITNIDVPTLRNLSIRNSKGKGTYVEGS-----KGFVIKAPSLTD 231

Query: 612 ENLVSVVSAKLQFE 653
            N    +S  L FE
Sbjct: 232 LNFEDTLSNFLMFE 245


>ref|XP_002881870.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297327709|gb|EFH58129.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 220

 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 59/204 (28%), Positives = 95/204 (46%), Gaps = 8/204 (3%)
 Frame = +3

Query: 72  DFRDFVDETLLSHNGSDIKRFSLTVKVGDTF-ISSRHLNSWISFAVKHNVQDFEIS-SYG 245
           +F  FVD+ L    GS IK+ +L   VG      S  + +WI   + H V D ++  +  
Sbjct: 11  NFMAFVDKLLDPQRGSSIKKLTLKSHVGVRGGTDSSRIQTWICNVLDHGVVDLDMFITLK 70

Query: 246 DDIEKLPQCLFXXXXXXXXXX-YSVVIKGPRNIKFPMLKSLALLEVT-INDENLVNSLLS 419
                +P  +F               IK  +++  PML++L L  V  +   N+V +L+S
Sbjct: 71  GKSPPVPSLIFKSKTLVKLRLGRGFTIKPSQDVSLPMLRTLFLDSVNFVGGHNVVGTLIS 130

Query: 420 SSTCPVIEKLVMRLCSMAINTLSISIPTLKHLHL-LDSNYPDINISNSVLRKLK---YMC 587
              CPV+E+LV+        T S+S  +LK LH+  D  +  I++    L   K   Y+ 
Sbjct: 131 R--CPVLEELVVEERRCVDWTCSVSSTSLKRLHIRFDRKFTSISLDAPNLVYYKHSGYVL 188

Query: 588 GKPPNLIYENLVSVVSAKLQFELD 659
           GK PN+    L S++ A+L   +D
Sbjct: 189 GKYPNV---KLDSLIEARLNLRMD 209


>ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein At5g02930-like [Vitis
           vinifera]
          Length = 610

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 9/162 (5%)
 Frame = +3

Query: 57  KRKRGDFRDFVDETLLSHNGSDIKRFSLTVKVGDTFISSRHLNSWISFAVKHNVQDFEI- 233
           +R+   F + +D+TL+ H  S IK+F +       F SS  +N WI  A + NV++  + 
Sbjct: 121 RRRDEHFVNSIDKTLVLHQNSQIKKFLIDFTYQSQFQSS--VNVWIRHATRKNVEELHLQ 178

Query: 234 --------SSYGDDIEKLPQCLFXXXXXXXXXXYSVVIKGPRNIKFPMLKSLALLEVTIN 389
                   SS  D    LPQ L+          +   IK    I +P LK+L++  V + 
Sbjct: 179 FRVGQHIRSSPMDYAHALPQFLYANSSIVKLSLWFCNIKPTWVISWPSLKTLSIGSVELC 238

Query: 390 DENLVNSLLSSSTCPVIEKLVMRLCSMAINTLSISIPTLKHL 515
           D+ L+  +LS   CP +E L +  C   IN+L+I+  +LK L
Sbjct: 239 DD-LIEEILSG--CPALESLELHHC-FGINSLNITSASLKKL 276