BLASTX nr result

ID: Coptis25_contig00008359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008359
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003629984.1| Transmembrane emp24 domain-containing protei...   133   2e-29
ref|XP_003629981.1| Transmembrane emp24 domain-containing protei...   133   2e-29
ref|XP_002272994.1| PREDICTED: transmembrane emp24 domain-contai...   132   4e-29
ref|XP_002531428.1| Transmembrane emp24 domain-containing protei...   132   4e-29
emb|CBI23839.3| unnamed protein product [Vitis vinifera]              132   4e-29

>ref|XP_003629984.1| Transmembrane emp24 domain-containing protein [Medicago truncatula]
           gi|355524006|gb|AET04460.1| Transmembrane emp24
           domain-containing protein [Medicago truncatula]
          Length = 162

 Score =  133 bits (334), Expect = 2e-29
 Identities = 66/74 (89%), Positives = 68/74 (91%)
 Frame = -1

Query: 390 EGVELELRKLEGAVEAIHENLLYLKGREAEMREVSELTNSRVAWFSVMSLGVCIVVSGLQ 211
           EGVELELRKLEGAVEAIHENLLYLKGREAEMR VSE TN RVAWFS+MSLG+CI VS LQ
Sbjct: 89  EGVELELRKLEGAVEAIHENLLYLKGREAEMRIVSERTNGRVAWFSIMSLGICIGVSALQ 148

Query: 210 LWHLKHFFQKKKLI 169
           LWHLK FFQKKKLI
Sbjct: 149 LWHLKRFFQKKKLI 162


>ref|XP_003629981.1| Transmembrane emp24 domain-containing protein [Medicago truncatula]
           gi|355524003|gb|AET04457.1| Transmembrane emp24
           domain-containing protein [Medicago truncatula]
          Length = 211

 Score =  133 bits (334), Expect = 2e-29
 Identities = 66/74 (89%), Positives = 68/74 (91%)
 Frame = -1

Query: 390 EGVELELRKLEGAVEAIHENLLYLKGREAEMREVSELTNSRVAWFSVMSLGVCIVVSGLQ 211
           EGVELELRKLEGAVEAIHENLLYLKGREAEMR VSE TN RVAWFS+MSLG+CI VS LQ
Sbjct: 138 EGVELELRKLEGAVEAIHENLLYLKGREAEMRIVSERTNGRVAWFSIMSLGICIGVSALQ 197

Query: 210 LWHLKHFFQKKKLI 169
           LWHLK FFQKKKLI
Sbjct: 198 LWHLKRFFQKKKLI 211


>ref|XP_002272994.1| PREDICTED: transmembrane emp24 domain-containing protein 10-like
           [Vitis vinifera]
          Length = 216

 Score =  132 bits (331), Expect = 4e-29
 Identities = 65/74 (87%), Positives = 68/74 (91%)
 Frame = -1

Query: 390 EGVELELRKLEGAVEAIHENLLYLKGREAEMREVSELTNSRVAWFSVMSLGVCIVVSGLQ 211
           EGVELELRKLEGAVEAIHENLLYLK REAEMR VSE TN+RVAW+S+MSLGVCI VS LQ
Sbjct: 143 EGVELELRKLEGAVEAIHENLLYLKSREAEMRMVSEKTNARVAWYSIMSLGVCIAVSALQ 202

Query: 210 LWHLKHFFQKKKLI 169
           LWHLK FFQKKKLI
Sbjct: 203 LWHLKRFFQKKKLI 216


>ref|XP_002531428.1| Transmembrane emp24 domain-containing protein 10 precursor,
           putative [Ricinus communis] gi|223528978|gb|EEF30970.1|
           Transmembrane emp24 domain-containing protein 10
           precursor, putative [Ricinus communis]
          Length = 217

 Score =  132 bits (331), Expect = 4e-29
 Identities = 64/74 (86%), Positives = 69/74 (93%)
 Frame = -1

Query: 390 EGVELELRKLEGAVEAIHENLLYLKGREAEMREVSELTNSRVAWFSVMSLGVCIVVSGLQ 211
           EGVELELRKLEGAVEAIHENLLYLK REAE+R +SE TN+RVAWFS+MSLGVCI+VS LQ
Sbjct: 144 EGVELELRKLEGAVEAIHENLLYLKSREAELRTMSETTNARVAWFSIMSLGVCILVSALQ 203

Query: 210 LWHLKHFFQKKKLI 169
           LWHLK FFQKKKLI
Sbjct: 204 LWHLKRFFQKKKLI 217


>emb|CBI23839.3| unnamed protein product [Vitis vinifera]
          Length = 192

 Score =  132 bits (331), Expect = 4e-29
 Identities = 65/74 (87%), Positives = 68/74 (91%)
 Frame = -1

Query: 390 EGVELELRKLEGAVEAIHENLLYLKGREAEMREVSELTNSRVAWFSVMSLGVCIVVSGLQ 211
           EGVELELRKLEGAVEAIHENLLYLK REAEMR VSE TN+RVAW+S+MSLGVCI VS LQ
Sbjct: 119 EGVELELRKLEGAVEAIHENLLYLKSREAEMRMVSEKTNARVAWYSIMSLGVCIAVSALQ 178

Query: 210 LWHLKHFFQKKKLI 169
           LWHLK FFQKKKLI
Sbjct: 179 LWHLKRFFQKKKLI 192


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