BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008349
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308731.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
ref|XP_003594400.1| Pre-mRNA-splicing factor cwc25 [Medicago tru...    93   2e-17
ref|XP_002525246.1| expressed protein, putative [Ricinus communi...    92   4e-17
ref|NP_001062154.1| Os08g0500200 [Oryza sativa Japonica Group] g...    91   1e-16
ref|XP_002265487.2| PREDICTED: uncharacterized protein LOC100243...    91   1e-16

>ref|XP_002308731.1| predicted protein [Populus trichocarpa] gi|222854707|gb|EEE92254.1|
           predicted protein [Populus trichocarpa]
          Length = 467

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 43/51 (84%), Positives = 49/51 (96%)
 Frame = +2

Query: 44  SNAPGALFDERPQSSNDAWRKLHSDPLLLIRQREQEAIARIKNNPIQMASI 196
           S+APGALF+++P SSNDAWRKLHSDPLLLIRQREQEA+AR+KNNPIQMA I
Sbjct: 122 SSAPGALFEDKPHSSNDAWRKLHSDPLLLIRQREQEALARVKNNPIQMAMI 172


>ref|XP_003594400.1| Pre-mRNA-splicing factor cwc25 [Medicago truncatula]
           gi|355483448|gb|AES64651.1| Pre-mRNA-splicing factor
           cwc25 [Medicago truncatula]
          Length = 504

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 45/71 (63%), Positives = 57/71 (80%), Gaps = 6/71 (8%)
 Frame = +2

Query: 2   LEAVPPKNDEDTGPSNA------PGALFDERPQSSNDAWRKLHSDPLLLIRQREQEAIAR 163
           LEA+P  +  D   S+A      PGALF+E+PQS+ND+WRKLHSDPLL+IRQREQEA+A+
Sbjct: 88  LEALPKSDPTDAPSSSASKDATVPGALFEEKPQSANDSWRKLHSDPLLMIRQREQEALAK 147

Query: 164 IKNNPIQMASI 196
           IKNNP++MA I
Sbjct: 148 IKNNPVKMAMI 158


>ref|XP_002525246.1| expressed protein, putative [Ricinus communis]
           gi|223535543|gb|EEF37212.1| expressed protein, putative
           [Ricinus communis]
          Length = 444

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 45/68 (66%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
 Frame = +2

Query: 5   EAVPPKNDEDTGPSNA----PGALFDERPQSSNDAWRKLHSDPLLLIRQREQEAIARIKN 172
           EAVP  N      S++    PGALF+++P S+NDAWRKLHSDPLLLIRQREQEA+ARIKN
Sbjct: 98  EAVPTPNKTPNASSSSHPSVPGALFEDKPHSANDAWRKLHSDPLLLIRQREQEALARIKN 157

Query: 173 NPIQMASI 196
           NP+QM+ I
Sbjct: 158 NPVQMSLI 165


>ref|NP_001062154.1| Os08g0500200 [Oryza sativa Japonica Group]
           gi|42407352|dbj|BAD08813.1| unknown protein [Oryza
           sativa Japonica Group] gi|113624123|dbj|BAF24068.1|
           Os08g0500200 [Oryza sativa Japonica Group]
           gi|215686714|dbj|BAG88967.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 513

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 41/49 (83%), Positives = 48/49 (97%)
 Frame = +2

Query: 50  APGALFDERPQSSNDAWRKLHSDPLLLIRQREQEAIARIKNNPIQMASI 196
           APGALF+++PQS+NDAWRKLH+DPLLLIRQREQ+AIARIKNNPI+MA I
Sbjct: 115 APGALFEDKPQSANDAWRKLHTDPLLLIRQREQDAIARIKNNPIKMAEI 163


>ref|XP_002265487.2| PREDICTED: uncharacterized protein LOC100243706 [Vitis vinifera]
          Length = 621

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 46/70 (65%), Positives = 55/70 (78%), Gaps = 5/70 (7%)
 Frame = +2

Query: 2   LEAVPPKNDEDTGPS-----NAPGALFDERPQSSNDAWRKLHSDPLLLIRQREQEAIARI 166
           LEA+P  ND  +  S     + PGALF+E+PQS+ND WRKLHSDPLL+IRQREQEA+A I
Sbjct: 89  LEALP-SNDVASSSSAKQQPSVPGALFEEKPQSANDTWRKLHSDPLLMIRQREQEALAHI 147

Query: 167 KNNPIQMASI 196
           KNNP+QMA I
Sbjct: 148 KNNPVQMAMI 157