BLASTX nr result
ID: Coptis25_contig00008334
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00008334
(1627 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_178533.2| 3-oxoacyl-[acyl-carrier-protein] synthase [Arab... 432 e-138
pdb|1W0I|A Chain A, Arabidopsis Thaliana Mitochondrial Kas gi|56... 432 e-138
gb|AAD25826.1| 3-oxoacyl carrier protein synthase [Arabidopsis t... 432 e-138
ref|XP_002302852.1| predicted protein [Populus trichocarpa] gi|2... 462 e-128
ref|XP_002277197.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] ... 460 e-127
>ref|NP_178533.2| 3-oxoacyl-[acyl-carrier-protein] synthase [Arabidopsis thaliana]
gi|62286891|sp|Q8L3X9.1|KASM_ARATH RecName:
Full=3-oxoacyl-[acyl-carrier-protein] synthase,
mitochondrial; AltName: Full=Beta-ketoacyl-ACP synthase;
AltName: Full=mtKAS; Flags: Precursor
gi|20373025|dbj|BAB91181.1| 3-ketoacyl-acyl carrier
protein synthase [Arabidopsis thaliana]
gi|20466243|gb|AAM20439.1| 3-oxoacyl carrier protein
synthase [Arabidopsis thaliana]
gi|22136308|gb|AAM91232.1| 3-oxoacyl carrier protein
synthase [Arabidopsis thaliana]
gi|330250750|gb|AEC05844.1|
3-oxoacyl-[acyl-carrier-protein] synthase [Arabidopsis
thaliana]
Length = 461
Score = 432 bits (1112), Expect(2) = e-138
Identities = 212/293 (72%), Positives = 245/293 (83%)
Frame = +2
Query: 233 CTQRLRRLSPFFIPRILINMAAGHVSMRYGFKGPNHAAVTACATGAHSIGDAARMIQFGD 412
C +RLRRLSPFFIP+IL+NMA+GHVSM+YGF+GPNHAAVTACATGAHSIGDA RMIQFGD
Sbjct: 168 CEKRLRRLSPFFIPKILVNMASGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGD 227
Query: 413 SDVMVAGGTESSIDALSIAGFCRSRALATKYNSIPQEASRPFDCGRDGFXXXXXXXXXXX 592
+DVMVAGGTESSIDALS+AGF RSRAL+TK+NS PQEASRPFDC RDGF
Sbjct: 228 ADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDCDRDGFVIGEGSGVIVL 287
Query: 593 XXXXHAQERGAKIYAEVRGYGMSGDAYHITQPHTDGRGAILAMSSAIKQSGLNPNQVNYV 772
HA+ RGAKIYAE+ GYGMSGDA+HITQP DG+GA+LAM+ A++QSGL PNQ++YV
Sbjct: 288 EEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYV 347
Query: 773 NAHATSTPLGDAIEATAIKTVFSEHATSGALALSSTKXXXXXXXXXXXXVEAIFTVLALY 952
NAHATSTP+GDA+EA AIKTVFSEHATSG LA SSTK VEAIF++LA++
Sbjct: 348 NAHATSTPIGDAVEARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIH 407
Query: 953 HGIAPLTLNLSSPDPIFRDNFMPLTTSTEMNIRAALSNSFGFGGTNASLLFAS 1111
HG+AP+TLN+ +PDPIF FMPLTTS +M +R A+SNSFGFGGTNASLLFAS
Sbjct: 408 HGVAPMTLNVKNPDPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFAS 460
Score = 88.2 bits (217), Expect(2) = e-138
Identities = 39/58 (67%), Positives = 49/58 (84%)
Frame = +1
Query: 1 RSIARFIAYALCSTDEALRDANWFPTELDKKERTGVSIGAGTGSISDILDAAQMICEK 174
+++A FI YA+C+ DEALRDA W PTE ++KERTGVSIG G GSI DI++AAQ+ICEK
Sbjct: 113 KAVANFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEK 170
>pdb|1W0I|A Chain A, Arabidopsis Thaliana Mitochondrial Kas
gi|56966611|pdb|1W0I|B Chain B, Arabidopsis Thaliana
Mitochondrial Kas gi|126030848|pdb|2IX4|A Chain A,
Arabidopsis Thaliana Mitochondrial Beta-Ketoacyl Acp
Synthase Hexanoic Acid Complex gi|126030849|pdb|2IX4|B
Chain B, Arabidopsis Thaliana Mitochondrial Beta-Ketoacyl
Acp Synthase Hexanoic Acid Complex
Length = 431
Score = 432 bits (1112), Expect(2) = e-138
Identities = 212/293 (72%), Positives = 245/293 (83%)
Frame = +2
Query: 233 CTQRLRRLSPFFIPRILINMAAGHVSMRYGFKGPNHAAVTACATGAHSIGDAARMIQFGD 412
C +RLRRLSPFFIP+IL+NMA+GHVSM+YGF+GPNHAAVTACATGAHSIGDA RMIQFGD
Sbjct: 138 CEKRLRRLSPFFIPKILVNMASGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGD 197
Query: 413 SDVMVAGGTESSIDALSIAGFCRSRALATKYNSIPQEASRPFDCGRDGFXXXXXXXXXXX 592
+DVMVAGGTESSIDALS+AGF RSRAL+TK+NS PQEASRPFDC RDGF
Sbjct: 198 ADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDCDRDGFVIGEGSGVIVL 257
Query: 593 XXXXHAQERGAKIYAEVRGYGMSGDAYHITQPHTDGRGAILAMSSAIKQSGLNPNQVNYV 772
HA+ RGAKIYAE+ GYGMSGDA+HITQP DG+GA+LAM+ A++QSGL PNQ++YV
Sbjct: 258 EEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYV 317
Query: 773 NAHATSTPLGDAIEATAIKTVFSEHATSGALALSSTKXXXXXXXXXXXXVEAIFTVLALY 952
NAHATSTP+GDA+EA AIKTVFSEHATSG LA SSTK VEAIF++LA++
Sbjct: 318 NAHATSTPIGDAVEARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIH 377
Query: 953 HGIAPLTLNLSSPDPIFRDNFMPLTTSTEMNIRAALSNSFGFGGTNASLLFAS 1111
HG+AP+TLN+ +PDPIF FMPLTTS +M +R A+SNSFGFGGTNASLLFAS
Sbjct: 378 HGVAPMTLNVKNPDPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFAS 430
Score = 88.2 bits (217), Expect(2) = e-138
Identities = 39/58 (67%), Positives = 49/58 (84%)
Frame = +1
Query: 1 RSIARFIAYALCSTDEALRDANWFPTELDKKERTGVSIGAGTGSISDILDAAQMICEK 174
+++A FI YA+C+ DEALRDA W PTE ++KERTGVSIG G GSI DI++AAQ+ICEK
Sbjct: 83 KAVANFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEK 140
>gb|AAD25826.1| 3-oxoacyl carrier protein synthase [Arabidopsis thaliana]
Length = 442
Score = 432 bits (1112), Expect(2) = e-138
Identities = 212/293 (72%), Positives = 245/293 (83%)
Frame = +2
Query: 233 CTQRLRRLSPFFIPRILINMAAGHVSMRYGFKGPNHAAVTACATGAHSIGDAARMIQFGD 412
C +RLRRLSPFFIP+IL+NMA+GHVSM+YGF+GPNHAAVTACATGAHSIGDA RMIQFGD
Sbjct: 149 CEKRLRRLSPFFIPKILVNMASGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGD 208
Query: 413 SDVMVAGGTESSIDALSIAGFCRSRALATKYNSIPQEASRPFDCGRDGFXXXXXXXXXXX 592
+DVMVAGGTESSIDALS+AGF RSRAL+TK+NS PQEASRPFDC RDGF
Sbjct: 209 ADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDCDRDGFVIGEGSGVIVL 268
Query: 593 XXXXHAQERGAKIYAEVRGYGMSGDAYHITQPHTDGRGAILAMSSAIKQSGLNPNQVNYV 772
HA+ RGAKIYAE+ GYGMSGDA+HITQP DG+GA+LAM+ A++QSGL PNQ++YV
Sbjct: 269 EEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYV 328
Query: 773 NAHATSTPLGDAIEATAIKTVFSEHATSGALALSSTKXXXXXXXXXXXXVEAIFTVLALY 952
NAHATSTP+GDA+EA AIKTVFSEHATSG LA SSTK VEAIF++LA++
Sbjct: 329 NAHATSTPIGDAVEARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIH 388
Query: 953 HGIAPLTLNLSSPDPIFRDNFMPLTTSTEMNIRAALSNSFGFGGTNASLLFAS 1111
HG+AP+TLN+ +PDPIF FMPLTTS +M +R A+SNSFGFGGTNASLLFAS
Sbjct: 389 HGVAPMTLNVKNPDPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFAS 441
Score = 87.4 bits (215), Expect(2) = e-138
Identities = 39/57 (68%), Positives = 48/57 (84%)
Frame = +1
Query: 4 SIARFIAYALCSTDEALRDANWFPTELDKKERTGVSIGAGTGSISDILDAAQMICEK 174
++A FI YA+C+ DEALRDA W PTE ++KERTGVSIG G GSI DI++AAQ+ICEK
Sbjct: 95 AVANFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEK 151
>ref|XP_002302852.1| predicted protein [Populus trichocarpa] gi|222844578|gb|EEE82125.1|
predicted protein [Populus trichocarpa]
Length = 415
Score = 462 bits (1190), Expect = e-128
Identities = 231/306 (75%), Positives = 256/306 (83%)
Frame = +2
Query: 194 GSGNNVM*LFSAFCTQRLRRLSPFFIPRILINMAAGHVSMRYGFKGPNHAAVTACATGAH 373
GS +V+ C +RLRRLSPFFIPRILINMA+GHVSM+YGF+GPNHAAVTACATGAH
Sbjct: 109 GSITDVLEASQLICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAH 168
Query: 374 SIGDAARMIQFGDSDVMVAGGTESSIDALSIAGFCRSRALATKYNSIPQEASRPFDCGRD 553
SIGDAARMIQFGDS+VMVAGGTESSIDALSIAGFCRSRAL TK+NS+P EASRPFDC RD
Sbjct: 169 SIGDAARMIQFGDSNVMVAGGTESSIDALSIAGFCRSRALTTKHNSMPLEASRPFDCDRD 228
Query: 554 GFXXXXXXXXXXXXXXXHAQERGAKIYAEVRGYGMSGDAYHITQPHTDGRGAILAMSSAI 733
GF HA+ERGAKIYAE+RGYGMSGDAYHITQPH DGRGA+LAM+ A+
Sbjct: 229 GFVIGEGSGVLVLEELEHAKERGAKIYAEIRGYGMSGDAYHITQPHNDGRGAVLAMTRAL 288
Query: 734 KQSGLNPNQVNYVNAHATSTPLGDAIEATAIKTVFSEHATSGALALSSTKXXXXXXXXXX 913
KQSGL+PNQV+Y+NAHATSTPLGDA+EA AIKTVFSEHATSGALA SSTK
Sbjct: 289 KQSGLHPNQVDYINAHATSTPLGDAVEAIAIKTVFSEHATSGALAFSSTKGAIGHLLGAA 348
Query: 914 XXVEAIFTVLALYHGIAPLTLNLSSPDPIFRDNFMPLTTSTEMNIRAALSNSFGFGGTNA 1093
VEAIF +LA++HGIAPLTLNL+ PDP+F+DNFMPL S EM +RAALSNSFGFGGTNA
Sbjct: 349 GAVEAIFAILAVHHGIAPLTLNLNKPDPLFKDNFMPLIASKEMPVRAALSNSFGFGGTNA 408
Query: 1094 SLLFAS 1111
SLLF S
Sbjct: 409 SLLFTS 414
Score = 91.3 bits (225), Expect = 7e-16
Identities = 40/58 (68%), Positives = 51/58 (87%)
Frame = +1
Query: 1 RSIARFIAYALCSTDEALRDANWFPTELDKKERTGVSIGAGTGSISDILDAAQMICEK 174
RS++RFI YALC+ DEAL+DA W PTE ++KERTGVSIG G GSI+D+L+A+Q+ICEK
Sbjct: 67 RSVSRFIGYALCAADEALKDAKWAPTEQEQKERTGVSIGGGIGSITDVLEASQLICEK 124
>ref|XP_002277197.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial
[Vitis vinifera] gi|297739239|emb|CBI28890.3| unnamed
protein product [Vitis vinifera]
Length = 463
Score = 460 bits (1184), Expect = e-127
Identities = 232/307 (75%), Positives = 256/307 (83%)
Frame = +2
Query: 194 GSGNNVM*LFSAFCTQRLRRLSPFFIPRILINMAAGHVSMRYGFKGPNHAAVTACATGAH 373
GS ++++ C +RLRRLSPFFIPRILINMA+GHVSMRYGF+GPNHAAVTACATGAH
Sbjct: 156 GSISDILDAAQMICEKRLRRLSPFFIPRILINMASGHVSMRYGFQGPNHAAVTACATGAH 215
Query: 374 SIGDAARMIQFGDSDVMVAGGTESSIDALSIAGFCRSRALATKYNSIPQEASRPFDCGRD 553
SIGDA RMIQFGDSDVMVAGGTESSIDALSIAGFCRSRAL TKYNS PQEASRPFDCGRD
Sbjct: 216 SIGDAVRMIQFGDSDVMVAGGTESSIDALSIAGFCRSRALTTKYNSCPQEASRPFDCGRD 275
Query: 554 GFXXXXXXXXXXXXXXXHAQERGAKIYAEVRGYGMSGDAYHITQPHTDGRGAILAMSSAI 733
GF HA++RGAKIYAEVRGYGMSGDA+HITQPH DGRGAILAM+ A+
Sbjct: 276 GFVIGEGSGILVLEELVHAKKRGAKIYAEVRGYGMSGDAHHITQPHMDGRGAILAMTRAL 335
Query: 734 KQSGLNPNQVNYVNAHATSTPLGDAIEATAIKTVFSEHATSGALALSSTKXXXXXXXXXX 913
KQSGL+PNQV+YVNAHATSTPLGDAIEA AIK++FS+ ATSG+LALSSTK
Sbjct: 336 KQSGLHPNQVDYVNAHATSTPLGDAIEANAIKSIFSDQATSGSLALSSTKGAIGHLLGAA 395
Query: 914 XXVEAIFTVLALYHGIAPLTLNLSSPDPIFRDNFMPLTTSTEMNIRAALSNSFGFGGTNA 1093
VEAIF VLA++HGIAPLTLNL+ PDP+F +MPLT S EM +RAALSNSFGFGGTNA
Sbjct: 396 GAVEAIFAVLAIHHGIAPLTLNLTRPDPVFSGGYMPLTASREMPVRAALSNSFGFGGTNA 455
Query: 1094 SLLFASA 1114
SLLF SA
Sbjct: 456 SLLFTSA 462
Score = 95.5 bits (236), Expect = 4e-17
Identities = 46/58 (79%), Positives = 50/58 (86%)
Frame = +1
Query: 1 RSIARFIAYALCSTDEALRDANWFPTELDKKERTGVSIGAGTGSISDILDAAQMICEK 174
RSIARFI YALC+ DEAL DA W P+E ++KE TGVSIG GTGSISDILDAAQMICEK
Sbjct: 114 RSIARFIGYALCAADEALSDAKWAPSEQEQKEMTGVSIGGGTGSISDILDAAQMICEK 171