BLASTX nr result

ID: Coptis25_contig00008328 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008328
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515649.1| 3-5 exonuclease, putative [Ricinus communis]...   186   1e-45
ref|XP_003545636.1| PREDICTED: LOW QUALITY PROTEIN: probable exo...   184   5e-45
ref|XP_003543807.1| PREDICTED: probable exonuclease mut-7 homolo...   184   5e-45
gb|AFK45465.1| unknown [Lotus japonicus]                              183   1e-44
ref|XP_002461920.1| hypothetical protein SORBIDRAFT_02g010640 [S...   182   2e-44

>ref|XP_002515649.1| 3-5 exonuclease, putative [Ricinus communis]
           gi|223545192|gb|EEF46701.1| 3-5 exonuclease, putative
           [Ricinus communis]
          Length = 523

 Score =  186 bits (473), Expect = 1e-45
 Identities = 86/105 (81%), Positives = 98/105 (93%)
 Frame = +1

Query: 1   LIANQIYLVKSLLKDDQLLEVIQKFQLKISKTQLMSRCTKCNGSFIQKPLTTEEAVEAAK 180
           LI NQIY VKSLLK++QLLEVI+ F+L+IS+ QLMSRCTKCNG FIQKPL+TEEAVEAAK
Sbjct: 417 LIKNQIYRVKSLLKNEQLLEVIETFKLQISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAK 476

Query: 181 GFQIIPNCLFNRNVEFWQCMDCNQLYWEGTQYQNALQKFIDVCNL 315
           GFQ IP+CLFN+N+EFWQCMDCNQLYWEGTQYQNA+QKFID+C L
Sbjct: 477 GFQKIPDCLFNKNLEFWQCMDCNQLYWEGTQYQNAVQKFIDICKL 521


>ref|XP_003545636.1| PREDICTED: LOW QUALITY PROTEIN: probable exonuclease mut-7 homolog
           [Glycine max]
          Length = 499

 Score =  184 bits (468), Expect = 5e-45
 Identities = 83/107 (77%), Positives = 98/107 (91%)
 Frame = +1

Query: 1   LIANQIYLVKSLLKDDQLLEVIQKFQLKISKTQLMSRCTKCNGSFIQKPLTTEEAVEAAK 180
           L  NQIY VKSLLK++QLLEVI+ FQ+KI++ +LMSRCTKCNG+FIQKPLTTEEA+EAAK
Sbjct: 393 LTQNQIYRVKSLLKNEQLLEVIEAFQIKINEDKLMSRCTKCNGTFIQKPLTTEEAIEAAK 452

Query: 181 GFQIIPNCLFNRNVEFWQCMDCNQLYWEGTQYQNALQKFIDVCNLKN 321
           GFQ IPNCLFN+N+EFWQCMDC+QLYWEGTQY NA+QKFID+C L +
Sbjct: 453 GFQRIPNCLFNKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDICKLSD 499


>ref|XP_003543807.1| PREDICTED: probable exonuclease mut-7 homolog [Glycine max]
          Length = 506

 Score =  184 bits (468), Expect = 5e-45
 Identities = 82/107 (76%), Positives = 98/107 (91%)
 Frame = +1

Query: 1   LIANQIYLVKSLLKDDQLLEVIQKFQLKISKTQLMSRCTKCNGSFIQKPLTTEEAVEAAK 180
           L  NQIY VK+LLK++QLLEVI+ FQ+KI++ QLMSRCTKCNG+FIQKPLTTEEA+EAAK
Sbjct: 400 LTKNQIYRVKTLLKNEQLLEVIEAFQIKINEDQLMSRCTKCNGTFIQKPLTTEEAIEAAK 459

Query: 181 GFQIIPNCLFNRNVEFWQCMDCNQLYWEGTQYQNALQKFIDVCNLKN 321
           GFQ IPNCLFN+N+EFWQCMDC+QLYWEGTQY NA+QKF+D+C L +
Sbjct: 460 GFQRIPNCLFNKNLEFWQCMDCHQLYWEGTQYHNAVQKFVDICKLSD 506


>gb|AFK45465.1| unknown [Lotus japonicus]
          Length = 236

 Score =  183 bits (465), Expect = 1e-44
 Identities = 83/107 (77%), Positives = 97/107 (90%)
 Frame = +1

Query: 1   LIANQIYLVKSLLKDDQLLEVIQKFQLKISKTQLMSRCTKCNGSFIQKPLTTEEAVEAAK 180
           L  NQIY VKSLLK++QLLE+I+ FQLKIS+ +LMSRCTKCNG FIQKPLTTEEAVEAAK
Sbjct: 130 LANNQIYKVKSLLKNEQLLEIIETFQLKISEDKLMSRCTKCNGMFIQKPLTTEEAVEAAK 189

Query: 181 GFQIIPNCLFNRNVEFWQCMDCNQLYWEGTQYQNALQKFIDVCNLKN 321
           GFQ IPNCLFN+N+EFW+CMDC+QLYWEGTQY NA+QKF+D+C L +
Sbjct: 190 GFQKIPNCLFNKNLEFWKCMDCHQLYWEGTQYHNAVQKFVDICKLSD 236


>ref|XP_002461920.1| hypothetical protein SORBIDRAFT_02g010640 [Sorghum bicolor]
           gi|241925297|gb|EER98441.1| hypothetical protein
           SORBIDRAFT_02g010640 [Sorghum bicolor]
          Length = 505

 Score =  182 bits (463), Expect = 2e-44
 Identities = 83/107 (77%), Positives = 94/107 (87%)
 Frame = +1

Query: 1   LIANQIYLVKSLLKDDQLLEVIQKFQLKISKTQLMSRCTKCNGSFIQKPLTTEEAVEAAK 180
           L  NQ+Y VKSLLK DQL EVI  FQLKIS+ QLMSRCTKCNGSFIQKPLT EEAVEA+K
Sbjct: 399 LAGNQVYRVKSLLKHDQLAEVINTFQLKISEDQLMSRCTKCNGSFIQKPLTLEEAVEASK 458

Query: 181 GFQIIPNCLFNRNVEFWQCMDCNQLYWEGTQYQNALQKFIDVCNLKN 321
           GFQ+IP+CLFNRN+EFW+C DCNQLYWEGTQY NA+QKF+ VCN+ +
Sbjct: 459 GFQVIPSCLFNRNLEFWKCTDCNQLYWEGTQYHNAVQKFLSVCNISD 505


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