BLASTX nr result

ID: Coptis25_contig00008324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008324
         (968 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530693.1| conserved hypothetical protein [Ricinus comm...   309   7e-82
ref|XP_004143447.1| PREDICTED: IMPACT family member in pol 5'reg...   306   6e-81
ref|NP_001242306.1| uncharacterized protein LOC100820330 [Glycin...   290   5e-76
ref|XP_002310870.1| predicted protein [Populus trichocarpa] gi|2...   289   6e-76
ref|XP_003574639.1| PREDICTED: IMPACT family member in pol 5'reg...   282   1e-73

>ref|XP_002530693.1| conserved hypothetical protein [Ricinus communis]
           gi|223529749|gb|EEF31688.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 237

 Score =  309 bits (791), Expect = 7e-82
 Identities = 150/204 (73%), Positives = 178/204 (87%), Gaps = 1/204 (0%)
 Frame = -1

Query: 770 TNGSDSSSYTGITEQVTFEREIKKSKFIAIAGSITHEHSAHSFLNQVKDTRATHNCWAYK 591
           T  S  +++T I E+VTFEREIKKSKFIAIAG I+ E SA SFL+QVKD RATHNCWAYK
Sbjct: 34  TMSSSGNAFTTIKERVTFEREIKKSKFIAIAGPISDEQSAFSFLSQVKDPRATHNCWAYK 93

Query: 590 LGDQYRCNDDGEPSGTAGKPIYSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVAS 411
           +GDQ+R NDDGEPSGTAGKPI SAI SSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVAS
Sbjct: 94  VGDQFRSNDDGEPSGTAGKPIQSAIDSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVAS 153

Query: 410 ECLKNATTCLVKSKVSISMEVPYDLLGVVYHQIQSFQVQDVMQDYDTSNEGVT-VSFKVD 234
           ECL+NA TCLVKSK+ + +EVP+DL+G+++HQ+QSFQV ++MQDY+T  +G+  VSFKVD
Sbjct: 154 ECLRNAPTCLVKSKIPMGIEVPFDLIGILHHQLQSFQVDNIMQDYETGKDGIAMVSFKVD 213

Query: 233 YDKVDSLENAVKANCSRQIVVVKR 162
           +D+V+ LE+A+KANCSR IV  KR
Sbjct: 214 FDQVEKLEDAIKANCSRDIVFYKR 237


>ref|XP_004143447.1| PREDICTED: IMPACT family member in pol 5'region-like [Cucumis
           sativus] gi|449518849|ref|XP_004166448.1| PREDICTED:
           IMPACT family member in pol 5'region-like [Cucumis
           sativus]
          Length = 248

 Score =  306 bits (783), Expect = 6e-81
 Identities = 151/210 (71%), Positives = 181/210 (86%), Gaps = 5/210 (2%)
 Frame = -1

Query: 776 MVTNGSDSS----SYTGITEQVTFEREIKKSKFIAIAGSITHEHSAHSFLNQVKDTRATH 609
           MV   S S+    +YT I E V FE+EIKKSKFIAIAG ++ E SA SFL+QV+D RATH
Sbjct: 39  MVATASSSTPNAGAYTTIKEIVRFEKEIKKSKFIAIAGPVSSEQSAFSFLSQVRDPRATH 98

Query: 608 NCWAYKLGDQYRCNDDGEPSGTAGKPIYSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRA 429
           NCWAY++GDQYR NDDGEPSGTAGKPI+SAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRA
Sbjct: 99  NCWAYQVGDQYRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRA 158

Query: 428 YGGVASECLKNATTCLVKSKVSISMEVPYDLLGVVYHQIQSFQVQDVMQDYDTSNEGVT- 252
           YGGVASECLK+A TC+VKSKV + +EVP+DLLGV+YHQ+QSFQV+D+ QDYD+  +G+T 
Sbjct: 159 YGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITM 218

Query: 251 VSFKVDYDKVDSLENAVKANCSRQIVVVKR 162
           V+FKVD+D V+ LE+A+K+NCSR++V  KR
Sbjct: 219 VTFKVDFDCVEKLEDAIKSNCSRELVFYKR 248


>ref|NP_001242306.1| uncharacterized protein LOC100820330 [Glycine max]
           gi|255641591|gb|ACU21068.1| unknown [Glycine max]
          Length = 236

 Score =  290 bits (741), Expect = 5e-76
 Identities = 138/204 (67%), Positives = 174/204 (85%), Gaps = 1/204 (0%)
 Frame = -1

Query: 770 TNGSDSSSYTGITEQVTFEREIKKSKFIAIAGSITHEHSAHSFLNQVKDTRATHNCWAYK 591
           ++ +   ++T + E+VTFE+EIKKSKFIAIAG I  E SA SFL+QV+D RATHNCWAYK
Sbjct: 33  SSSNPGGAFTTLQERVTFEKEIKKSKFIAIAGPIPDEKSAMSFLSQVRDPRATHNCWAYK 92

Query: 590 LGDQYRCNDDGEPSGTAGKPIYSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVAS 411
           +GDQYR NDDGEPSGTAGKPI +AI SSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVAS
Sbjct: 93  VGDQYRSNDDGEPSGTAGKPIQTAIDSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVAS 152

Query: 410 ECLKNATTCLVKSKVSISMEVPYDLLGVVYHQIQSFQVQDVMQDYDTSNEGVT-VSFKVD 234
           ECL+NA TCLVK+KV + +EVP++L+GV+ HQ+QSF  +D+ QDYDT  +G++ V+FKVD
Sbjct: 153 ECLRNAPTCLVKTKVPMGVEVPFELVGVLNHQLQSFHAEDIKQDYDTGKDGISMVTFKVD 212

Query: 233 YDKVDSLENAVKANCSRQIVVVKR 162
           +D+ + LE+A++ANCSR++   +R
Sbjct: 213 FDQAEKLEDAIEANCSRELQFYRR 236


>ref|XP_002310870.1| predicted protein [Populus trichocarpa] gi|222853773|gb|EEE91320.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score =  289 bits (740), Expect = 6e-76
 Identities = 144/216 (66%), Positives = 174/216 (80%), Gaps = 11/216 (5%)
 Frame = -1

Query: 776 MVTNGSDSS----------SYTGITEQVTFEREIKKSKFIAIAGSITHEHSAHSFLNQVK 627
           MVTN + ++           Y  I E+V+ E+EIKKSKFIAIA  I+ E SA SFL++V+
Sbjct: 1   MVTNAASATITASSSINHGEYRSIAERVSLEKEIKKSKFIAIAAPISDEESAFSFLSEVR 60

Query: 626 DTRATHNCWAYKLGDQYRCNDDGEPSGTAGKPIYSAIVSSGIDRVMVVVIRYFGGIKLGT 447
           D RATHNCWA+K+G   RCNDDGEPSGTAGKPI SAI+SS IDRVMVVVIRYFGGIKLGT
Sbjct: 61  DPRATHNCWAFKVGQHSRCNDDGEPSGTAGKPIQSAILSSHIDRVMVVVIRYFGGIKLGT 120

Query: 446 GGLVRAYGGVASECLKNATTCLVKSKVSISMEVPYDLLGVVYHQIQSFQVQDVMQDYDTS 267
           GGLVRAYGGV SECL+NA TCLVKSKV +++EVP+DLLG+V HQ+Q FQV+D+ QDY+T 
Sbjct: 121 GGLVRAYGGVTSECLRNAPTCLVKSKVPMAVEVPFDLLGLVQHQLQHFQVEDIKQDYETG 180

Query: 266 NEG-VTVSFKVDYDKVDSLENAVKANCSRQIVVVKR 162
            +G   +SFKVD+D+V+ LENAVKANCSRQ+V  K+
Sbjct: 181 KDGFAMISFKVDFDQVEKLENAVKANCSRQLVFYKQ 216


>ref|XP_003574639.1| PREDICTED: IMPACT family member in pol 5'region-like [Brachypodium
           distachyon]
          Length = 245

 Score =  282 bits (721), Expect = 1e-73
 Identities = 137/196 (69%), Positives = 163/196 (83%), Gaps = 1/196 (0%)
 Frame = -1

Query: 761 SDSSSYTGITEQVTFEREIKKSKFIAIAGSITHEHSAHSFLNQVKDTRATHNCWAYKLGD 582
           S  S YT +  +V  EREIK+SKFIAIAG++  E +A SFL++VKD RATHNCWAYK+G+
Sbjct: 46  SSPSPYTALVGRVRCEREIKRSKFIAIAGTVHDERAAMSFLDEVKDPRATHNCWAYKVGE 105

Query: 581 QYRCNDDGEPSGTAGKPIYSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECL 402
           Q+R NDDGEPS TAGKPIYSAI+SSGID VMVVVIRYFGGIKLGTGGLVRAYGGVASECL
Sbjct: 106 QFRYNDDGEPSSTAGKPIYSAIISSGIDMVMVVVIRYFGGIKLGTGGLVRAYGGVASECL 165

Query: 401 KNATTCLVKSKVSISMEVPYDLLGVVYHQIQSFQVQDVMQDYDTSNEG-VTVSFKVDYDK 225
           K+A TCLVK K  + MEVP+DLLG VYHQ+Q FQ +D+ QDYDT  +G V V FKV+Y+K
Sbjct: 166 KDAPTCLVKPKALVGMEVPFDLLGTVYHQLQHFQAEDIKQDYDTGKDGAVVVMFKVEYEK 225

Query: 224 VDSLENAVKANCSRQI 177
           ++SL +AV + CSR+I
Sbjct: 226 IESLGSAVNSACSRKI 241


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