BLASTX nr result

ID: Coptis25_contig00008320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008320
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10
emb|CBI40164.3| unnamed protein product [Vitis vinifera]               67   2e-09
ref|XP_002317261.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
emb|CBI28933.3| unnamed protein product [Vitis vinifera]               60   1e-07

>ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|222833916|gb|EEE72393.1|
           predicted protein [Populus trichocarpa]
          Length = 477

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 33/104 (31%), Positives = 51/104 (49%)
 Frame = +2

Query: 8   GKIPCPCPRRSTQVFVEGALHWMASEYDESELIIAFDVGKEEFQIIQLPPDYNPDSXXXX 187
           G +  P   R    FV G LHW+ ++  +SE I   + G+E FQ +  PP   P+     
Sbjct: 217 GALSPPIDMRCHNAFVGGCLHWIVNDPSKSEFIYCLEFGRELFQPVAAPPHLGPND-KDR 275

Query: 188 XXXXXXXXXXXXXXXFSHLSDDRCEVWVMKEYGVRDSWTKEYVI 319
                          F +   D  ++WVMK+YGV++SWTKE+++
Sbjct: 276 TGDMMLGVLGGCLYFFDYPLGDSFDIWVMKQYGVQESWTKEFIL 319


>emb|CBI40164.3| unnamed protein product [Vitis vinifera]
          Length = 423

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
 Frame = +2

Query: 14  IPCPCPRRSTQVFVEGALHWMASEYDESE----LIIAFDVGKEEFQIIQLPPDYNPDSXX 181
           I C      ++ F+ GALHW+A + +E +    LI++FD+ K+ F+ I LP D+  D   
Sbjct: 210 ICCYIHSNVSRTFINGALHWLAGKKNEMDNTDNLILSFDMAKDVFKEIMLP-DFGYDELI 268

Query: 182 XXXXXXXXXXXXXXXXXFSHLSDDRCEVWVMKEYGVRDSWTKEYVISRKV 331
                              H S++ C+VWVM+EYGV  SWTK + I  ++
Sbjct: 269 RKCLADYKGSLSVLFYDAYH-SNENCDVWVMEEYGVAKSWTKHFTIRHEI 317


>ref|XP_002317261.1| predicted protein [Populus trichocarpa] gi|222860326|gb|EEE97873.1|
           predicted protein [Populus trichocarpa]
          Length = 410

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 34/109 (31%), Positives = 59/109 (54%), Gaps = 2/109 (1%)
 Frame = +2

Query: 5   LGKIPCPCPRRSTQVFVEGALHWMAS--EYDESELIIAFDVGKEEFQIIQLPPDYNPDSX 178
           +G+IP P  ++   V + GALHW+ +  +Y++++LI A D+  ++ + +  P  +  D+ 
Sbjct: 223 IGEIPFPDCKKFFGVSLNGALHWILNLDDYEDADLICALDIDSKKIRPMSPPNGFRRDTT 282

Query: 179 XXXXXXXXXXXXXXXXXXFSHLSDDRCEVWVMKEYGVRDSWTKEYVISR 325
                               +L     ++WVMKEYGV+DSWTKE VI++
Sbjct: 283 EMTLGVLRDCLFICDSMTLYNL-----DIWVMKEYGVKDSWTKEIVIAK 326


>ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 37/99 (37%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
 Frame = +2

Query: 23  PCPRRSTQVFVEGALHWMAS-----EYDESELIIAFDVGKEEFQIIQLPPDYNPDSXXXX 187
           P  RR   VF   A+HW A+     + + S+LI+AFD+G EEF+II   PDY+ +     
Sbjct: 208 PRCRRGYGVFANSAVHWKATVVGKGKENGSDLIVAFDLGAEEFKIIP-QPDYSSNEHEMN 266

Query: 188 XXXXXXXXXXXXXXXFSHLSDDRCEVWVMKEYGVRDSWT 304
                          F + +  + E+WVMKEYGV++SWT
Sbjct: 267 VGVLGGCLCV-----FCNKNCKQVEIWVMKEYGVKESWT 300


>emb|CBI28933.3| unnamed protein product [Vitis vinifera]
          Length = 423

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
 Frame = +2

Query: 11  KIPCPCPRRSTQVFVEGALHWMASEYDES-----ELIIAFDVGKEEFQIIQLPPDYNPDS 175
           K+ C      ++ FV GALHW+A++ ++      +LI++FD+ ++  + + LP ++  D 
Sbjct: 212 KVHCHIHDTVSRTFVNGALHWLAAKKNQGRGKSDDLILSFDMVEDNLREMILP-EFGYDE 270

Query: 176 XXXXXXXXXXXXXXXXXXXFSHLSDDRCEVWVMKEYGVRDSWTKEY 313
                               +H  +D C++WVM EYGV  SWTK +
Sbjct: 271 SSTQKCLADYKGLLSVLVYNAHRCNDNCDIWVMDEYGVASSWTKRF 316


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