BLASTX nr result

ID: Coptis25_contig00008313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008313
         (581 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531383.1| PREDICTED: uncharacterized protein LOC100785...   138   8e-31
ref|XP_002279833.1| PREDICTED: uncharacterized protein LOC100245...   137   2e-30
ref|NP_001237145.1| uncharacterized protein LOC100306075 [Glycin...   133   2e-29
ref|XP_002310603.1| predicted protein [Populus trichocarpa] gi|2...   133   2e-29
ref|XP_002307131.1| predicted protein [Populus trichocarpa] gi|1...   132   4e-29

>ref|XP_003531383.1| PREDICTED: uncharacterized protein LOC100785896 isoform 1 [Glycine
           max]
          Length = 102

 Score =  138 bits (347), Expect = 8e-31
 Identities = 68/99 (68%), Positives = 78/99 (78%), Gaps = 6/99 (6%)
 Frame = -1

Query: 530 KERNAPWMSVPQFGDWDQKGNLPDYSMDFSKIREMRKQNKRDPSRASLGNEEEF------ 369
           KE+NAPW+SVPQFGDWDQKG +PDYS+DFSKIRE RKQNK + SRASLGNEEEF      
Sbjct: 5   KEKNAPWLSVPQFGDWDQKGQVPDYSLDFSKIRETRKQNKTNISRASLGNEEEFMDSTTS 64

Query: 368 SAQPDSHSQLNQQPHHDDKQHSPIARKSILSYFNCCVKA 252
           S+   +HS  + QPH+  + HSP ARKS LSYFNCCVKA
Sbjct: 65  SSVNTAHSSEHPQPHY-HQTHSPTARKSFLSYFNCCVKA 102


>ref|XP_002279833.1| PREDICTED: uncharacterized protein LOC100245593 [Vitis vinifera]
           gi|296082508|emb|CBI21513.3| unnamed protein product
           [Vitis vinifera]
          Length = 98

 Score =  137 bits (344), Expect = 2e-30
 Identities = 65/94 (69%), Positives = 74/94 (78%), Gaps = 1/94 (1%)
 Frame = -1

Query: 530 KERNAPWMSVPQFGDWDQKGNLPDYSMDFSKIREMRKQNKRDPSRASLGNEEEFSAQPDS 351
           KE+ APW+SVPQFGDWDQKG +PDYS+DFSKIREMRKQNKRD SRASLGNEEE  A P +
Sbjct: 5   KEKAAPWLSVPQFGDWDQKGQVPDYSLDFSKIREMRKQNKRDVSRASLGNEEELVAPPTT 64

Query: 350 HSQLNQQPHHDDKQ-HSPIARKSILSYFNCCVKA 252
           ++   Q  HH   Q HSP  R+SIL  F+CCVKA
Sbjct: 65  NADTRQTDHHHYHQSHSPTGRRSILGCFSCCVKA 98


>ref|NP_001237145.1| uncharacterized protein LOC100306075 [Glycine max]
           gi|255627455|gb|ACU14072.1| unknown [Glycine max]
          Length = 102

 Score =  133 bits (335), Expect = 2e-29
 Identities = 66/99 (66%), Positives = 76/99 (76%), Gaps = 6/99 (6%)
 Frame = -1

Query: 530 KERNAPWMSVPQFGDWDQKGNLPDYSMDFSKIREMRKQNKRDPSRASLGNEEEF------ 369
           KE+N PW+SVPQFGDWDQKG +PDYS+DFSKIRE RKQNK + SRASLGNEEEF      
Sbjct: 5   KEKNGPWLSVPQFGDWDQKGQVPDYSLDFSKIRETRKQNKTNISRASLGNEEEFMDSTTS 64

Query: 368 SAQPDSHSQLNQQPHHDDKQHSPIARKSILSYFNCCVKA 252
           S+    HS  + QPH+  + +SP ARKS LSYFNCCVKA
Sbjct: 65  SSVNTGHSSEHPQPHY-HQTNSPTARKSFLSYFNCCVKA 102


>ref|XP_002310603.1| predicted protein [Populus trichocarpa] gi|222853506|gb|EEE91053.1|
           predicted protein [Populus trichocarpa]
          Length = 107

 Score =  133 bits (335), Expect = 2e-29
 Identities = 64/99 (64%), Positives = 75/99 (75%), Gaps = 7/99 (7%)
 Frame = -1

Query: 527 ERNAPWMSVPQFGDWDQKGNLPDYSMDFSKIREMRKQNKRDPSRASLGNEEEF------S 366
           ++NAPW+SVPQFGDWDQKG LPDYS+DFSKIREMRKQNK+D SRASLGNEEE       +
Sbjct: 7   QKNAPWLSVPQFGDWDQKGELPDYSLDFSKIREMRKQNKKDVSRASLGNEEELINPTATA 66

Query: 365 AQPDSHSQLNQQPH-HDDKQHSPIARKSILSYFNCCVKA 252
           A+P      ++  H H+   HSP  R+SI SYFNCCVKA
Sbjct: 67  AKPAQTQDHHRHHHYHEGHHHSPTTRRSIFSYFNCCVKA 105


>ref|XP_002307131.1| predicted protein [Populus trichocarpa] gi|118483863|gb|ABK93822.1|
           unknown [Populus trichocarpa]
           gi|222856580|gb|EEE94127.1| predicted protein [Populus
           trichocarpa]
          Length = 103

 Score =  132 bits (332), Expect = 4e-29
 Identities = 66/101 (65%), Positives = 72/101 (71%), Gaps = 9/101 (8%)
 Frame = -1

Query: 527 ERNAPWMSVPQFGDWDQKGNLPDYSMDFSKIREMRKQNKRDPSRASLGNEEEF------- 369
           ++NAPW+SVPQFGDWDQKG LPDYS+DFSKIREMRKQNKRD SRASLG EEE        
Sbjct: 7   QKNAPWLSVPQFGDWDQKGELPDYSVDFSKIREMRKQNKRDASRASLGKEEELINPTATT 66

Query: 368 --SAQPDSHSQLNQQPHHDDKQHSPIARKSILSYFNCCVKA 252
             +AQ   H     Q HHD    SP  R+SI SYFNCCVKA
Sbjct: 67  AKTAQTHDHRHHYHQDHHD----SPATRRSIFSYFNCCVKA 103


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