BLASTX nr result

ID: Coptis25_contig00008305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008305
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC43323.1| putative alpha7 proteasome subunit [Nicotiana ta...   229   1e-58
ref|XP_002456512.1| hypothetical protein SORBIDRAFT_03g037640 [S...   229   2e-58
ref|NP_001169594.1| uncharacterized protein LOC100383475 [Zea ma...   229   2e-58
gb|AFK43516.1| unknown [Lotus japonicus]                              228   4e-58
gb|AFK35817.1| unknown [Lotus japonicus]                              228   4e-58

>emb|CAC43323.1| putative alpha7 proteasome subunit [Nicotiana tabacum]
          Length = 249

 Score =  229 bits (585), Expect = 1e-58
 Identities = 108/114 (94%), Positives = 112/114 (98%)
 Frame = -1

Query: 344 EATNYERTYGEPIPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPS 165
           EATNYE TYGEPI VKELA+RVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYM+EPS
Sbjct: 95  EATNYESTYGEPILVKELAERVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMVEPS 154

Query: 164 GVSYRYFGAAIGKGRQAAKTEIEKLKLSEMTCREGVVEVAKIIYGVHDEAKDKA 3
           GVSYRYFGAAIGKGRQAAKTEIEKLKLSEMTCR+GV+EVAKIIYGVHDEAKDKA
Sbjct: 155 GVSYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDEAKDKA 208


>ref|XP_002456512.1| hypothetical protein SORBIDRAFT_03g037640 [Sorghum bicolor]
           gi|241928487|gb|EES01632.1| hypothetical protein
           SORBIDRAFT_03g037640 [Sorghum bicolor]
          Length = 249

 Score =  229 bits (583), Expect = 2e-58
 Identities = 106/114 (92%), Positives = 112/114 (98%)
 Frame = -1

Query: 344 EATNYERTYGEPIPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPS 165
           EA +YE+ YGEPIPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPS
Sbjct: 95  EAASYEKVYGEPIPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPS 154

Query: 164 GVSYRYFGAAIGKGRQAAKTEIEKLKLSEMTCREGVVEVAKIIYGVHDEAKDKA 3
           GVSY+YFGAA+GKGRQAAKTEIEKLKLSE+TCREG+VEVAKIIYGVHDEAKDKA
Sbjct: 155 GVSYKYFGAALGKGRQAAKTEIEKLKLSELTCREGIVEVAKIIYGVHDEAKDKA 208


>ref|NP_001169594.1| uncharacterized protein LOC100383475 [Zea mays]
           gi|195657431|gb|ACG48183.1| proteasome subunit alpha
           type 3 [Zea mays] gi|224030269|gb|ACN34210.1| unknown
           [Zea mays] gi|414591027|tpg|DAA41598.1| TPA: proteasome
           subunit alpha type [Zea mays]
          Length = 249

 Score =  229 bits (583), Expect = 2e-58
 Identities = 106/114 (92%), Positives = 112/114 (98%)
 Frame = -1

Query: 344 EATNYERTYGEPIPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPS 165
           EA +YE+ YGEPIPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPS
Sbjct: 95  EAASYEKVYGEPIPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPS 154

Query: 164 GVSYRYFGAAIGKGRQAAKTEIEKLKLSEMTCREGVVEVAKIIYGVHDEAKDKA 3
           GVSY+YFGAA+GKGRQAAKTEIEKLKLSE+TCREG+VEVAKIIYGVHDEAKDKA
Sbjct: 155 GVSYKYFGAALGKGRQAAKTEIEKLKLSELTCREGIVEVAKIIYGVHDEAKDKA 208


>gb|AFK43516.1| unknown [Lotus japonicus]
          Length = 249

 Score =  228 bits (581), Expect = 4e-58
 Identities = 105/113 (92%), Positives = 111/113 (98%)
 Frame = -1

Query: 344 EATNYERTYGEPIPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPS 165
           EA NY+ TYGEPIPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYM+EPS
Sbjct: 95  EANNYDSTYGEPIPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMVEPS 154

Query: 164 GVSYRYFGAAIGKGRQAAKTEIEKLKLSEMTCREGVVEVAKIIYGVHDEAKDK 6
           GVSYRYFGAAIGKGRQAAKTEIEKLKL++MTCR+GV+EVAKIIYGVHDEAKDK
Sbjct: 155 GVSYRYFGAAIGKGRQAAKTEIEKLKLADMTCRQGVIEVAKIIYGVHDEAKDK 207


>gb|AFK35817.1| unknown [Lotus japonicus]
          Length = 249

 Score =  228 bits (581), Expect = 4e-58
 Identities = 105/113 (92%), Positives = 111/113 (98%)
 Frame = -1

Query: 344 EATNYERTYGEPIPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPS 165
           EA NY+ TYGEPIPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYM+EPS
Sbjct: 95  EANNYDSTYGEPIPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMVEPS 154

Query: 164 GVSYRYFGAAIGKGRQAAKTEIEKLKLSEMTCREGVVEVAKIIYGVHDEAKDK 6
           GVSYRYFGAAIGKGRQAAKTEIEKLKL++MTCR+GV+EVAKIIYGVHDEAKDK
Sbjct: 155 GVSYRYFGAAIGKGRQAAKTEIEKLKLADMTCRQGVIEVAKIIYGVHDEAKDK 207


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