BLASTX nr result

ID: Coptis25_contig00008296 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008296
         (1954 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263508.2| PREDICTED: uncharacterized protein LOC100240...   360   e-156
emb|CBI29366.3| unnamed protein product [Vitis vinifera]              360   e-155
ref|XP_003535559.1| PREDICTED: uncharacterized protein LOC100820...   330   e-149
ref|XP_002527086.1| conserved hypothetical protein [Ricinus comm...   333   e-149
ref|XP_003556168.1| PREDICTED: 30S ribosomal protein S1-like [Gl...   332   e-144

>ref|XP_002263508.2| PREDICTED: uncharacterized protein LOC100240915 [Vitis vinifera]
          Length = 513

 Score =  360 bits (925), Expect(2) = e-156
 Identities = 176/222 (79%), Positives = 205/222 (92%)
 Frame = -1

Query: 1060 EIKQLNEPIEVRITEWNTGGLLTRIEGLRAFLPKAELMNRVNNFTDLKENVGRQIYVQIS 881
            +IKQLNEPIEVRITEWNTGGLLTRIEGLRAFLPKAEL+NRV +FT+LKENVGR++YVQI+
Sbjct: 288  QIKQLNEPIEVRITEWNTGGLLTRIEGLRAFLPKAELLNRVKSFTELKENVGRRLYVQIT 347

Query: 880  RIDEASNDLILSERDAWDMMYLKEGTLLDGTVQKIFPYGAQVRIGDTNRSGLLHISNISR 701
            RIDEA NDLILSE+DAW+  +L+EGTLL+GTV+KIFPYGAQ+ IG++NRSGLLHISNI+R
Sbjct: 348  RIDEAKNDLILSEKDAWEKSHLQEGTLLEGTVKKIFPYGAQIMIGESNRSGLLHISNITR 407

Query: 700  ARINSVSDILTLDEEVKVLVVKSQFPDKISLSIADLESEPGLFLSNREKVFSEAEEMAKK 521
            AR+ SVSD+LT+DE+VKV+VVKS FP+KI+LSIADLESEPGLFLSN+EKVFS+AEEMAKK
Sbjct: 408  ARVTSVSDLLTVDEKVKVMVVKSMFPNKIALSIADLESEPGLFLSNKEKVFSDAEEMAKK 467

Query: 520  YRRKLPAGAAVSTNRKLGPLPTDVLPFDDEEKLYANWKWFKF 395
            YR+KLP   AV+  RKL PLPTD LPF DE  LYANW+WFKF
Sbjct: 468  YRQKLP---AVTATRKLEPLPTDALPFHDEASLYANWRWFKF 506



 Score =  219 bits (557), Expect(2) = e-156
 Identities = 121/230 (52%), Positives = 149/230 (64%), Gaps = 10/230 (4%)
 Frame = -2

Query: 1716 SSQVGFCSLNE---EILSAQVSERXXXXXXXXXXXXXXXXXXXPI-----TSTEVVTEPV 1561
            ++Q+ FCS N+   +I S Q+ E                    P+     +++++ +E  
Sbjct: 58   TTQISFCSPNDIFYDISSTQLPETPEIDGVQDIEELELLGKPSPVPLNNGSASDIDSELK 117

Query: 1560 KPERDEVLAPFLKFFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXE--YYEPKPGDFVVGV 1387
            KP++DE LAPFLKFF                                YYEPKPGDFVVGV
Sbjct: 118  KPDKDEALAPFLKFFKPRESSEEANGASGEDGSEISESGSTKLVSVEYYEPKPGDFVVGV 177

Query: 1386 VVSGNGHKIDVNIGADLLGTMLTKEVLPLYDKELPYLLCDFGKDAEEFMVRGKIGIVFDE 1207
            VVSGN +K+DVN+GADLLGTMLTKEVLPLYDKE+ YLLCD  KDAEEFMV GK+ IV ++
Sbjct: 178  VVSGNENKLDVNVGADLLGTMLTKEVLPLYDKEMEYLLCDVEKDAEEFMVHGKMSIVRND 237

Query: 1206 DAVNGEPVPGRPVVETGTILFAEVLGRTLSGRPLLSTRRLFRRVSWHRVR 1057
            DA++  P+ G PVVETGT+LFAEVLGRTLSGRPLLSTRR FRR++WHRVR
Sbjct: 238  DALSRVPMQGSPVVETGTVLFAEVLGRTLSGRPLLSTRRFFRRIAWHRVR 287


>emb|CBI29366.3| unnamed protein product [Vitis vinifera]
          Length = 435

 Score =  360 bits (925), Expect(2) = e-155
 Identities = 176/222 (79%), Positives = 205/222 (92%)
 Frame = -1

Query: 1060 EIKQLNEPIEVRITEWNTGGLLTRIEGLRAFLPKAELMNRVNNFTDLKENVGRQIYVQIS 881
            +IKQLNEPIEVRITEWNTGGLLTRIEGLRAFLPKAEL+NRV +FT+LKENVGR++YVQI+
Sbjct: 210  QIKQLNEPIEVRITEWNTGGLLTRIEGLRAFLPKAELLNRVKSFTELKENVGRRLYVQIT 269

Query: 880  RIDEASNDLILSERDAWDMMYLKEGTLLDGTVQKIFPYGAQVRIGDTNRSGLLHISNISR 701
            RIDEA NDLILSE+DAW+  +L+EGTLL+GTV+KIFPYGAQ+ IG++NRSGLLHISNI+R
Sbjct: 270  RIDEAKNDLILSEKDAWEKSHLQEGTLLEGTVKKIFPYGAQIMIGESNRSGLLHISNITR 329

Query: 700  ARINSVSDILTLDEEVKVLVVKSQFPDKISLSIADLESEPGLFLSNREKVFSEAEEMAKK 521
            AR+ SVSD+LT+DE+VKV+VVKS FP+KI+LSIADLESEPGLFLSN+EKVFS+AEEMAKK
Sbjct: 330  ARVTSVSDLLTVDEKVKVMVVKSMFPNKIALSIADLESEPGLFLSNKEKVFSDAEEMAKK 389

Query: 520  YRRKLPAGAAVSTNRKLGPLPTDVLPFDDEEKLYANWKWFKF 395
            YR+KLP   AV+  RKL PLPTD LPF DE  LYANW+WFKF
Sbjct: 390  YRQKLP---AVTATRKLEPLPTDALPFHDEASLYANWRWFKF 428



 Score =  217 bits (553), Expect(2) = e-155
 Identities = 111/180 (61%), Positives = 132/180 (73%), Gaps = 2/180 (1%)
 Frame = -2

Query: 1590 TSTEVVTEPVKPERDEVLAPFLKFFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXE--YYE 1417
            +++++ +E  KP++DE LAPFLKFF                                YYE
Sbjct: 30   SASDIDSELKKPDKDEALAPFLKFFKPRESSEEANGASGEDGSEISESGSTKLVSVEYYE 89

Query: 1416 PKPGDFVVGVVVSGNGHKIDVNIGADLLGTMLTKEVLPLYDKELPYLLCDFGKDAEEFMV 1237
            PKPGDFVVGVVVSGN +K+DVN+GADLLGTMLTKEVLPLYDKE+ YLLCD  KDAEEFMV
Sbjct: 90   PKPGDFVVGVVVSGNENKLDVNVGADLLGTMLTKEVLPLYDKEMEYLLCDVEKDAEEFMV 149

Query: 1236 RGKIGIVFDEDAVNGEPVPGRPVVETGTILFAEVLGRTLSGRPLLSTRRLFRRVSWHRVR 1057
             GK+ IV ++DA++  P+ G PVVETGT+LFAEVLGRTLSGRPLLSTRR FRR++WHRVR
Sbjct: 150  HGKMSIVRNDDALSRVPMQGSPVVETGTVLFAEVLGRTLSGRPLLSTRRFFRRIAWHRVR 209


>ref|XP_003535559.1| PREDICTED: uncharacterized protein LOC100820145 [Glycine max]
          Length = 513

 Score =  330 bits (846), Expect(2) = e-149
 Identities = 162/222 (72%), Positives = 194/222 (87%)
 Frame = -1

Query: 1060 EIKQLNEPIEVRITEWNTGGLLTRIEGLRAFLPKAELMNRVNNFTDLKENVGRQIYVQIS 881
            +IKQLNEPIEVRITEWNTGGLLTRIEGLRAFLPKAEL+ R N+FT+LKENVG ++YVQI+
Sbjct: 294  QIKQLNEPIEVRITEWNTGGLLTRIEGLRAFLPKAELVKRANSFTELKENVGCRMYVQIT 353

Query: 880  RIDEASNDLILSERDAWDMMYLKEGTLLDGTVQKIFPYGAQVRIGDTNRSGLLHISNISR 701
            +IDE  N+LILSER+AW  +YL+EGTLLDGTV+KI PYGAQ+++G TNRSGLLH+SNISR
Sbjct: 354  QIDETKNNLILSEREAWQKLYLREGTLLDGTVKKILPYGAQIKLGKTNRSGLLHVSNISR 413

Query: 700  ARINSVSDILTLDEEVKVLVVKSQFPDKISLSIADLESEPGLFLSNREKVFSEAEEMAKK 521
            A + SVS+IL++DE VK LVVKS FPDKISLSIADLESEPGLFLSN+E+V+ EA+ MAKK
Sbjct: 414  AEVTSVSNILSVDENVKALVVKSMFPDKISLSIADLESEPGLFLSNKERVYMEADMMAKK 473

Query: 520  YRRKLPAGAAVSTNRKLGPLPTDVLPFDDEEKLYANWKWFKF 395
            Y++KLP      T ++L PLPT  LPF++ E LY+NWKWFKF
Sbjct: 474  YKQKLPPSV---TTQRLEPLPTSALPFEN-EALYSNWKWFKF 511



 Score =  227 bits (579), Expect(2) = e-149
 Identities = 116/178 (65%), Positives = 133/178 (74%)
 Frame = -2

Query: 1590 TSTEVVTEPVKPERDEVLAPFLKFFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYYEPK 1411
            +S+EV  E  KP ++E LAPFLKFF                             EYYEPK
Sbjct: 116  SSSEVEVEEEKPSKEEALAPFLKFFKGKDSGQEVEEDGEGLEGENEEGDKKVSVEYYEPK 175

Query: 1410 PGDFVVGVVVSGNGHKIDVNIGADLLGTMLTKEVLPLYDKELPYLLCDFGKDAEEFMVRG 1231
            PGDFVVGVVVSGN +K+DVN+GADLLGTMLTKEVLPLY KE+  LLCD  KDAE+FMV G
Sbjct: 176  PGDFVVGVVVSGNENKLDVNVGADLLGTMLTKEVLPLYGKEMENLLCDVDKDAEDFMVNG 235

Query: 1230 KIGIVFDEDAVNGEPVPGRPVVETGTILFAEVLGRTLSGRPLLSTRRLFRRVSWHRVR 1057
            K+GIV +E+A++G PVPGRPV+E GTILFAEVLGRTLSGRPLLSTRRLFRR++WHRVR
Sbjct: 236  KMGIVKNEEAISGVPVPGRPVLEIGTILFAEVLGRTLSGRPLLSTRRLFRRIAWHRVR 293


>ref|XP_002527086.1| conserved hypothetical protein [Ricinus communis]
            gi|223533509|gb|EEF35249.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 476

 Score =  333 bits (855), Expect(2) = e-149
 Identities = 167/222 (75%), Positives = 197/222 (88%)
 Frame = -1

Query: 1060 EIKQLNEPIEVRITEWNTGGLLTRIEGLRAFLPKAELMNRVNNFTDLKENVGRQIYVQIS 881
            +IK+LNEPIEVRITEWNTGGLLTRIEGLRAFLPKAELMNRV NF +LKENV R+I V I+
Sbjct: 255  QIKELNEPIEVRITEWNTGGLLTRIEGLRAFLPKAELMNRVKNFKELKENVSRRINVLIT 314

Query: 880  RIDEASNDLILSERDAWDMMYLKEGTLLDGTVQKIFPYGAQVRIGDTNRSGLLHISNISR 701
            RI+E +N+LILSER+AW+M+ L+EGTLL+G V+KIFPYGAQVRIG+TNRSGLLHISNI+R
Sbjct: 315  RINEDNNELILSEREAWEMLNLREGTLLEGNVRKIFPYGAQVRIGETNRSGLLHISNITR 374

Query: 700  ARINSVSDILTLDEEVKVLVVKSQFPDKISLSIADLESEPGLFLSNREKVFSEAEEMAKK 521
            +R+ +VSD+L +DE VKVLVVKS FPDKISLSIADLESEPGLF+SN+EKVF+EAEEMAKK
Sbjct: 375  SRVTAVSDLLKVDERVKVLVVKSMFPDKISLSIADLESEPGLFVSNKEKVFAEAEEMAKK 434

Query: 520  YRRKLPAGAAVSTNRKLGPLPTDVLPFDDEEKLYANWKWFKF 395
            YR+KLP  A ++T +   PL +  L FDDE  +YANWKWFKF
Sbjct: 435  YRQKLP--AVLATRKSATPL-SSTLTFDDEATMYANWKWFKF 473



 Score =  223 bits (569), Expect(2) = e-149
 Identities = 130/239 (54%), Positives = 147/239 (61%), Gaps = 16/239 (6%)
 Frame = -2

Query: 1725 SVISSQVGFCSLNE---EILSAQVSERXXXXXXXXXXXXXXXXXXXPIT-----STEVVT 1570
            S +S+Q+ FCS N+    + S QV E                    P+      S EV  
Sbjct: 16   SALSTQISFCSQNDTFDNLSSTQVPEEQEEDRIRENEELELLNKPSPVVINNGLSIEVDK 75

Query: 1569 EPVKPERDEVLAPFLKFFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXE--------YYEP 1414
            E    ++DE LAPFLKFF                             +        YYEP
Sbjct: 76   ESETIDKDEALAPFLKFFEPRDSLEEIKEEGKELGVIEGNSNGNNEDKEAKKVNVDYYEP 135

Query: 1413 KPGDFVVGVVVSGNGHKIDVNIGADLLGTMLTKEVLPLYDKELPYLLCDFGKDAEEFMVR 1234
            KPGDFVVGVVVSGN  K+DVN+GADLLGTMLTKEVLPLYDKE+ YLLCD  KDAE FMVR
Sbjct: 136  KPGDFVVGVVVSGNESKLDVNVGADLLGTMLTKEVLPLYDKEMEYLLCDMEKDAERFMVR 195

Query: 1233 GKIGIVFDEDAVNGEPVPGRPVVETGTILFAEVLGRTLSGRPLLSTRRLFRRVSWHRVR 1057
            GKIGI+ DE A++G P  GRPVVETGTILFAEVLGRTLSGRPLLSTRRLFRR++WHRVR
Sbjct: 196  GKIGIIKDEAAMSGGPGLGRPVVETGTILFAEVLGRTLSGRPLLSTRRLFRRIAWHRVR 254


>ref|XP_003556168.1| PREDICTED: 30S ribosomal protein S1-like [Glycine max]
          Length = 366

 Score =  332 bits (850), Expect(2) = e-144
 Identities = 163/222 (73%), Positives = 195/222 (87%)
 Frame = -1

Query: 1060 EIKQLNEPIEVRITEWNTGGLLTRIEGLRAFLPKAELMNRVNNFTDLKENVGRQIYVQIS 881
            +IKQLNEPIEVRITEWNTGGLLTRIEGLRAFLPKAEL+ R N+FT+LKENVGR +YVQI+
Sbjct: 147  QIKQLNEPIEVRITEWNTGGLLTRIEGLRAFLPKAELVKRANSFTELKENVGRCMYVQIT 206

Query: 880  RIDEASNDLILSERDAWDMMYLKEGTLLDGTVQKIFPYGAQVRIGDTNRSGLLHISNISR 701
            +IDE  N+LILSE++AW  +YL+EGTLLDGTV+KI PYGAQ+++G TNRSGLLH+SNISR
Sbjct: 207  QIDETKNNLILSEKEAWQKLYLREGTLLDGTVKKILPYGAQIKLGKTNRSGLLHVSNISR 266

Query: 700  ARINSVSDILTLDEEVKVLVVKSQFPDKISLSIADLESEPGLFLSNREKVFSEAEEMAKK 521
            A + SVS+IL++DE VKVLVVKS FPDKISLSIADLESEPGLFLSN+E+++ EA+ MAKK
Sbjct: 267  AEVTSVSNILSVDENVKVLVVKSMFPDKISLSIADLESEPGLFLSNKERLYMEADMMAKK 326

Query: 520  YRRKLPAGAAVSTNRKLGPLPTDVLPFDDEEKLYANWKWFKF 395
            Y++KLP      T ++L PLPT  LPF++ E LYANWKWFKF
Sbjct: 327  YKQKLPPSV---TTQRLEPLPTSCLPFEN-EALYANWKWFKF 364



 Score =  208 bits (529), Expect(2) = e-144
 Identities = 101/123 (82%), Positives = 113/123 (91%)
 Frame = -2

Query: 1425 YYEPKPGDFVVGVVVSGNGHKIDVNIGADLLGTMLTKEVLPLYDKELPYLLCDFGKDAEE 1246
            YYE KPGDFVVGVVVSGN +K+DVN+GADLLGTMLTKEVLPLY KE+  LLCD  KDAE+
Sbjct: 24   YYESKPGDFVVGVVVSGNENKLDVNVGADLLGTMLTKEVLPLYGKEMENLLCDVEKDAED 83

Query: 1245 FMVRGKIGIVFDEDAVNGEPVPGRPVVETGTILFAEVLGRTLSGRPLLSTRRLFRRVSWH 1066
            FMVRGK+GIV +E+A++G PVPGRPVVE GTILFAEVLGRTLSGRPLLSTRRLFRR++WH
Sbjct: 84   FMVRGKMGIVKNEEAISGVPVPGRPVVEIGTILFAEVLGRTLSGRPLLSTRRLFRRIAWH 143

Query: 1065 RVR 1057
            RVR
Sbjct: 144  RVR 146


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