BLASTX nr result

ID: Coptis25_contig00008294 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008294
         (1042 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522105.1| conserved hypothetical protein [Ricinus comm...   172   1e-40
ref|XP_002298793.1| predicted protein [Populus trichocarpa] gi|2...   166   9e-39
ref|XP_002276036.1| PREDICTED: uncharacterized protein LOC100251...   162   2e-37
ref|XP_002867158.1| hypothetical protein ARALYDRAFT_491300 [Arab...   159   1e-36
ref|XP_004159921.1| PREDICTED: uncharacterized LOC101213497 [Cuc...   158   2e-36

>ref|XP_002522105.1| conserved hypothetical protein [Ricinus communis]
           gi|223538704|gb|EEF40305.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 200

 Score =  172 bits (436), Expect = 1e-40
 Identities = 91/153 (59%), Positives = 111/153 (72%), Gaps = 1/153 (0%)
 Frame = +2

Query: 185 TRDAGIITDPRNWSSARFTNLVNXXXXXXXXXXXXXXXXXXXXRSLDLLVRFIQNMFRKI 364
           T  + +I DPRNW  +  T+ +                     RSLDL VRFIQN+F+K+
Sbjct: 52  TNTSNLINDPRNWGRSINTSEL----FDDGNDDDEEEEEEEEDRSLDLFVRFIQNVFKKV 107

Query: 365 SKRARKAVRSVLPVSISNKLVGFSVNGVIILAFLWILKAFLEVVCTFGSLVFVSILLIRG 544
           SKRARKA RSVLP+SIS KLVGFSVNGV+ILAFLW+LKAFLEVVCT GS+VFVSILLIRG
Sbjct: 108 SKRARKAARSVLPLSISTKLVGFSVNGVLILAFLWVLKAFLEVVCTLGSVVFVSILLIRG 167

Query: 545 TWSGISYLQDTRHRNSN-IDGENSAWTGAQPAS 640
            WSGI+YLQ++R+   N ++ E+  WTGAQPA+
Sbjct: 168 IWSGITYLQESRYLELNEVEDEHHEWTGAQPAT 200


>ref|XP_002298793.1| predicted protein [Populus trichocarpa] gi|222846051|gb|EEE83598.1|
           predicted protein [Populus trichocarpa]
          Length = 141

 Score =  166 bits (420), Expect = 9e-39
 Identities = 87/144 (60%), Positives = 105/144 (72%), Gaps = 1/144 (0%)
 Frame = +2

Query: 212 PRNWSSARFTNLVNXXXXXXXXXXXXXXXXXXXXRSLDLLVRFIQNMFRKISKRARKAVR 391
           PRNWS +     +N                    RSLDLLVRFI N+F+K+SKRARKAVR
Sbjct: 3   PRNWSRS-----INSDFADDHEDGGDDDEAEEEDRSLDLLVRFISNVFKKVSKRARKAVR 57

Query: 392 SVLPVSISNKLVGFSVNGVIILAFLWILKAFLEVVCTFGSLVFVSILLIRGTWSGISYLQ 571
           SVLPV IS KLV FSVNGV++LAFLW+LKAFLEVVCT GS+VFVSILLIRG WSG++YLQ
Sbjct: 58  SVLPVPISTKLVEFSVNGVLLLAFLWVLKAFLEVVCTLGSMVFVSILLIRGIWSGVTYLQ 117

Query: 572 DTRH-RNSNIDGENSAWTGAQPAS 640
           + R+ R + +D ++ AWTG QPA+
Sbjct: 118 ERRNLRINELDDDHRAWTGTQPAA 141


>ref|XP_002276036.1| PREDICTED: uncharacterized protein LOC100251465 [Vitis vinifera]
           gi|297736403|emb|CBI25126.3| unnamed protein product
           [Vitis vinifera]
          Length = 203

 Score =  162 bits (409), Expect = 2e-37
 Identities = 83/156 (53%), Positives = 106/156 (67%), Gaps = 1/156 (0%)
 Frame = +2

Query: 176 HYYTRDAGIITDPRNWSSARFTNLVNXXXXXXXXXXXXXXXXXXXXRSLDLLVRFIQNMF 355
           H+      ++ DPRNW+  R    V                     RSLDLLVRF+QN+F
Sbjct: 51  HFSQEGDHLVDDPRNWTRNRS---VVAGEYGDDEDEDDEDDEEEEDRSLDLLVRFVQNVF 107

Query: 356 RKISKRARKAVRSVLPVSISNKLVGFSVNGVIILAFLWILKAFLEVVCTFGSLVFVSILL 535
           +KISKR RKAVRSVLPV IS KLVGFSV+GV++L FLW+LKAFLEV+CT GS+VFVSIL+
Sbjct: 108 KKISKRTRKAVRSVLPVPISTKLVGFSVDGVLMLTFLWVLKAFLEVICTLGSVVFVSILV 167

Query: 536 IRGTWSGISYLQDTR-HRNSNIDGENSAWTGAQPAS 640
           IRG W+G+SY+Q+ R H  + +  ++ AWTG QP +
Sbjct: 168 IRGIWTGVSYVQENRNHTGNELGDDHRAWTGTQPTT 203


>ref|XP_002867158.1| hypothetical protein ARALYDRAFT_491300 [Arabidopsis lyrata subsp.
           lyrata] gi|297312994|gb|EFH43417.1| hypothetical protein
           ARALYDRAFT_491300 [Arabidopsis lyrata subsp. lyrata]
          Length = 208

 Score =  159 bits (401), Expect = 1e-36
 Identities = 77/110 (70%), Positives = 94/110 (85%), Gaps = 1/110 (0%)
 Frame = +2

Query: 314 RSLDLLVRFIQNMFRKISKRARKAVRSVLPVSISNKLVGFSVNGVIILAFLWILKAFLEV 493
           RSLDLL+RF++N+FRKISKRARKAVRS+LPVSIS KLVGFSVNGV+ILAFLWILKAFLEV
Sbjct: 99  RSLDLLLRFVENVFRKISKRARKAVRSILPVSISTKLVGFSVNGVLILAFLWILKAFLEV 158

Query: 494 VCTFGSLVFVSILLIRGTWSGISYLQDTRHRNSN-IDGENSAWTGAQPAS 640
            CT G++VF SILLIRG W+G++Y+Q++R+   N +  +  AW G QP S
Sbjct: 159 ACTLGTIVFTSILLIRGLWAGVAYMQESRNNRINELADDPRAWNGVQPVS 208


>ref|XP_004159921.1| PREDICTED: uncharacterized LOC101213497 [Cucumis sativus]
          Length = 202

 Score =  158 bits (400), Expect = 2e-36
 Identities = 81/111 (72%), Positives = 94/111 (84%), Gaps = 2/111 (1%)
 Frame = +2

Query: 314 RSLDLLVRFIQNMFRKISKRARKAVRSVLPVSISNKLVGFSVNGVIILAFLWILKAFLEV 493
           RSLDLLVRF++N+FRK S+RARKAVRSVLP SI  KLV FSVNGV++LAFLW+LKAFLEV
Sbjct: 92  RSLDLLVRFVENIFRKSSRRARKAVRSVLPPSIPTKLVAFSVNGVLMLAFLWVLKAFLEV 151

Query: 494 VCTFGSLVFVSILLIRGTWSGISYLQDTR-HRNSNI-DGENSAWTGAQPAS 640
           +CT G+ VFVSIL+IRG W GI YLQDTR HR   + D ++ AWTGAQPAS
Sbjct: 152 ICTLGTAVFVSILIIRGVWIGILYLQDTRSHRLGQLDDDQHHAWTGAQPAS 202


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