BLASTX nr result
ID: Coptis25_contig00008285
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00008285 (200 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002527682.1| 3-5 exonuclease, putative [Ricinus communis]... 77 1e-12 ref|XP_002323207.1| predicted protein [Populus trichocarpa] gi|2... 77 2e-12 ref|XP_002308852.1| predicted protein [Populus trichocarpa] gi|2... 77 2e-12 ref|XP_004136636.1| PREDICTED: Werner Syndrome-like exonuclease-... 74 9e-12 gb|ADN33882.1| 3'-5' exonuclease [Cucumis melo subsp. melo] 74 9e-12 >ref|XP_002527682.1| 3-5 exonuclease, putative [Ricinus communis] gi|223532913|gb|EEF34681.1| 3-5 exonuclease, putative [Ricinus communis] Length = 211 Score = 77.0 bits (188), Expect = 1e-12 Identities = 33/67 (49%), Positives = 50/67 (74%), Gaps = 1/67 (1%) Frame = +2 Query: 2 YNLGVANILDLRSLAMGK-GFGHLRNSGLKDLAREIVGLVIEKPKRITMSRWDYEWLSYE 178 Y L V N+++LR +A G L+N+GLK+L ++++G I+KPKR+TMSRWD WLS++ Sbjct: 128 YGLSVGNVMELRRVAAESLGVKELKNAGLKELVKQVLGKEIQKPKRVTMSRWDSMWLSHD 187 Query: 179 QISYACV 199 Q+ YAC+ Sbjct: 188 QVQYACL 194 >ref|XP_002323207.1| predicted protein [Populus trichocarpa] gi|222867837|gb|EEF04968.1| predicted protein [Populus trichocarpa] Length = 215 Score = 76.6 bits (187), Expect = 2e-12 Identities = 38/67 (56%), Positives = 47/67 (70%), Gaps = 1/67 (1%) Frame = +2 Query: 2 YNLGVANILDLRSLAMGK-GFGHLRNSGLKDLAREIVGLVIEKPKRITMSRWDYEWLSYE 178 Y L V N +DLR LA K G +NSG+K LARE++G IEKPKRIT+SRWD WL+ Sbjct: 134 YELSVGNAVDLRGLAAEKLGDSRWKNSGVKRLAREVLGKEIEKPKRITLSRWDNPWLTPA 193 Query: 179 QISYACV 199 Q+ YAC+ Sbjct: 194 QVQYACL 200 >ref|XP_002308852.1| predicted protein [Populus trichocarpa] gi|222854828|gb|EEE92375.1| predicted protein [Populus trichocarpa] Length = 215 Score = 76.6 bits (187), Expect = 2e-12 Identities = 36/67 (53%), Positives = 49/67 (73%), Gaps = 1/67 (1%) Frame = +2 Query: 2 YNLGVANILDLRSLAMGK-GFGHLRNSGLKDLAREIVGLVIEKPKRITMSRWDYEWLSYE 178 Y++ + N +DLR LA K G +NSG+K L +EI+G IEKPKR+TMSRWD EWL+ + Sbjct: 134 YDVSMGNAVDLRVLAAEKLGAEQWKNSGIKSLVKEILGKQIEKPKRVTMSRWDNEWLTGD 193 Query: 179 QISYACV 199 Q+ YAC+ Sbjct: 194 QVQYACL 200 >ref|XP_004136636.1| PREDICTED: Werner Syndrome-like exonuclease-like [Cucumis sativus] gi|449506001|ref|XP_004162625.1| PREDICTED: Werner Syndrome-like exonuclease-like [Cucumis sativus] Length = 209 Score = 74.3 bits (181), Expect = 9e-12 Identities = 35/67 (52%), Positives = 45/67 (67%), Gaps = 1/67 (1%) Frame = +2 Query: 2 YNLGVANILDLRSLAMG-KGFGHLRNSGLKDLAREIVGLVIEKPKRITMSRWDYEWLSYE 178 Y L V +DLR LA G G L+N+GLK L +E++G I KPK +TMSRWD EWL+ Sbjct: 126 YGLKVGKRMDLRDLAESVTGRGELKNAGLKRLGKEVLGKEIHKPKSVTMSRWDQEWLTLN 185 Query: 179 QISYACV 199 Q+ YAC+ Sbjct: 186 QVKYACI 192 >gb|ADN33882.1| 3'-5' exonuclease [Cucumis melo subsp. melo] Length = 209 Score = 74.3 bits (181), Expect = 9e-12 Identities = 35/67 (52%), Positives = 45/67 (67%), Gaps = 1/67 (1%) Frame = +2 Query: 2 YNLGVANILDLRSLAMG-KGFGHLRNSGLKDLAREIVGLVIEKPKRITMSRWDYEWLSYE 178 Y L V +DLR LA G G L+N+GLK L +E++G I KPK +TMSRWD EWL+ Sbjct: 126 YGLKVGKRMDLRDLAESVTGRGELKNAGLKRLGKEVLGKEIHKPKSVTMSRWDQEWLTLN 185 Query: 179 QISYACV 199 Q+ YAC+ Sbjct: 186 QVKYACI 192