BLASTX nr result

ID: Coptis25_contig00008279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008279
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK44478.1| unknown [Lotus japonicus]                               57   2e-06
ref|XP_002509857.1| metal ion binding protein, putative [Ricinus...    56   3e-06
ref|XP_003532422.1| PREDICTED: uncharacterized protein LOC100818...    55   6e-06
ref|XP_002303608.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06
ref|XP_002278542.1| PREDICTED: uncharacterized protein LOC100258...    55   8e-06

>gb|AFK44478.1| unknown [Lotus japonicus]
          Length = 140

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/33 (78%), Positives = 31/33 (93%)
 Frame = +1

Query: 328 MKKVILLLDLHDDKAKQKAMKTVSGISGVDSIS 426
           MKKV++ LDLHDDKAKQKAMKTVS +SG+DSI+
Sbjct: 1   MKKVVVKLDLHDDKAKQKAMKTVSSLSGIDSIA 33


>ref|XP_002509857.1| metal ion binding protein, putative [Ricinus communis]
           gi|223549756|gb|EEF51244.1| metal ion binding protein,
           putative [Ricinus communis]
          Length = 129

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/33 (78%), Positives = 30/33 (90%)
 Frame = +1

Query: 328 MKKVILLLDLHDDKAKQKAMKTVSGISGVDSIS 426
           MKKV+L LDLHDDKAKQKAMK VS +SG+DSI+
Sbjct: 1   MKKVVLKLDLHDDKAKQKAMKAVSSLSGIDSIA 33


>ref|XP_003532422.1| PREDICTED: uncharacterized protein LOC100818139 [Glycine max]
          Length = 161

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/46 (60%), Positives = 36/46 (78%)
 Frame = +1

Query: 289 YKFGKECCEVLLEMKKVILLLDLHDDKAKQKAMKTVSGISGVDSIS 426
           Y+F K  C   + ++KV++ LDLHDDKAKQKAMK+VS ISG+ SIS
Sbjct: 35  YRFSK--CGPFVLLQKVVVKLDLHDDKAKQKAMKSVSSISGIYSIS 78


>ref|XP_002303608.1| predicted protein [Populus trichocarpa] gi|222841040|gb|EEE78587.1|
           predicted protein [Populus trichocarpa]
          Length = 149

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/33 (78%), Positives = 29/33 (87%)
 Frame = +1

Query: 328 MKKVILLLDLHDDKAKQKAMKTVSGISGVDSIS 426
           MKKV+L LDLHDDK KQKAMK VS +SG+DSIS
Sbjct: 1   MKKVVLKLDLHDDKGKQKAMKAVSRLSGIDSIS 33


>ref|XP_002278542.1| PREDICTED: uncharacterized protein LOC100258716 [Vitis vinifera]
           gi|297742238|emb|CBI34387.3| unnamed protein product
           [Vitis vinifera]
          Length = 134

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/33 (78%), Positives = 30/33 (90%)
 Frame = +1

Query: 328 MKKVILLLDLHDDKAKQKAMKTVSGISGVDSIS 426
           MKKV+L LDLHDDKAKQKAMK VS +SGV+SI+
Sbjct: 1   MKKVVLKLDLHDDKAKQKAMKAVSSLSGVNSIA 33


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