BLASTX nr result

ID: Coptis25_contig00008261 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008261
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCJ47150.1| putative GABA permease, partial [Hordeum vulgare...   209   2e-52
dbj|BAJ92672.1| predicted protein [Hordeum vulgare subsp. vulgar...   209   2e-52
ref|XP_002455926.1| hypothetical protein SORBIDRAFT_03g027370 [S...   208   3e-52
ref|XP_002279978.1| PREDICTED: uncharacterized amino-acid permea...   208   3e-52
emb|CBI26962.3| unnamed protein product [Vitis vinifera]              208   3e-52

>emb|CCJ47150.1| putative GABA permease, partial [Hordeum vulgare subsp. vulgare]
          Length = 428

 Score =  209 bits (531), Expect = 2e-52
 Identities = 97/121 (80%), Positives = 110/121 (90%)
 Frame = +3

Query: 3   ISFCMALPSLGSLVAFQAMVSIATIAVNIAYVLPIFFRVTLARKSFIPGPFNLGRYSILV 182
           +S CMALPSLGSLVAFQAMVSIATI + IAY LPIFFRVTLARK F+PGPFNLGRYS+LV
Sbjct: 306 VSLCMALPSLGSLVAFQAMVSIATIGLYIAYALPIFFRVTLARKHFVPGPFNLGRYSVLV 365

Query: 183 GWVAVLWVATITVLFSLPVAYPVTKDNLNYTPVVVCGLFIIIVSWWILSARHWFKGPITN 362
           GWVAVLWV TITVLFSLPV YPVT+D LNYTPV V GLFI++++ W++SARHWFKGP+TN
Sbjct: 366 GWVAVLWVVTITVLFSLPVMYPVTRDTLNYTPVAVGGLFILVLTSWVVSARHWFKGPVTN 425

Query: 363 I 365
           +
Sbjct: 426 L 426


>dbj|BAJ92672.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326529285|dbj|BAK01036.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 522

 Score =  209 bits (531), Expect = 2e-52
 Identities = 97/121 (80%), Positives = 109/121 (90%)
 Frame = +3

Query: 3   ISFCMALPSLGSLVAFQAMVSIATIAVNIAYVLPIFFRVTLARKSFIPGPFNLGRYSILV 182
           +S CMALPSLGSLVAFQAMVSIATI + IAY LPIFFRVTLARK F+PGPFNLGRY +LV
Sbjct: 400 VSLCMALPSLGSLVAFQAMVSIATIGLYIAYALPIFFRVTLARKHFVPGPFNLGRYGVLV 459

Query: 183 GWVAVLWVATITVLFSLPVAYPVTKDNLNYTPVVVCGLFIIIVSWWILSARHWFKGPITN 362
           GWVAVLWV TITVLFSLPV YPVTKD LNYTPV V GLFI++++ W++SARHWFKGP+TN
Sbjct: 460 GWVAVLWVVTITVLFSLPVTYPVTKDTLNYTPVAVGGLFILVLTSWVVSARHWFKGPVTN 519

Query: 363 I 365
           +
Sbjct: 520 L 520


>ref|XP_002455926.1| hypothetical protein SORBIDRAFT_03g027370 [Sorghum bicolor]
           gi|241927901|gb|EES01046.1| hypothetical protein
           SORBIDRAFT_03g027370 [Sorghum bicolor]
          Length = 534

 Score =  208 bits (530), Expect = 3e-52
 Identities = 97/122 (79%), Positives = 109/122 (89%)
 Frame = +3

Query: 3   ISFCMALPSLGSLVAFQAMVSIATIAVNIAYVLPIFFRVTLARKSFIPGPFNLGRYSILV 182
           I+ CMALPSLGSLVAFQAMVSIATI + I+Y LPI FRVTLARK F+PGPFNLGRY +LV
Sbjct: 412 IALCMALPSLGSLVAFQAMVSIATIGLYISYALPILFRVTLARKYFVPGPFNLGRYGVLV 471

Query: 183 GWVAVLWVATITVLFSLPVAYPVTKDNLNYTPVVVCGLFIIIVSWWILSARHWFKGPITN 362
           GWVAVLWVATITVLFSLPV YPVTKD LNYTPV V GLF++++  W+LSARHWFKGP+TN
Sbjct: 472 GWVAVLWVATITVLFSLPVTYPVTKDTLNYTPVAVGGLFVLVLGSWVLSARHWFKGPVTN 531

Query: 363 ID 368
           +D
Sbjct: 532 LD 533


>ref|XP_002279978.1| PREDICTED: uncharacterized amino-acid permease C15C4.04c-like
           [Vitis vinifera]
          Length = 526

 Score =  208 bits (530), Expect = 3e-52
 Identities = 102/123 (82%), Positives = 109/123 (88%)
 Frame = +3

Query: 3   ISFCMALPSLGSLVAFQAMVSIATIAVNIAYVLPIFFRVTLARKSFIPGPFNLGRYSILV 182
           ISFCMAL SLGSLVAFQAMVSIATI + IAY LPIFFRVTLARKSFIPGPFNLGRY ILV
Sbjct: 404 ISFCMALTSLGSLVAFQAMVSIATIGLYIAYALPIFFRVTLARKSFIPGPFNLGRYGILV 463

Query: 183 GWVAVLWVATITVLFSLPVAYPVTKDNLNYTPVVVCGLFIIIVSWWILSARHWFKGPITN 362
           GWVAVLWV TI+VLFSLPVAYP+T + LNYTPV V GL  + V+ WI+SARHWFKGPITN
Sbjct: 464 GWVAVLWVITISVLFSLPVAYPITTETLNYTPVAVGGLLFLAVASWIISARHWFKGPITN 523

Query: 363 IDT 371
           IDT
Sbjct: 524 IDT 526


>emb|CBI26962.3| unnamed protein product [Vitis vinifera]
          Length = 522

 Score =  208 bits (530), Expect = 3e-52
 Identities = 102/123 (82%), Positives = 109/123 (88%)
 Frame = +3

Query: 3   ISFCMALPSLGSLVAFQAMVSIATIAVNIAYVLPIFFRVTLARKSFIPGPFNLGRYSILV 182
           ISFCMAL SLGSLVAFQAMVSIATI + IAY LPIFFRVTLARKSFIPGPFNLGRY ILV
Sbjct: 400 ISFCMALTSLGSLVAFQAMVSIATIGLYIAYALPIFFRVTLARKSFIPGPFNLGRYGILV 459

Query: 183 GWVAVLWVATITVLFSLPVAYPVTKDNLNYTPVVVCGLFIIIVSWWILSARHWFKGPITN 362
           GWVAVLWV TI+VLFSLPVAYP+T + LNYTPV V GL  + V+ WI+SARHWFKGPITN
Sbjct: 460 GWVAVLWVITISVLFSLPVAYPITTETLNYTPVAVGGLLFLAVASWIISARHWFKGPITN 519

Query: 363 IDT 371
           IDT
Sbjct: 520 IDT 522


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