BLASTX nr result

ID: Coptis25_contig00008254 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008254
         (992 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276343.1| PREDICTED: ubiquitin-conjugating enzyme E2 5...   314   2e-83
ref|NP_001237603.1| ubiquitin carrier protein 4 [Glycine max] gi...   311   1e-82
ref|XP_003548669.1| PREDICTED: ubiquitin-conjugating enzyme E2 5...   311   1e-82
ref|XP_002511883.1| ubiquitin-conjugating enzyme h, putative [Ri...   310   4e-82
ref|XP_002279927.1| PREDICTED: ubiquitin-conjugating enzyme E2 5...   309   6e-82

>ref|XP_002276343.1| PREDICTED: ubiquitin-conjugating enzyme E2 5 [Vitis vinifera]
           gi|147789691|emb|CAN74060.1| hypothetical protein
           VITISV_024680 [Vitis vinifera]
           gi|297745317|emb|CBI40397.3| unnamed protein product
           [Vitis vinifera]
          Length = 184

 Score =  314 bits (804), Expect = 2e-83
 Identities = 150/184 (81%), Positives = 158/184 (85%)
 Frame = +1

Query: 220 MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFFVDFHGPTESPYHGGVWRIRVELPDAYP 399
           MSSPSKRREMDLMKLMMSDYKVEMINDGMQEF+V FHGP++SPYHGGVWRIRVELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVHFHGPSDSPYHGGVWRIRVELPDAYP 60

Query: 400 YKSPSVGFVNKIYHPNVDEVSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 579
           YKSPS+GFVNKIYHPNVDE+SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120

Query: 580 NGEAAALMMRDKSTYEQRVKEYCEKYAKPEDIGAVXXXXXXXXXXXXXXXXXXXXXXVAG 759
           NGEAAALMMRD++ YEQRVKEYCEKYAKPED+GA                       VAG
Sbjct: 121 NGEAAALMMRDRTAYEQRVKEYCEKYAKPEDVGAAPEEKSSDEEELSEDDYDSSDEAVAG 180

Query: 760 HADP 771
            ADP
Sbjct: 181 QADP 184


>ref|NP_001237603.1| ubiquitin carrier protein 4 [Glycine max]
           gi|6066285|gb|AAF03236.1|AF180143_1 ubiquitin carrier
           protein 4 [Glycine max]
          Length = 183

 Score =  311 bits (798), Expect = 1e-82
 Identities = 144/154 (93%), Positives = 152/154 (98%)
 Frame = +1

Query: 220 MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFFVDFHGPTESPYHGGVWRIRVELPDAYP 399
           MSSPSKRREMDLMKLMMSDYKVEMINDGMQEF+V FHGP ESPYHGGVW++RVELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVHFHGPNESPYHGGVWKVRVELPDAYP 60

Query: 400 YKSPSVGFVNKIYHPNVDEVSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 579
           YKSPS+GF+NKIYHPNVDE+SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120

Query: 580 NGEAAALMMRDKSTYEQRVKEYCEKYAKPEDIGA 681
           NGEAAALMMRD++TYEQRVKEYCEKYAKPEDIGA
Sbjct: 121 NGEAAALMMRDRATYEQRVKEYCEKYAKPEDIGA 154


>ref|XP_003548669.1| PREDICTED: ubiquitin-conjugating enzyme E2 5-like [Glycine max]
          Length = 183

 Score =  311 bits (798), Expect = 1e-82
 Identities = 144/154 (93%), Positives = 152/154 (98%)
 Frame = +1

Query: 220 MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFFVDFHGPTESPYHGGVWRIRVELPDAYP 399
           MSSPSKRREMDLMKLMMSDYKVEMINDGMQEF+V FHGP ESPYHGGVW++RVELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVHFHGPNESPYHGGVWKVRVELPDAYP 60

Query: 400 YKSPSVGFVNKIYHPNVDEVSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 579
           YKSPS+GF+NKIYHPNVDE+SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120

Query: 580 NGEAAALMMRDKSTYEQRVKEYCEKYAKPEDIGA 681
           NGEAAALMMRD++TYEQRVKEYCEKYAKPEDIGA
Sbjct: 121 NGEAAALMMRDRATYEQRVKEYCEKYAKPEDIGA 154


>ref|XP_002511883.1| ubiquitin-conjugating enzyme h, putative [Ricinus communis]
           gi|223549063|gb|EEF50552.1| ubiquitin-conjugating enzyme
           h, putative [Ricinus communis]
          Length = 183

 Score =  310 bits (793), Expect = 4e-82
 Identities = 145/154 (94%), Positives = 150/154 (97%)
 Frame = +1

Query: 220 MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFFVDFHGPTESPYHGGVWRIRVELPDAYP 399
           MSSPSKRREMDLMKLMMSDYKVEMINDGMQEF+V FHGP +SPYHGGVWRIRVELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVHFHGPNDSPYHGGVWRIRVELPDAYP 60

Query: 400 YKSPSVGFVNKIYHPNVDEVSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 579
           YKSPS+GFVNKIYHPNVDE+SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120

Query: 580 NGEAAALMMRDKSTYEQRVKEYCEKYAKPEDIGA 681
           NGEAAALMMRD+  YEQRVKEYCEKYAKPEDIGA
Sbjct: 121 NGEAAALMMRDRPAYEQRVKEYCEKYAKPEDIGA 154


>ref|XP_002279927.1| PREDICTED: ubiquitin-conjugating enzyme E2 5 [Vitis vinifera]
           gi|147765325|emb|CAN60588.1| hypothetical protein
           VITISV_023123 [Vitis vinifera]
           gi|297742213|emb|CBI34362.3| unnamed protein product
           [Vitis vinifera]
          Length = 183

 Score =  309 bits (792), Expect = 6e-82
 Identities = 144/154 (93%), Positives = 151/154 (98%)
 Frame = +1

Query: 220 MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFFVDFHGPTESPYHGGVWRIRVELPDAYP 399
           MSSPSKRREMDLMKLMMSDYKVEM+NDGMQEF+VDFHGP +SPYHGGVWRIRVELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVEMVNDGMQEFYVDFHGPGDSPYHGGVWRIRVELPDAYP 60

Query: 400 YKSPSVGFVNKIYHPNVDEVSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 579
           YKSPS+GFVNKIYHPNVDE+SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120

Query: 580 NGEAAALMMRDKSTYEQRVKEYCEKYAKPEDIGA 681
           NGEAAALMMRD+  YEQRVKEYCEKYAKPE+IGA
Sbjct: 121 NGEAAALMMRDRPAYEQRVKEYCEKYAKPENIGA 154


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