BLASTX nr result
ID: Coptis25_contig00008251
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00008251
(2311 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002521010.1| DNA binding protein, putative [Ricinus commu... 465 e-128
ref|XP_004151980.1| PREDICTED: transcription factor bHLH3-like [... 455 e-125
gb|ADL36590.1| BHLH domain class transcription factor [Malus x d... 455 e-125
ref|XP_002282584.2| PREDICTED: transcription factor bHLH3-like [... 451 e-124
ref|XP_003536928.1| PREDICTED: transcription factor bHLH3-like [... 447 e-123
>ref|XP_002521010.1| DNA binding protein, putative [Ricinus communis]
gi|223539847|gb|EEF41427.1| DNA binding protein, putative
[Ricinus communis]
Length = 503
Score = 465 bits (1196), Expect = e-128
Identities = 266/520 (51%), Positives = 334/520 (64%), Gaps = 25/520 (4%)
Frame = +2
Query: 173 MGDAYWGSEEDKAVAESVLGSQALEFLIXXXXXXXXXXXXXXXXP-AVQQELARLVDALD 349
MG+ +W ++EDKA+ ES++G++A EFLI +Q+ L +LVD +
Sbjct: 1 MGEKFW-AKEDKAMVESIIGAEACEFLISSASNNVLADLVSPPSSLGLQEGLNQLVDGSN 59
Query: 350 WTYAILWQVSRSKSGELNLVWGQGHCKTQGEEAPSHN---------------NNKRVLQQ 484
W YAI W S KSG L WG+G C+ Q A N + KRVLQ+
Sbjct: 60 WNYAIFWCASSLKSGGSILTWGEGICRNQKCGAGEGNATGDRRLEGVENGNESKKRVLQK 119
Query: 485 LHGLFGGATPPRF----DSVSDVQIFYLTSVYYSFPFDDAPSGPAWSFASNRPIWASDQK 652
LH F + + + VSDV++FYLTS+Y++F D A GPA S+ S R IWASD
Sbjct: 120 LHSCFNASDGDNYAANLNGVSDVEMFYLTSMYFTFRCDSA-YGPAESYKSGRSIWASDVI 178
Query: 653 NCLDHYSSRSFLARSAGFKTLVCVPIQSGVVELGSLKQCPEDHNVLQMIQNVFSGSRSTT 832
CL+HY RSFLARSAGF+TL P++SGVVELGS+K PE+H + + + +F G+ +
Sbjct: 179 TCLEHYHLRSFLARSAGFQTLAFFPVKSGVVELGSIKSIPEEHIIGERAKTIFGGANALQ 238
Query: 833 SLV-PKIFGHDLSLGNAKPRSLTMNFSPKVEEDVDFSS----ASYTNQASISGHSNGLAD 997
+ PKIFG +LSLG++K RS+++NFSPKVE+D+ F+S A TN + S S +D
Sbjct: 239 AKTCPKIFGRELSLGSSKSRSISINFSPKVEDDLIFTSEYPEAIGTNPVNGSTSSGCPSD 298
Query: 998 QEYGTYXXXXXXXXXXXXKFFLQSNHNLPGGLNPQVKILSSDQSLKDESSRPDERKPRKR 1177
K F N G N + + +Q +D S +ERKPRKR
Sbjct: 299 --------------INEAKLFPHLNQMNVPGFNTETMVTGLEQPKEDLSPHQNERKPRKR 344
Query: 1178 GRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQM 1357
GRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQ
Sbjct: 345 GRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQT 404
Query: 1358 KIRVLETEKEMTRNNNQKQPLVPDIDVQTRQEDTVVRVSCPLDAHPVSRVIRAFQETQVT 1537
KIRVLETEKEM+ NNNQ Q V +ID Q RQED VVRVSCPLD HPVS ++ +F+E QVT
Sbjct: 405 KIRVLETEKEMS-NNNQNQFPVTEIDFQARQEDAVVRVSCPLDVHPVSSILESFREHQVT 463
Query: 1538 VHESKVSTTDNDSVLHTFSIRTQGGASEHLKERLIAALSR 1657
E +S +ND ++HTFSIRTQGGA+E LKE+L A S+
Sbjct: 464 AQECNMSAAENDKIIHTFSIRTQGGAAEQLKEKLEAVFSK 503
>ref|XP_004151980.1| PREDICTED: transcription factor bHLH3-like [Cucumis sativus]
gi|449505155|ref|XP_004162392.1| PREDICTED: transcription
factor bHLH3-like [Cucumis sativus]
Length = 501
Score = 455 bits (1170), Expect = e-125
Identities = 255/519 (49%), Positives = 322/519 (62%), Gaps = 24/519 (4%)
Frame = +2
Query: 173 MGDAYWGSEEDKAVAESVLGSQALEFLIXXXXXXXXXXXXXXXX---PAVQQELARLVDA 343
MG+ +W SEE + V ES++GS+A EFLI +V Q L++++D
Sbjct: 1 MGEKFWASEETRVVVESIVGSEACEFLISLASINILPQDSLQFSLGDSSVNQGLSQVLDG 60
Query: 344 LDWTYAILWQVSRSKSGELNLVWGQGHCKTQGEE----------APSHNNNKRVLQQLHG 493
W YAI W+V KSG L L+WG G+C E +VLQ L
Sbjct: 61 SSWNYAIFWRVVTLKSGALALIWGDGNCNDSKIEIGISSVDVQGGKKEELKTQVLQMLQS 120
Query: 494 LFGGATPP----RFDSVSDVQIFYLTSVYYSFPFDDAPSGPAWSFASNRPIWASDQKNCL 661
FG + R D SD+++ YLTS YY F D S S+ S + IWASD +CL
Sbjct: 121 SFGRSDEDGYGARRDEASDIEMLYLTSKYYKFMCDSG-SSLGESYKSGKSIWASDVTSCL 179
Query: 662 DHYSSRSFLARSAGFKTLVCVPIQSGVVELGSLKQCPEDHNVLQMIQNVFSGS-RSTTSL 838
+Y SR FLA+ AGF+TLV VP++ GVVELGS K PED VL++++ F GS +
Sbjct: 180 RNYQSRGFLAKVAGFQTLVFVPVKLGVVELGSTKSIPEDQGVLELVRASFGGSITAQLKA 239
Query: 839 VPKIFGHDLSLGNAKPRSLTMNFSPKVEEDVDFSSASYTNQASISGH-----SNGLADQE 1003
P+IFGH+LSLG KPRSL++NFSPK+E+D +FSS Y Q H SNG +
Sbjct: 240 FPRIFGHELSLGGTKPRSLSINFSPKLEDDTNFSSEGYELQGLGGNHIFGNSSNGCRGDD 299
Query: 1004 YGTYXXXXXXXXXXXXKFFLQSNHNLPGGLNPQVKILSSDQSLKDESSRPDERKPRKRGR 1183
K F N + GG N Q ++ + + + S + D+RKPRKRGR
Sbjct: 300 NDA-------------KMFPHGNQEVVGGFNAQTRLSTMEFPRDESSPQGDDRKPRKRGR 346
Query: 1184 KPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKI 1363
KPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKI
Sbjct: 347 KPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKI 406
Query: 1364 RVLETEKEMTRNNNQKQPLVPDIDVQTRQEDTVVRVSCPLDAHPVSRVIRAFQETQVTVH 1543
+V+ETEK++ + +ID R+ED VVRVSCPLD HPVS+VI+ F+E Q+
Sbjct: 407 KVMETEKQIASGREKN----TEIDFHAREEDAVVRVSCPLDLHPVSKVIKTFREHQIEAQ 462
Query: 1544 ESKVST-TDNDSVLHTFSIRTQGGASEHLKERLIAALSR 1657
ES V+T TDND V+H+F IRT+GGA+E LKE+L+AALS+
Sbjct: 463 ESNVTTSTDNDKVIHSFFIRTEGGAAEQLKEKLVAALSK 501
>gb|ADL36590.1| BHLH domain class transcription factor [Malus x domestica]
Length = 502
Score = 455 bits (1170), Expect = e-125
Identities = 262/519 (50%), Positives = 330/519 (63%), Gaps = 24/519 (4%)
Frame = +2
Query: 173 MGDAYWGSEEDKAVAESVLGSQALEFLIXXXXXXXXXXXXXXXXP-AVQQELARLVDALD 349
MG+ +W +EEDK + ESVLG++A FLI VQQ L +LV+ +
Sbjct: 1 MGEKFWVNEEDKVMVESVLGTEACRFLISLASENVLSDLIRPPGKLGVQQGLCQLVNGSN 60
Query: 350 WTYAILWQVSRSKSGELNLVWGQGHCKTQGEEAPSHNNNKR----------------VLQ 481
W YAI WQ SKSG L WG GHC+ + N+ R V++
Sbjct: 61 WNYAIFWQAVGSKSGGSALSWGDGHCRDPKDGGAGDANSSRDSSLEAVQNKEEVKKLVVE 120
Query: 482 QLHGLFGGATPP----RFDSVSDVQIFYLTSVYYSFPFDD-APSGPAWSFASNRPIWASD 646
+LH FGG R D VSDV++FYLTS+ Y+F D + GPA S+ S + IW SD
Sbjct: 121 KLHACFGGLNADNYARRLDGVSDVEMFYLTSMCYAFQLDSISHCGPAESYNSRKSIWVSD 180
Query: 647 QKNCLDHYSSRSFLARSAGFKTLVCVPIQSGVVELGSLKQCPEDHNVLQMIQNVF-SGSR 823
+CL HY SRSFLAR AGF+T+V VP++SGVVELGS+K E+ + + M+++ F S
Sbjct: 181 AGSCLHHYQSRSFLARLAGFQTVVFVPMKSGVVELGSVKSTLEEQSYVDMVRSAFWESSP 240
Query: 824 STTSLVPKIFGHDLSLGNAKPRSLTMNFSPKVEEDVDFSSASYTNQASISGHSNGLADQE 1003
P IFG +LSLG K +S+ ++F+PK+EED F S S+ Q+ G SNG +
Sbjct: 241 IQPKAFPMIFGRELSLGGPKSQSVNVSFTPKIEEDFVFPSESFELQSV--GTSNGFRSE- 297
Query: 1004 YGTYXXXXXXXXXXXXKFFLQSNHNLPGGLNPQVKILSSDQSLKDESS-RPDERKPRKRG 1180
K F Q N + G N Q ++ SS + LKDESS + DE+KPRKRG
Sbjct: 298 ------------GGEVKLFPQMNQMMVDGFNTQTRV-SSSELLKDESSTQVDEQKPRKRG 344
Query: 1181 RKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMK 1360
RKP+NGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIT+ITDLQ K
Sbjct: 345 RKPSNGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITHITDLQTK 404
Query: 1361 IRVLETEKEMTRNNNQKQPLVPDIDVQTRQEDTVVRVSCPLDAHPVSRVIRAFQETQVTV 1540
IRV+ETEK+M NN KQ VP+ID Q R D VVR++ PLD+HPVS VIR +E ++
Sbjct: 405 IRVIETEKQMV-NNKGKQLPVPEIDFQERHGDAVVRMNFPLDSHPVSDVIRTLREHKIVP 463
Query: 1541 HESKVSTTDNDSVLHTFSIRTQGGASEHLKERLIAALSR 1657
ES VS TDND V+HTFSI+TQGG +E L+E+L+A LS+
Sbjct: 464 QESNVSITDNDKVIHTFSIQTQGGDAEKLREKLVAFLSK 502
>ref|XP_002282584.2| PREDICTED: transcription factor bHLH3-like [Vitis vinifera]
Length = 491
Score = 451 bits (1161), Expect = e-124
Identities = 265/513 (51%), Positives = 330/513 (64%), Gaps = 18/513 (3%)
Frame = +2
Query: 173 MGDAYWGSEEDKAVAESVLGSQALEFLIXXXXXXXXXXXXXXXXP--AVQQELARLVDAL 346
MG+ +W +EE+KA+ ESVLG++ EFLI VQ+ L +LV+
Sbjct: 1 MGEKFWLNEEEKAMVESVLGAEGWEFLISCASDKTHLSESGVASSDGGVQKGLRQLVEGS 60
Query: 347 DWTYAILWQVSRSKSGELNLVWGQGHCK-TQGEEAPSH----NNNKRVLQQLHGLFGGAT 511
+W+YAI W+VSR K L+WG G+C+ +GE K VL++LH FG
Sbjct: 61 NWSYAIFWRVSRVKDV---LIWGDGYCREAKGEVGDGGLEEVGKKKEVLKKLHEYFGVGE 117
Query: 512 PPRF----DSVSDVQIFYLTSVYYSFPFDDAPSGPAWSFASNRPIWASDQKNCLDHYSSR 679
++ D +S++++FYLTS++YSF D GPA S R +W D C D Y +R
Sbjct: 118 EDKYWAKLDLLSNIEMFYLTSMFYSFS-GDLQYGPALVLKSGRWVWVVDAVGCSDQYRAR 176
Query: 680 SFLARSAGFKTLVCVPIQSGVVELGSLKQCPEDHNVLQMIQNVFSGSR-STTSLVPKIFG 856
S LAR AGF+T+V VP++ GV+E+ SL ED NV++MI+ VF G + PKIFG
Sbjct: 177 SVLARLAGFQTVVFVPVKDGVIEVASLMLVKEDENVVKMIKGVFGGMNFGQAKVYPKIFG 236
Query: 857 HDLSLGN-AKPRSLTMNFSPKVEEDVDFSSASYTNQASISGH-----SNGLADQEYGTYX 1018
H+LSLG+ AK RS+++NF+PK+E D F + SY Q S SNG +++
Sbjct: 237 HELSLGSGAKSRSMSINFAPKLEGDSGFGAESYDVQGLGSNQVYGNSSNGCMNED----- 291
Query: 1019 XXXXXXXXXXXKFFLQSNHNLPGGLNPQVKILSSDQSLKDESSRPDERKPRKRGRKPANG 1198
K F Q N N QV + +Q D R DERKPRKRGRKPANG
Sbjct: 292 --------NEGKIFPQLNQIF----NAQVLVSGFEQPKDDLLPRVDERKPRKRGRKPANG 339
Query: 1199 REEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIRVLET 1378
REEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAI+YITDLQMKIR+LE
Sbjct: 340 REEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAISYITDLQMKIRILEA 399
Query: 1379 EKEMTRNNNQKQPLVPDIDVQTRQEDTVVRVSCPLDAHPVSRVIRAFQETQVTVHESKVS 1558
EKE+ NN Q Q VP ID Q RQEDTVVRVSCPLDAHPVSRVI+ +E QV E++VS
Sbjct: 400 EKEIV-NNKQNQSPVPQIDFQDRQEDTVVRVSCPLDAHPVSRVIKTLKEHQVVAPEAEVS 458
Query: 1559 TTDNDSVLHTFSIRTQGGASEHLKERLIAALSR 1657
T +ND VLHTFSIRTQ GA+E LKE+L+AALS+
Sbjct: 459 TMENDKVLHTFSIRTQTGAAECLKEKLVAALSK 491
>ref|XP_003536928.1| PREDICTED: transcription factor bHLH3-like [Glycine max]
Length = 504
Score = 447 bits (1151), Expect = e-123
Identities = 261/519 (50%), Positives = 328/519 (63%), Gaps = 24/519 (4%)
Frame = +2
Query: 173 MGDAYWGSEEDKAVAESVLGSQALEFLIXXXXXXXXXXXXXXXX---PAVQQELARLVDA 343
+G+ + SE+DK V ESVLG++A+ F I PA++Q L +LV+
Sbjct: 2 VGEKFCVSEDDKGVLESVLGAEAVAFFISALSNNVFSRVVAPSAGADPALRQRLCQLVEG 61
Query: 344 LDWTYAILWQVSRSKSGELNLVWGQGHCKT-QGE-----EAPSHNNNKRVLQQLHGLFGG 505
W YA+ WQV+ KSG LVWG GHC +GE + K+VLQ+L FGG
Sbjct: 62 SKWNYAVFWQVAGLKSGGSALVWGDGHCSDPKGERNGVGKEDEQEVRKKVLQKLDACFGG 121
Query: 506 -----ATPPRFDSVSDVQIFYLTSVYYSFPFDDAPSGPAWSFASNRPIWASDQKNCLDHY 670
A R D VS++ +FYL+S+ Y F FD GP SF S + IWASD CL+
Sbjct: 122 SLLKDANHVRLDRVSELLMFYLSSMCYIFGFDSL-CGPGSSFKSGKFIWASDAAGCLNQL 180
Query: 671 SSRSFLARSAGFKTLVCVPIQSGVVELGSLKQCPEDHNVLQMIQNVFS-GSRSTTSLVPK 847
SRSFL + AG T+V VP++SGVVELGS + PE+ V++M++ F S + PK
Sbjct: 181 ESRSFLGKLAGLHTVVFVPLKSGVVELGSFEMVPEEQGVVEMVRTAFGESSPGQAKVFPK 240
Query: 848 IFGHDLSLGNAKPRSLTMNFSPKVEEDVDFSSASYTNQASISGHSNG------LADQEYG 1009
IFGH+LSLG+ K +S+T++FSPKVE+D F+S SY QA H+ G L D G
Sbjct: 241 IFGHELSLGDTKSQSITISFSPKVEDDPGFTSDSYEVQALGVNHAYGNSSNGTLGDGNEG 300
Query: 1010 TYXXXXXXXXXXXXKFFLQSNHNLPGGLNPQVKILSSDQSLKDESS-RPDERKPRKRGRK 1186
T F Q N + G N Q ++ D +D SS DERKP+KRGRK
Sbjct: 301 T--------------LFPQLNQMMAGNFNAQARVPCLDLGNEDSSSIHADERKPKKRGRK 346
Query: 1187 PANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIR 1366
PANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIT+ITDLQMKI+
Sbjct: 347 PANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITFITDLQMKIK 406
Query: 1367 VLETEKEMTRNNNQKQPLVPDIDVQTRQEDTVVRVSCPLDAHPVSRVIRAFQETQVTVHE 1546
VLE EK M N +QK L PD+D Q R++DTVV V CPLD HPVS V++ F+E Q+ +
Sbjct: 407 VLEAEKNMGNNKDQKLSL-PDMDFQEREDDTVVTVRCPLDIHPVSNVVKTFREHQIVAQD 465
Query: 1547 SKVSTTDNDSVLHTFSIRTQGG--ASEHLKERLIAALSR 1657
S VST D D ++HTFSIRT+GG A+ LKE+L A+LS+
Sbjct: 466 SNVSTAD-DKIIHTFSIRTEGGEAAAIQLKEKLEASLSK 503