BLASTX nr result

ID: Coptis25_contig00008242 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008242
         (1189 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307927.1| predicted protein [Populus trichocarpa] gi|2...   258   3e-66
ref|XP_002265259.1| PREDICTED: protein PLANT CADMIUM RESISTANCE ...   256   6e-66
emb|CAN70759.1| hypothetical protein VITISV_012852 [Vitis vinifera]   256   6e-66
ref|XP_003517539.1| PREDICTED: protein PLANT CADMIUM RESISTANCE ...   251   3e-64
gb|AFK42439.1| unknown [Lotus japonicus]                              244   2e-62

>ref|XP_002307927.1| predicted protein [Populus trichocarpa] gi|222853903|gb|EEE91450.1|
           predicted protein [Populus trichocarpa]
          Length = 190

 Score =  258 bits (658), Expect = 3e-66
 Identities = 120/185 (64%), Positives = 136/185 (73%), Gaps = 3/185 (1%)
 Frame = -3

Query: 791 KNNSSYVPPPYYIPLEQSEIIRNA---NDTXXXXXXXPLSHDDEWTSGICACCDDMHSCC 621
           K  SSYVPP Y IPL+QS++   +   N+              +W+SGICACCDDM SCC
Sbjct: 2   KGESSYVPPRY-IPLDQSDLETESVPRNEERSGAASVVGDGPAQWSSGICACCDDMQSCC 60

Query: 620 LGLTCPCFLFGKNAEFLGSGTLAGSCITHFILWGIVNAICCMLTDGTLCCLPGCFVACYA 441
           +GL CPC+LFGKNAEFLGSGTL GSC THFILW +VN +CC +TDG L  LPGCFVACYA
Sbjct: 61  IGLFCPCYLFGKNAEFLGSGTLIGSCATHFILWALVNTVCCCMTDGILLGLPGCFVACYA 120

Query: 440 CGYRRTLRSKYDLPEVPCGDLTTHLFCHMCAICQEYREIRERSIDSRQLNFKLAEVIAPP 261
           CGYRR LR KY+L E PCGDL TH FCH+CA CQEYREIRERS DS   + KLA V APP
Sbjct: 121 CGYRRVLREKYNLQEAPCGDLVTHFFCHLCANCQEYREIRERSGDSNSPDLKLAVVTAPP 180

Query: 260 VQRMD 246
           VQ M+
Sbjct: 181 VQTME 185


>ref|XP_002265259.1| PREDICTED: protein PLANT CADMIUM RESISTANCE 10-like isoform 1
           [Vitis vinifera] gi|297741748|emb|CBI32880.3| unnamed
           protein product [Vitis vinifera]
          Length = 188

 Score =  256 bits (655), Expect = 6e-66
 Identities = 120/189 (63%), Positives = 138/189 (73%), Gaps = 2/189 (1%)
 Frame = -3

Query: 791 KNNSSYVPPPYYIPLEQS--EIIRNANDTXXXXXXXPLSHDDEWTSGICACCDDMHSCCL 618
           K   SYVPPPY IPL QS  E+    +D+             +W+SGICACCDDM SCC+
Sbjct: 2   KGQGSYVPPPY-IPLGQSDSEVEIVPHDSDLPDHRHTSDSPSQWSSGICACCDDMQSCCI 60

Query: 617 GLTCPCFLFGKNAEFLGSGTLAGSCITHFILWGIVNAICCMLTDGTLCCLPGCFVACYAC 438
           G  CPCFLF KNAEFLGSGTLAGSC+TH I W +VN +CC+L+DGTL  LPGCFVACYAC
Sbjct: 61  GFFCPCFLFAKNAEFLGSGTLAGSCMTHLIFWALVNTVCCLLSDGTLLGLPGCFVACYAC 120

Query: 437 GYRRTLRSKYDLPEVPCGDLTTHLFCHMCAICQEYREIRERSIDSRQLNFKLAEVIAPPV 258
           GYRR LRSKY+L E PCGD TTH FCH+CAICQEYREIRERS      + +L+ V APPV
Sbjct: 121 GYRRALRSKYNLQEAPCGDFTTHFFCHLCAICQEYREIRERS-GPETPDLRLSVVTAPPV 179

Query: 257 QRMDLTSKD 231
           Q M+  SK+
Sbjct: 180 QTMETASKE 188


>emb|CAN70759.1| hypothetical protein VITISV_012852 [Vitis vinifera]
          Length = 188

 Score =  256 bits (655), Expect = 6e-66
 Identities = 121/189 (64%), Positives = 139/189 (73%), Gaps = 2/189 (1%)
 Frame = -3

Query: 791 KNNSSYVPPPYYIPLEQS--EIIRNANDTXXXXXXXPLSHDDEWTSGICACCDDMHSCCL 618
           K   SYVPPPY IPL QS  E+    +D+             +W+SGICACCDDM SCC+
Sbjct: 2   KGQGSYVPPPY-IPLGQSDSEVEIVPHDSDLPXHRHTSDSPSQWSSGICACCDDMQSCCI 60

Query: 617 GLTCPCFLFGKNAEFLGSGTLAGSCITHFILWGIVNAICCMLTDGTLCCLPGCFVACYAC 438
           G  CPCFLF KNAEFLGSGTLAGSC+TH I W +VN +CC+L+DGTL  LPGCFVACYAC
Sbjct: 61  GFFCPCFLFAKNAEFLGSGTLAGSCMTHLIFWALVNTVCCLLSDGTLLGLPGCFVACYAC 120

Query: 437 GYRRTLRSKYDLPEVPCGDLTTHLFCHMCAICQEYREIRERSIDSRQLNFKLAEVIAPPV 258
           GYRR LRSKY+L E PCGD TTH FCH+CAICQEYREIRERS      + +L+ V APPV
Sbjct: 121 GYRRALRSKYNLQEAPCGDFTTHFFCHLCAICQEYREIRERS-GPETPDLRLSVVTAPPV 179

Query: 257 QRMDLTSKD 231
           Q M+  SK+
Sbjct: 180 QTMETASKE 188


>ref|XP_003517539.1| PREDICTED: protein PLANT CADMIUM RESISTANCE 10-like [Glycine max]
          Length = 185

 Score =  251 bits (641), Expect = 3e-64
 Identities = 117/186 (62%), Positives = 129/186 (69%)
 Frame = -3

Query: 791 KNNSSYVPPPYYIPLEQSEIIRNANDTXXXXXXXPLSHDDEWTSGICACCDDMHSCCLGL 612
           KN   YVPP Y IPL QS+    A D              +W+SGICACCDDM SCC+G 
Sbjct: 2   KNQHGYVPPAY-IPLGQSD--SEAVDVSLLSTNGSNQMQAQWSSGICACCDDMQSCCIGC 58

Query: 611 TCPCFLFGKNAEFLGSGTLAGSCITHFILWGIVNAICCMLTDGTLCCLPGCFVACYACGY 432
            CPCFLFGKNAEFLGSGT  GSC+THFILW +VN  CC+LTDG    LPGC V+CYACGY
Sbjct: 59  LCPCFLFGKNAEFLGSGTFLGSCVTHFILWSVVNTACCLLTDGLFWGLPGCLVSCYACGY 118

Query: 431 RRTLRSKYDLPEVPCGDLTTHLFCHMCAICQEYREIRERSIDSRQLNFKLAEVIAPPVQR 252
           R+ LRSKY+LPE PCGD  TH  CH CAICQEYREIRERS D    + KLA V APP+Q 
Sbjct: 119 RKALRSKYNLPEAPCGDFVTHFCCHPCAICQEYREIRERSGDCEATDLKLAVVAAPPIQT 178

Query: 251 MDLTSK 234
           M   SK
Sbjct: 179 MQSDSK 184


>gb|AFK42439.1| unknown [Lotus japonicus]
          Length = 191

 Score =  244 bits (624), Expect = 2e-62
 Identities = 117/191 (61%), Positives = 131/191 (68%), Gaps = 5/191 (2%)
 Frame = -3

Query: 791 KNNSSYVPPPYYIPLEQSEIIRNANDTXXXXXXXPLSH-----DDEWTSGICACCDDMHS 627
           KN   YVPP Y IPL QS+ +               S+       +W+SGICAC +DM S
Sbjct: 2   KNQHGYVPPAY-IPLGQSDSVALDVSPPQGNEQHRTSNVSNQIQPQWSSGICACFNDMQS 60

Query: 626 CCLGLTCPCFLFGKNAEFLGSGTLAGSCITHFILWGIVNAICCMLTDGTLCCLPGCFVAC 447
           CC+G  CPCFLFGKNAEFLGSGT  GSC+THF LWG+VN  CC LTDG L  LPGC V+ 
Sbjct: 61  CCIGCLCPCFLFGKNAEFLGSGTFLGSCVTHFALWGLVNVGCCFLTDGLLLGLPGCLVST 120

Query: 446 YACGYRRTLRSKYDLPEVPCGDLTTHLFCHMCAICQEYREIRERSIDSRQLNFKLAEVIA 267
           YACGYRRTLRSKY+LPE PCGD  TH  CH+CAICQEYREIRERS DS   + KLA V A
Sbjct: 121 YACGYRRTLRSKYNLPEAPCGDFVTHCCCHLCAICQEYREIRERSGDSEATDMKLAVVTA 180

Query: 266 PPVQRMDLTSK 234
           PP+Q M   SK
Sbjct: 181 PPIQAMQTDSK 191


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