BLASTX nr result
ID: Coptis25_contig00008241
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00008241
(1934 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280990.1| PREDICTED: carbon catabolite repressor prote... 683 0.0
emb|CAN73496.1| hypothetical protein VITISV_044263 [Vitis vinifera] 683 0.0
ref|XP_002323345.1| predicted protein [Populus trichocarpa] gi|1... 676 0.0
ref|XP_002531170.1| carbon catabolite repressor protein, putativ... 674 0.0
ref|XP_002308351.1| predicted protein [Populus trichocarpa] gi|2... 671 0.0
>ref|XP_002280990.1| PREDICTED: carbon catabolite repressor protein 4 homolog 1 [Vitis
vinifera] gi|297739794|emb|CBI29976.3| unnamed protein
product [Vitis vinifera]
Length = 603
Score = 683 bits (1763), Expect = 0.0
Identities = 358/528 (67%), Positives = 392/528 (74%), Gaps = 28/528 (5%)
Frame = -2
Query: 1933 DAWQHHRVLHDRPXXXXXXXXXXXXXELFGRL-----------------------GSAPV 1823
DAWQHHRVLHDR LFGR GSAP+
Sbjct: 100 DAWQHHRVLHDRAASAVNENGNEEEE-LFGRFNSTGSGSINTSLAPSASSASLANGSAPL 158
Query: 1822 YPTA--EKTSGEIWFEVGRSKTYTPTVDDIGHVLKFECXXXXXXXXXXXXXXXXXXXXXH 1649
YP A +++ GE WFEVGRSKTYTPT DDIGHVLK
Sbjct: 159 YPAAVTQRSGGETWFEVGRSKTYTPTADDIGHVLK------------------------- 193
Query: 1648 VLKFECVAVDAETKLPVGHAKAILTSRVIPAPTPTPRRLIPVDGIDMTSHLDLDGHTASS 1469
FECV VDAETKL VGH ILTSRVIPAP+PTPR LI V G+DM HLD DG +S+
Sbjct: 194 ---FECVVVDAETKLTVGHGSNILTSRVIPAPSPTPRHLISVSGVDMVGHLDSDGRISSA 250
Query: 1468 GTFTVLSYNILAEVYATTESYSYCPSWALSWSYRKQNLLREIVGYHADIICLQEVQSDHF 1289
GTFTVLSYNIL++V+AT+E YSYCPSWALSW YRKQNLLREIVGY ADI+CLQE+QSDHF
Sbjct: 251 GTFTVLSYNILSDVFATSELYSYCPSWALSWPYRKQNLLREIVGYRADIVCLQEIQSDHF 310
Query: 1288 EEFFAPELDKHGYQALYKKKTTEVSNGTAHTVDGCATFFRRERFSHVKKYEVEFNKAAHS 1109
EEFFAPELDKHGYQALYK+KT EV G HT+DGCATFFRR+RFSHVKKYEVEFNKAA S
Sbjct: 311 EEFFAPELDKHGYQALYKRKTNEVYTGNIHTIDGCATFFRRDRFSHVKKYEVEFNKAAQS 370
Query: 1108 LTDALITNNPGLSRKTCLNRLLKDNVALIAVLEAKFNNHGTD--AKRQLLCVANTHVHVN 935
LTDA++ P +KT LNRL+KDNVALIAVLEAKF+ G D KRQLLCVANTH++V+
Sbjct: 371 LTDAVV---PSAQKKTALNRLVKDNVALIAVLEAKFSYQGADIPGKRQLLCVANTHINVH 427
Query: 934 QDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLAMGKVEQMHPDLT 755
Q+LKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLAMGKV+ MHPDL
Sbjct: 428 QELKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLAMGKVDPMHPDLA 487
Query: 754 IDPLGIVHPPAKLSHQLPLVSAYSSFARSRAP-GLEQQRMRTDLTTNEPLFTYCTRDFIC 578
IDPLGI+ P +KL+HQLPLVSAYSSFAR GLEQQR R D +TNEPLFT+CTRDFI
Sbjct: 488 IDPLGILRPASKLTHQLPLVSAYSSFARMGVGIGLEQQRRRLDPSTNEPLFTHCTRDFIG 547
Query: 577 TVDYIFYTANXXXXXXXXXXXXXXXLRKDTALPSPEWSSDHIALLAEF 434
T+DYIFYTA+ LRKDTALPSPEWSSDHIALLAEF
Sbjct: 548 TLDYIFYTADSLTVESLLELLDEDSLRKDTALPSPEWSSDHIALLAEF 595
>emb|CAN73496.1| hypothetical protein VITISV_044263 [Vitis vinifera]
Length = 603
Score = 683 bits (1763), Expect = 0.0
Identities = 358/528 (67%), Positives = 392/528 (74%), Gaps = 28/528 (5%)
Frame = -2
Query: 1933 DAWQHHRVLHDRPXXXXXXXXXXXXXELFGRL-----------------------GSAPV 1823
DAWQHHRVLHDR LFGR GSAP+
Sbjct: 100 DAWQHHRVLHDRAASAVNENGNEEEE-LFGRFNSTGSGSINTSLAPSASSASLANGSAPL 158
Query: 1822 YPTA--EKTSGEIWFEVGRSKTYTPTVDDIGHVLKFECXXXXXXXXXXXXXXXXXXXXXH 1649
YP A +++ GE WFEVGRSKTYTPT DDIGHVLK
Sbjct: 159 YPAAVTQRSGGETWFEVGRSKTYTPTADDIGHVLK------------------------- 193
Query: 1648 VLKFECVAVDAETKLPVGHAKAILTSRVIPAPTPTPRRLIPVDGIDMTSHLDLDGHTASS 1469
FECV VDAETKL VGH ILTSRVIPAP+PTPR LI V G+DM HLD DG +S+
Sbjct: 194 ---FECVVVDAETKLTVGHGSNILTSRVIPAPSPTPRHLISVSGVDMVGHLDSDGRISSA 250
Query: 1468 GTFTVLSYNILAEVYATTESYSYCPSWALSWSYRKQNLLREIVGYHADIICLQEVQSDHF 1289
GTFTVLSYNIL++V+AT+E YSYCPSWALSW YRKQNLLREIVGY ADI+CLQE+QSDHF
Sbjct: 251 GTFTVLSYNILSDVFATSELYSYCPSWALSWPYRKQNLLREIVGYRADIVCLQEIQSDHF 310
Query: 1288 EEFFAPELDKHGYQALYKKKTTEVSNGTAHTVDGCATFFRRERFSHVKKYEVEFNKAAHS 1109
EEFFAPELDKHGYQALYK+KT EV G HT+DGCATFFRR+RFSHVKKYEVEFNKAA S
Sbjct: 311 EEFFAPELDKHGYQALYKRKTNEVYTGNIHTIDGCATFFRRDRFSHVKKYEVEFNKAAQS 370
Query: 1108 LTDALITNNPGLSRKTCLNRLLKDNVALIAVLEAKFNNHGTD--AKRQLLCVANTHVHVN 935
LTDA++ P +KT LNRL+KDNVALIAVLEAKF+ G D KRQLLCVANTH++V+
Sbjct: 371 LTDAVV---PSAQKKTALNRLVKDNVALIAVLEAKFSYQGADIPGKRQLLCVANTHINVH 427
Query: 934 QDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLAMGKVEQMHPDLT 755
Q+LKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLAMGKV+ MHPDL
Sbjct: 428 QELKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLAMGKVDPMHPDLA 487
Query: 754 IDPLGIVHPPAKLSHQLPLVSAYSSFARSRAP-GLEQQRMRTDLTTNEPLFTYCTRDFIC 578
IDPLGI+ P +KL+HQLPLVSAYSSFAR GLEQQR R D +TNEPLFT+CTRDFI
Sbjct: 488 IDPLGILRPASKLTHQLPLVSAYSSFARMGVGIGLEQQRRRLDPSTNEPLFTHCTRDFIG 547
Query: 577 TVDYIFYTANXXXXXXXXXXXXXXXLRKDTALPSPEWSSDHIALLAEF 434
T+DYIFYTA+ LRKDTALPSPEWSSDHIALLAEF
Sbjct: 548 TLDYIFYTADSLTVESLLELLDEDSLRKDTALPSPEWSSDHIALLAEF 595
>ref|XP_002323345.1| predicted protein [Populus trichocarpa] gi|118486421|gb|ABK95050.1|
unknown [Populus trichocarpa] gi|222867975|gb|EEF05106.1|
predicted protein [Populus trichocarpa]
Length = 603
Score = 676 bits (1743), Expect = 0.0
Identities = 354/528 (67%), Positives = 391/528 (74%), Gaps = 28/528 (5%)
Frame = -2
Query: 1933 DAWQHHRVLHDRPXXXXXXXXXXXXXELFGRL-----------------------GSAPV 1823
DAWQHHRVLHDR LFGR GS P+
Sbjct: 100 DAWQHHRVLHDRAASAINENGNEEEE-LFGRFNSSGSGVMNTSLSGSASSASLTNGSTPL 158
Query: 1822 YPTA--EKTSGEIWFEVGRSKTYTPTVDDIGHVLKFECXXXXXXXXXXXXXXXXXXXXXH 1649
YP A +++ GE WFEVGRSKTYTP+ DDIGHVLK
Sbjct: 159 YPAAVTQRSGGETWFEVGRSKTYTPSADDIGHVLK------------------------- 193
Query: 1648 VLKFECVAVDAETKLPVGHAKAILTSRVIPAPTPTPRRLIPVDGIDMTSHLDLDGHTASS 1469
FECV VDAETKLPVGH+ +LTSRVIPAP+PTPRRLI V G+D + LD DG +SS
Sbjct: 194 ---FECVVVDAETKLPVGHSNTLLTSRVIPAPSPTPRRLISVSGLDAMAPLDSDGRISSS 250
Query: 1468 GTFTVLSYNILAEVYATTESYSYCPSWALSWSYRKQNLLREIVGYHADIICLQEVQSDHF 1289
GTFTVLSYNIL++VYAT ++YSYCPSWALSW YR+QNLLREIVGY ADI+CLQEVQSDH+
Sbjct: 251 GTFTVLSYNILSDVYATNDTYSYCPSWALSWPYRRQNLLREIVGYRADIVCLQEVQSDHY 310
Query: 1288 EEFFAPELDKHGYQALYKKKTTEVSNGTAHTVDGCATFFRRERFSHVKKYEVEFNKAAHS 1109
EEFFAPELDKHGYQALYK+KT EV N HT+DGCATFFRR+RFSHVKKYEVEFNKAA S
Sbjct: 311 EEFFAPELDKHGYQALYKRKTNEVYNINTHTIDGCATFFRRDRFSHVKKYEVEFNKAAQS 370
Query: 1108 LTDALITNNPGLSRKTCLNRLLKDNVALIAVLEAKFNNHGTD--AKRQLLCVANTHVHVN 935
LTDAL+ P RKT LNRL+KDNVALI VLEAKF+N G D KRQLLCVANTH++V+
Sbjct: 371 LTDALV---PSAQRKTALNRLVKDNVALIVVLEAKFSNQGADNPGKRQLLCVANTHINVH 427
Query: 934 QDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLAMGKVEQMHPDLT 755
QDLKDVKLWQV TLLKGLEKIAASADIPMLVCGDFNSVPGSAPH+LLAMGKV+Q+HPDL
Sbjct: 428 QDLKDVKLWQVLTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHSLLAMGKVDQLHPDLV 487
Query: 754 IDPLGIVHPPAKLSHQLPLVSAYSSFAR-SRAPGLEQQRMRTDLTTNEPLFTYCTRDFIC 578
+DPLGI+ P +KL+HQLPLVSAYSSFAR G +QQR R D TTNEPLFT CTRDFI
Sbjct: 488 VDPLGILRPHSKLTHQLPLVSAYSSFARVGVGLGSDQQRRRMDATTNEPLFTNCTRDFIG 547
Query: 577 TVDYIFYTANXXXXXXXXXXXXXXXLRKDTALPSPEWSSDHIALLAEF 434
T+DYIFYTA+ LRKDTALPSPEWSSDHIALLAEF
Sbjct: 548 TLDYIFYTADSLTVESLLELLDEESLRKDTALPSPEWSSDHIALLAEF 595
>ref|XP_002531170.1| carbon catabolite repressor protein, putative [Ricinus communis]
gi|223529240|gb|EEF31213.1| carbon catabolite repressor
protein, putative [Ricinus communis]
Length = 603
Score = 674 bits (1740), Expect = 0.0
Identities = 353/528 (66%), Positives = 393/528 (74%), Gaps = 28/528 (5%)
Frame = -2
Query: 1933 DAWQHHRVLHDRPXXXXXXXXXXXXXELFGRL-----------------------GSAPV 1823
DAWQHHRVLHDR +FGR GSAP+
Sbjct: 100 DAWQHHRVLHDRAASAVSENGNDEEE-VFGRFNSTGSGVLNTSLSSSASTASLTNGSAPL 158
Query: 1822 YPTA--EKTSGEIWFEVGRSKTYTPTVDDIGHVLKFECXXXXXXXXXXXXXXXXXXXXXH 1649
YP A +++ GE WFEVGRSKTYTP+ DDIGHVLK
Sbjct: 159 YPAAVAQRSGGETWFEVGRSKTYTPSADDIGHVLK------------------------- 193
Query: 1648 VLKFECVAVDAETKLPVGHAKAILTSRVIPAPTPTPRRLIPVDGIDMTSHLDLDGHTASS 1469
FECV VDAE+KLPVGH ILTSRVIPAP+PTPRRLIPV GID+ HLD DG +SS
Sbjct: 194 ---FECVVVDAESKLPVGHPNTILTSRVIPAPSPTPRRLIPVSGIDVMGHLDSDGRISSS 250
Query: 1468 GTFTVLSYNILAEVYATTESYSYCPSWALSWSYRKQNLLREIVGYHADIICLQEVQSDHF 1289
GTFTVLSYNIL++VYAT+E+YSYCPSWALSW YR+QNLLREIVGY ADI+CLQEVQ+DH+
Sbjct: 251 GTFTVLSYNILSDVYATSETYSYCPSWALSWPYRRQNLLREIVGYRADIVCLQEVQNDHY 310
Query: 1288 EEFFAPELDKHGYQALYKKKTTEVSNGTAHTVDGCATFFRRERFSHVKKYEVEFNKAAHS 1109
EEFFAPELDKHGYQALYK+KT EV +G + T+DGCATFFRR+RFSHVKKYEVEFNKAA S
Sbjct: 311 EEFFAPELDKHGYQALYKRKTNEVYSGNSPTIDGCATFFRRDRFSHVKKYEVEFNKAAQS 370
Query: 1108 LTDALITNNPGLSRKTCLNRLLKDNVALIAVLEAKFNNHGTD--AKRQLLCVANTHVHVN 935
LT+A++ P RKT LNRL+KDNVALI VLEAKF+N G D KRQLLCVANTHV+++
Sbjct: 371 LTEAVV---PSAQRKTALNRLVKDNVALIVVLEAKFSNQGADNPGKRQLLCVANTHVNIH 427
Query: 934 QDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLAMGKVEQMHPDLT 755
DLKDVKLWQV TLLKGLEKIAASADIPMLVCGDFNS+PGSAPH+LLAMGKV+ +HPDL
Sbjct: 428 HDLKDVKLWQVLTLLKGLEKIAASADIPMLVCGDFNSMPGSAPHSLLAMGKVDPLHPDLV 487
Query: 754 IDPLGIVHPPAKLSHQLPLVSAYSSFAR-SRAPGLEQQRMRTDLTTNEPLFTYCTRDFIC 578
IDPLGI+ P +KL+HQLPLVSAYSSFAR GLEQQR R D TNEPLFT CTRDFI
Sbjct: 488 IDPLGILRPHSKLTHQLPLVSAYSSFARLGVGLGLEQQRRRMDPATNEPLFTNCTRDFIG 547
Query: 577 TVDYIFYTANXXXXXXXXXXXXXXXLRKDTALPSPEWSSDHIALLAEF 434
T+DYIFYTA+ LRKDTALPSPEWSSDHIALLAEF
Sbjct: 548 TLDYIFYTADSLTVESLLELLDEESLRKDTALPSPEWSSDHIALLAEF 595
>ref|XP_002308351.1| predicted protein [Populus trichocarpa] gi|222854327|gb|EEE91874.1|
predicted protein [Populus trichocarpa]
Length = 602
Score = 671 bits (1732), Expect = 0.0
Identities = 354/527 (67%), Positives = 386/527 (73%), Gaps = 27/527 (5%)
Frame = -2
Query: 1933 DAWQHHRVLHDRPXXXXXXXXXXXXXELFGRL-----------------------GSAPV 1823
DAWQHHRVLHDR LFGR GS P+
Sbjct: 100 DAWQHHRVLHDRAASAVNENGNEEEE-LFGRYNSSGSGVLNTSLSGSASSASLTNGSTPL 158
Query: 1822 YPTA-EKTSGEIWFEVGRSKTYTPTVDDIGHVLKFECXXXXXXXXXXXXXXXXXXXXXHV 1646
YP A + SGE WFEVGRSK YTP+ DDIGHVLK
Sbjct: 159 YPAAVTQRSGETWFEVGRSKIYTPSADDIGHVLK-------------------------- 192
Query: 1645 LKFECVAVDAETKLPVGHAKAILTSRVIPAPTPTPRRLIPVDGIDMTSHLDLDGHTASSG 1466
FECV VDAETKLPVGH +LTSRVIPAP+PTPRRLIPV G+D LDLDG +S+G
Sbjct: 193 --FECVVVDAETKLPVGHPNTLLTSRVIPAPSPTPRRLIPVSGLDAMVPLDLDGRISSTG 250
Query: 1465 TFTVLSYNILAEVYATTESYSYCPSWALSWSYRKQNLLREIVGYHADIICLQEVQSDHFE 1286
TFTVLSYNIL++VYAT E+YSYCPSWALSW YR+QNLLREIVGY ADI+CLQEVQSDH+E
Sbjct: 251 TFTVLSYNILSDVYATNETYSYCPSWALSWPYRRQNLLREIVGYRADIVCLQEVQSDHYE 310
Query: 1285 EFFAPELDKHGYQALYKKKTTEVSNGTAHTVDGCATFFRRERFSHVKKYEVEFNKAAHSL 1106
EFFAPELDKHGYQALYK+KT EV G HT+DGCATFFRR+RFSHVKKYEVEFNKAA SL
Sbjct: 311 EFFAPELDKHGYQALYKRKTNEVYAGNTHTIDGCATFFRRDRFSHVKKYEVEFNKAAQSL 370
Query: 1105 TDALITNNPGLSRKTCLNRLLKDNVALIAVLEAKFNNHGTD--AKRQLLCVANTHVHVNQ 932
TDAL+ P RKT LNRL+KDNVALI VLEAKF+N G D KRQLLCVANTH++V+Q
Sbjct: 371 TDALV---PSAQRKTALNRLVKDNVALIVVLEAKFSNQGVDNPGKRQLLCVANTHINVHQ 427
Query: 931 DLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLAMGKVEQMHPDLTI 752
DLKDVKLWQV TLLKGLEKIAASADIPMLVCGDFNSVPGSAPH+LLAMGKV+ +HPDL +
Sbjct: 428 DLKDVKLWQVLTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHSLLAMGKVDPLHPDLVV 487
Query: 751 DPLGIVHPPAKLSHQLPLVSAYSSFAR-SRAPGLEQQRMRTDLTTNEPLFTYCTRDFICT 575
DPLGI+ P KL+HQLPLVSAYSSFAR G +QQR R D TTNEPLFT CTRDFI
Sbjct: 488 DPLGILRPHNKLTHQLPLVSAYSSFARVGVGLGSDQQRRRMDATTNEPLFTNCTRDFIGA 547
Query: 574 VDYIFYTANXXXXXXXXXXXXXXXLRKDTALPSPEWSSDHIALLAEF 434
+DYIFYTA+ LRKDTALPSPEWSSDHIALLAEF
Sbjct: 548 LDYIFYTADSLMVESLLELLDEESLRKDTALPSPEWSSDHIALLAEF 594