BLASTX nr result

ID: Coptis25_contig00008236 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008236
         (1842 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635049.1| PREDICTED: cysteine desulfurase 1, mitochond...   745   0.0  
ref|XP_004143418.1| PREDICTED: cysteine desulfurase 1, mitochond...   740   0.0  
ref|XP_002276621.1| PREDICTED: cysteine desulfurase 1, mitochond...   739   0.0  
ref|XP_002310363.1| predicted protein [Populus trichocarpa] gi|2...   739   0.0  
ref|XP_003611517.1| Cysteine desulfurase [Medicago truncatula] g...   733   0.0  

>ref|XP_003635049.1| PREDICTED: cysteine desulfurase 1, mitochondrial-like [Vitis
            vinifera]
          Length = 454

 Score =  745 bits (1924), Expect = 0.0
 Identities = 364/416 (87%), Positives = 396/416 (95%)
 Frame = -2

Query: 1688 EEEGGISMKGVKISGRPLYLDMQATSPVDPRVLDCMLPYNISLYGNPHSRTHLYGWESDS 1509
            E+  GISMKGVKISGRPLYLDMQATSPVDPRVLD MLPY +S +GNPHSRTHLYGWESD 
Sbjct: 39   EDADGISMKGVKISGRPLYLDMQATSPVDPRVLDAMLPYYLSSFGNPHSRTHLYGWESDL 98

Query: 1508 AVEIARNQVASLVKASPKEIVFTSGATESNNISVKGVMHFYREKKKHVITTQTEHKCVLD 1329
            AVE AR QVA+L+ ASPKEIVFTSGATESNNISVKGVMHFY+EKK+HVITTQTEHKCVLD
Sbjct: 99   AVEKARAQVAALINASPKEIVFTSGATESNNISVKGVMHFYKEKKRHVITTQTEHKCVLD 158

Query: 1328 SCRHLQQEGFDVSYLPVGKDGILDLDLFRKSIRPDTGLVSVMMVNNEIGVIQPMEEIGKI 1149
            SCRHLQQEGF+V+YLPVG DGI+D+D  R +IRPDTGLVSVM VNNEIGVIQP+EEIG I
Sbjct: 159  SCRHLQQEGFEVTYLPVGSDGIVDIDQMRSAIRPDTGLVSVMTVNNEIGVIQPIEEIGNI 218

Query: 1148 CKEFGIPFHTDAAQALGKVPIDVDKMNISLMSLSGHKIYGPKGVGALYMKRRPRIRVEPQ 969
            C+E G+PFHTDAAQALGK+P+DV+KMN+SLMSLSGHKIYGPKGVGALYM+RRPRIRVEPQ
Sbjct: 219  CRELGVPFHTDAAQALGKIPVDVEKMNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPQ 278

Query: 968  MNGGGQERGIRSGTVPTPLVVGMGAACELAMKEMEYDEKRIKGLHERLLNGIRSKIDGVV 789
            MNGGGQERGIRSGTVPTPLVVGMGAACELAMKEMEYD+KRI  L ERLLNGI++K+DGVV
Sbjct: 279  MNGGGQERGIRSGTVPTPLVVGMGAACELAMKEMEYDDKRISDLQERLLNGIKAKLDGVV 338

Query: 788  VNGSTERRYAGNLNISFAYVEGESLLMGLKEVAVSSGSACTSASLEPSYVLRALGVEEDM 609
            VNGS E+RYAGNLN+SFAYVEGESLLMGLKEVAVSSGSACTSASLEPSYVLRALGV+EDM
Sbjct: 339  VNGSKEKRYAGNLNLSFAYVEGESLLMGLKEVAVSSGSACTSASLEPSYVLRALGVDEDM 398

Query: 608  AHTSIRFGIGRFTTEAEVDRAVELTVKQVEKLRDMSPLYEMVKEGIDIKNIQWSQH 441
            AHTSIRFGIGRFTTEAE+DRAVELTV+QVEKLR+MSPLYEMVKEGIDIK+IQW+QH
Sbjct: 399  AHTSIRFGIGRFTTEAEIDRAVELTVQQVEKLREMSPLYEMVKEGIDIKSIQWAQH 454


>ref|XP_004143418.1| PREDICTED: cysteine desulfurase 1, mitochondrial-like isoform 1
            [Cucumis sativus] gi|449451339|ref|XP_004143419.1|
            PREDICTED: cysteine desulfurase 1, mitochondrial-like
            isoform 2 [Cucumis sativus]
            gi|449525720|ref|XP_004169864.1| PREDICTED: LOW QUALITY
            PROTEIN: cysteine desulfurase 1, mitochondrial-like
            [Cucumis sativus]
          Length = 458

 Score =  740 bits (1910), Expect = 0.0
 Identities = 361/416 (86%), Positives = 393/416 (94%)
 Frame = -2

Query: 1688 EEEGGISMKGVKISGRPLYLDMQATSPVDPRVLDCMLPYNISLYGNPHSRTHLYGWESDS 1509
            E+E GISMKGVKISGRPLYLDMQATSPVDPRVLD MLPY IS YGNPHSRTHLYGWESD 
Sbjct: 43   EDETGISMKGVKISGRPLYLDMQATSPVDPRVLDAMLPYYISRYGNPHSRTHLYGWESDH 102

Query: 1508 AVEIARNQVASLVKASPKEIVFTSGATESNNISVKGVMHFYREKKKHVITTQTEHKCVLD 1329
            AVE AR+QVA+L+ ASPKEIVFTSGATESNNIS+KGVMHFYR+KK+H+ITTQTEHKCVLD
Sbjct: 103  AVETARSQVAALIGASPKEIVFTSGATESNNISIKGVMHFYRDKKRHLITTQTEHKCVLD 162

Query: 1328 SCRHLQQEGFDVSYLPVGKDGILDLDLFRKSIRPDTGLVSVMMVNNEIGVIQPMEEIGKI 1149
            SCRHLQQEGF+++YLPVG DGI+DL+  R +IRPDTGLVSVM VNNEIGVIQP+EEIGKI
Sbjct: 163  SCRHLQQEGFEITYLPVGSDGIVDLEKLRSAIRPDTGLVSVMAVNNEIGVIQPVEEIGKI 222

Query: 1148 CKEFGIPFHTDAAQALGKVPIDVDKMNISLMSLSGHKIYGPKGVGALYMKRRPRIRVEPQ 969
            CKEF +PFHTDAAQALGK+PIDV+K N+SLMSLSGHKIYGPKG+GALYM+RRPRIRVEPQ
Sbjct: 223  CKEFNVPFHTDAAQALGKIPIDVEKWNVSLMSLSGHKIYGPKGIGALYMRRRPRIRVEPQ 282

Query: 968  MNGGGQERGIRSGTVPTPLVVGMGAACELAMKEMEYDEKRIKGLHERLLNGIRSKIDGVV 789
            MNGGGQERGIRSGTVPTPLVVGMGAACELAMKEMEYD+KRI  L ERLLNGI +K++GVV
Sbjct: 283  MNGGGQERGIRSGTVPTPLVVGMGAACELAMKEMEYDDKRITALQERLLNGINAKLEGVV 342

Query: 788  VNGSTERRYAGNLNISFAYVEGESLLMGLKEVAVSSGSACTSASLEPSYVLRALGVEEDM 609
            VNGS E RY GNLN+SFAYVEGESLLMGLK+VAVSSGSACTSASLEPSYVLRALGV+EDM
Sbjct: 343  VNGSMENRYPGNLNLSFAYVEGESLLMGLKDVAVSSGSACTSASLEPSYVLRALGVDEDM 402

Query: 608  AHTSIRFGIGRFTTEAEVDRAVELTVKQVEKLRDMSPLYEMVKEGIDIKNIQWSQH 441
            AHTSIRFGIGRFTTEAE+DRAVELTV QVEKLR+MSPLYEMVKEGI+IK IQW+QH
Sbjct: 403  AHTSIRFGIGRFTTEAEIDRAVELTVHQVEKLREMSPLYEMVKEGINIKEIQWAQH 458


>ref|XP_002276621.1| PREDICTED: cysteine desulfurase 1, mitochondrial-like [Vitis
            vinifera]
          Length = 451

 Score =  739 bits (1909), Expect = 0.0
 Identities = 361/416 (86%), Positives = 396/416 (95%)
 Frame = -2

Query: 1688 EEEGGISMKGVKISGRPLYLDMQATSPVDPRVLDCMLPYNISLYGNPHSRTHLYGWESDS 1509
            E+  GISMKGVKISGRPLYLD+QATSPVDPRVLD MLPY +S +GNPHSRTHLYGWES+ 
Sbjct: 36   EDADGISMKGVKISGRPLYLDVQATSPVDPRVLDAMLPYYLSSFGNPHSRTHLYGWESEL 95

Query: 1508 AVEIARNQVASLVKASPKEIVFTSGATESNNISVKGVMHFYREKKKHVITTQTEHKCVLD 1329
            AVE AR QVA+L+ ASPKEIVFTSGATESNNISVKGVMHFY++KK+HVITTQTEHKCVLD
Sbjct: 96   AVEKARAQVAALINASPKEIVFTSGATESNNISVKGVMHFYKDKKRHVITTQTEHKCVLD 155

Query: 1328 SCRHLQQEGFDVSYLPVGKDGILDLDLFRKSIRPDTGLVSVMMVNNEIGVIQPMEEIGKI 1149
            SCRHLQQEGF+V+YLPVG DGI+D+D  R +IRPDTGLVSVM VNNEIGVIQP+EEIGK+
Sbjct: 156  SCRHLQQEGFEVTYLPVGSDGIVDIDQIRSAIRPDTGLVSVMAVNNEIGVIQPIEEIGKM 215

Query: 1148 CKEFGIPFHTDAAQALGKVPIDVDKMNISLMSLSGHKIYGPKGVGALYMKRRPRIRVEPQ 969
            CKE G+PFHTDAAQALGK+PIDV+KMN+SLMSLSGHKIYGPKGVGALYM+RRPRIRVEPQ
Sbjct: 216  CKELGVPFHTDAAQALGKIPIDVEKMNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPQ 275

Query: 968  MNGGGQERGIRSGTVPTPLVVGMGAACELAMKEMEYDEKRIKGLHERLLNGIRSKIDGVV 789
            MNGGGQERGIRSGTVPTPLVVGMGAACELAMKEMEYD++RI  L +RLLNGI +K+DGVV
Sbjct: 276  MNGGGQERGIRSGTVPTPLVVGMGAACELAMKEMEYDDERITALQKRLLNGINAKLDGVV 335

Query: 788  VNGSTERRYAGNLNISFAYVEGESLLMGLKEVAVSSGSACTSASLEPSYVLRALGVEEDM 609
            VNGS ERRYAGNLN+SFAYVEGESLLMGLKEVAVSSGSACTSASLEPSYVLRALGV+EDM
Sbjct: 336  VNGSRERRYAGNLNLSFAYVEGESLLMGLKEVAVSSGSACTSASLEPSYVLRALGVDEDM 395

Query: 608  AHTSIRFGIGRFTTEAEVDRAVELTVKQVEKLRDMSPLYEMVKEGIDIKNIQWSQH 441
            AHTSIRFGIGRFTT+AE+DRAVELTV+QVEKLR+MSPLYEMVKEGIDIK+IQW+QH
Sbjct: 396  AHTSIRFGIGRFTTDAEIDRAVELTVQQVEKLREMSPLYEMVKEGIDIKSIQWAQH 451


>ref|XP_002310363.1| predicted protein [Populus trichocarpa] gi|222853266|gb|EEE90813.1|
            predicted protein [Populus trichocarpa]
          Length = 452

 Score =  739 bits (1907), Expect = 0.0
 Identities = 368/456 (80%), Positives = 406/456 (89%)
 Frame = -2

Query: 1808 MASSKLLITKLNQLRTLTPLISKPFXXXXXXXXXXXXTVVEEEGGISMKGVKISGRPLYL 1629
            MA+SKLL + L   RTLT   S  F               E E  +++KGVKIS RPLYL
Sbjct: 1    MATSKLLASTLR--RTLTT--SSSFRRFSTAAAEAVALASEPEDSMTIKGVKISSRPLYL 56

Query: 1628 DMQATSPVDPRVLDCMLPYNISLYGNPHSRTHLYGWESDSAVEIARNQVASLVKASPKEI 1449
            DMQATSPVDPRVLD MLPY ++ YGNPHSRTHLYGWESD AVE AR+Q+A L+ ASPKEI
Sbjct: 57   DMQATSPVDPRVLDAMLPYYLARYGNPHSRTHLYGWESDQAVETARSQIADLIGASPKEI 116

Query: 1448 VFTSGATESNNISVKGVMHFYREKKKHVITTQTEHKCVLDSCRHLQQEGFDVSYLPVGKD 1269
            VFTSGATESNNISVKGV+ FY+EKK+HV+TTQTEHKCVLDSCRHLQQEGF+V+YLPVG D
Sbjct: 117  VFTSGATESNNISVKGVIKFYKEKKRHVVTTQTEHKCVLDSCRHLQQEGFEVTYLPVGND 176

Query: 1268 GILDLDLFRKSIRPDTGLVSVMMVNNEIGVIQPMEEIGKICKEFGIPFHTDAAQALGKVP 1089
            GI+DL+  + SIRPDTGLVSVM VNNEIGVIQPMEEIG+ICKE  +PFHTDAAQALGK+P
Sbjct: 177  GIVDLEKLKGSIRPDTGLVSVMAVNNEIGVIQPMEEIGEICKELNVPFHTDAAQALGKIP 236

Query: 1088 IDVDKMNISLMSLSGHKIYGPKGVGALYMKRRPRIRVEPQMNGGGQERGIRSGTVPTPLV 909
            IDVDK N+SLMSLSGHKIYGPKGVGALYM+RRPRIRVEPQMNGGGQERGIRSGTVPTPLV
Sbjct: 237  IDVDKWNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPQMNGGGQERGIRSGTVPTPLV 296

Query: 908  VGMGAACELAMKEMEYDEKRIKGLHERLLNGIRSKIDGVVVNGSTERRYAGNLNISFAYV 729
            VGMGAACELA KEMEYD+KRI+ LHER+LNG+R+K+DGVVVNGS ERRYAGNLN+SFAYV
Sbjct: 297  VGMGAACELAKKEMEYDDKRIRALHERMLNGVRAKLDGVVVNGSVERRYAGNLNLSFAYV 356

Query: 728  EGESLLMGLKEVAVSSGSACTSASLEPSYVLRALGVEEDMAHTSIRFGIGRFTTEAEVDR 549
            EGESLLMGLK+VAVSSGSACTSASLEPSYVLRALGV+EDMAHTSIRFGIGRFTTE E+DR
Sbjct: 357  EGESLLMGLKDVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEEEIDR 416

Query: 548  AVELTVKQVEKLRDMSPLYEMVKEGIDIKNIQWSQH 441
            A+ELTV+QVEKLR+MSPLYEMVKEGIDIK IQW+QH
Sbjct: 417  AIELTVQQVEKLREMSPLYEMVKEGIDIKQIQWAQH 452


>ref|XP_003611517.1| Cysteine desulfurase [Medicago truncatula]
            gi|355512852|gb|AES94475.1| Cysteine desulfurase
            [Medicago truncatula]
          Length = 454

 Score =  733 bits (1891), Expect = 0.0
 Identities = 354/416 (85%), Positives = 390/416 (93%)
 Frame = -2

Query: 1688 EEEGGISMKGVKISGRPLYLDMQATSPVDPRVLDCMLPYNISLYGNPHSRTHLYGWESDS 1509
            E   GI+MKGVKISGRPLYLD+QATSPVDPRVLD MLP+ +S YGNPHSRTH YGWESD 
Sbjct: 39   ETTAGITMKGVKISGRPLYLDVQATSPVDPRVLDAMLPFYLSRYGNPHSRTHFYGWESDD 98

Query: 1508 AVEIARNQVASLVKASPKEIVFTSGATESNNISVKGVMHFYREKKKHVITTQTEHKCVLD 1329
            A+E AR+QVA+L+ ASPKEIVFTSGATESNNIS+KGV+HFY+EKKKHVITTQTEHKCVLD
Sbjct: 99   AIEHARSQVAALISASPKEIVFTSGATESNNISIKGVLHFYKEKKKHVITTQTEHKCVLD 158

Query: 1328 SCRHLQQEGFDVSYLPVGKDGILDLDLFRKSIRPDTGLVSVMMVNNEIGVIQPMEEIGKI 1149
            SCRHLQQEGFDV+YLPV  DG++DL+  R +IRPDTGLVSVM VNNEIGV+QPMEEIGKI
Sbjct: 159  SCRHLQQEGFDVTYLPVESDGLVDLEKLRSAIRPDTGLVSVMAVNNEIGVVQPMEEIGKI 218

Query: 1148 CKEFGIPFHTDAAQALGKVPIDVDKMNISLMSLSGHKIYGPKGVGALYMKRRPRIRVEPQ 969
            CKEFG+ FHTDAAQALGK+P+DVDK N+SLMSLSGHK+YGPKGVGALYM+RRPRIRVEPQ
Sbjct: 219  CKEFGVAFHTDAAQALGKIPVDVDKWNVSLMSLSGHKVYGPKGVGALYMRRRPRIRVEPQ 278

Query: 968  MNGGGQERGIRSGTVPTPLVVGMGAACELAMKEMEYDEKRIKGLHERLLNGIRSKIDGVV 789
            MNGGGQERGIRSGT+PTPLVVGMGAACE+A+KEMEYDEKRI  L +RLLNGIR K+DGVV
Sbjct: 279  MNGGGQERGIRSGTLPTPLVVGMGAACEVALKEMEYDEKRISALQQRLLNGIRDKLDGVV 338

Query: 788  VNGSTERRYAGNLNISFAYVEGESLLMGLKEVAVSSGSACTSASLEPSYVLRALGVEEDM 609
            VNGS ERRY GNLN+SFAYVEGESLLMGLKEVAVSSGSACTSASLEPSYVLRALGVEEDM
Sbjct: 339  VNGSMERRYVGNLNLSFAYVEGESLLMGLKEVAVSSGSACTSASLEPSYVLRALGVEEDM 398

Query: 608  AHTSIRFGIGRFTTEAEVDRAVELTVKQVEKLRDMSPLYEMVKEGIDIKNIQWSQH 441
            AHTSIRFGIGRFTTE E+DRAV+LTV+QVEKLRDMSPLYEM+KEGI+IK+I+W QH
Sbjct: 399  AHTSIRFGIGRFTTEEEIDRAVQLTVQQVEKLRDMSPLYEMMKEGINIKDIKWDQH 454


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