BLASTX nr result

ID: Coptis25_contig00008232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008232
         (829 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34931.3| unnamed protein product [Vitis vinifera]              115   1e-23
ref|XP_002278536.1| PREDICTED: uncharacterized protein At4g28440...   115   1e-23
ref|XP_002525380.1| conserved hypothetical protein [Ricinus comm...   114   2e-23
gb|AFK38857.1| unknown [Lotus japonicus]                              114   3e-23
ref|XP_002317479.1| predicted protein [Populus trichocarpa] gi|2...   114   3e-23

>emb|CBI34931.3| unnamed protein product [Vitis vinifera]
          Length = 73

 Score =  115 bits (288), Expect = 1e-23
 Identities = 57/61 (93%), Positives = 59/61 (96%)
 Frame = -1

Query: 829 VFTARNDQVDLMKAGTTVILRNAKIDMFKGSMRLAVDKWGRVEVSEPASFTVKEDNNLSL 650
           VFTARNDQVDLMK  TTVILRNAKIDMFKGSMRLAVDKWGRVEV+EPASFTVKEDNNLSL
Sbjct: 3   VFTARNDQVDLMKPDTTVILRNAKIDMFKGSMRLAVDKWGRVEVTEPASFTVKEDNNLSL 62

Query: 649 I 647
           +
Sbjct: 63  V 63


>ref|XP_002278536.1| PREDICTED: uncharacterized protein At4g28440 [Vitis vinifera]
          Length = 137

 Score =  115 bits (288), Expect = 1e-23
 Identities = 57/61 (93%), Positives = 59/61 (96%)
 Frame = -1

Query: 829 VFTARNDQVDLMKAGTTVILRNAKIDMFKGSMRLAVDKWGRVEVSEPASFTVKEDNNLSL 650
           VFTARNDQVDLMK  TTVILRNAKIDMFKGSMRLAVDKWGRVEV+EPASFTVKEDNNLSL
Sbjct: 67  VFTARNDQVDLMKPDTTVILRNAKIDMFKGSMRLAVDKWGRVEVTEPASFTVKEDNNLSL 126

Query: 649 I 647
           +
Sbjct: 127 V 127


>ref|XP_002525380.1| conserved hypothetical protein [Ricinus communis]
           gi|223535343|gb|EEF37018.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 136

 Score =  114 bits (286), Expect = 2e-23
 Identities = 56/61 (91%), Positives = 59/61 (96%)
 Frame = -1

Query: 829 VFTARNDQVDLMKAGTTVILRNAKIDMFKGSMRLAVDKWGRVEVSEPASFTVKEDNNLSL 650
           +FTARNDQVDLMK G+TV LRNAKIDMFKGSMRLAVDKWGRVEV+EPASFTVKEDNNLSL
Sbjct: 66  IFTARNDQVDLMKEGSTVTLRNAKIDMFKGSMRLAVDKWGRVEVTEPASFTVKEDNNLSL 125

Query: 649 I 647
           I
Sbjct: 126 I 126


>gb|AFK38857.1| unknown [Lotus japonicus]
          Length = 136

 Score =  114 bits (285), Expect = 3e-23
 Identities = 54/61 (88%), Positives = 60/61 (98%)
 Frame = -1

Query: 829 VFTARNDQVDLMKAGTTVILRNAKIDMFKGSMRLAVDKWGRVEVSEPASFTVKEDNNLSL 650
           +FTARNDQVDLMK G+TV++RNAKIDM+KGSMRLAVDKWGRVEV+EPASFTVKEDNNLSL
Sbjct: 67  IFTARNDQVDLMKEGSTVVMRNAKIDMYKGSMRLAVDKWGRVEVAEPASFTVKEDNNLSL 126

Query: 649 I 647
           I
Sbjct: 127 I 127


>ref|XP_002317479.1| predicted protein [Populus trichocarpa] gi|222860544|gb|EEE98091.1|
           predicted protein [Populus trichocarpa]
          Length = 155

 Score =  114 bits (285), Expect = 3e-23
 Identities = 55/61 (90%), Positives = 58/61 (95%)
 Frame = -1

Query: 829 VFTARNDQVDLMKAGTTVILRNAKIDMFKGSMRLAVDKWGRVEVSEPASFTVKEDNNLSL 650
           +FTARNDQVDLMK GTTVILRNAKIDMFKGSMRLAVDKWGRVEV+EPA F VKEDNNLSL
Sbjct: 85  IFTARNDQVDLMKPGTTVILRNAKIDMFKGSMRLAVDKWGRVEVTEPAEFVVKEDNNLSL 144

Query: 649 I 647
           +
Sbjct: 145 V 145


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